MGE detailed information
MGE type: Genomic_island MGE length: 23701 bp
Accession: NZ_CP019944 Location: 276913..300613 Organism: Escherichia coli strain DSM 103246 Replicon: chromosome
Accession: NZ_CP019944 Location: 276913..300613 Organism: Escherichia coli strain DSM 103246 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Eco28_RS01270 () | 272125..272835 | + | 711 | WP_000729928.1 | ribulose-phosphate 3-epimerase | - |
| Eco28_RS01275 () | 272832..273389 | + | 558 | WP_000121948.1 | SIS domain-containing protein | - |
| Eco28_RS01280 () | 273470..274120 | + | 651 | WP_072686254.1 | HAD-IA family hydrolase | - |
| Eco28_RS01285 () | 274284..275375 | - | 1092 | WP_023308441.1 | glycerol dehydrogenase | - |
| Eco28_RS01290 () | 275433..275720 | - | 288 | WP_023308440.1 | HPr family phosphocarrier protein | - |
| Eco28_RS01295 () | 275723..276895 | - | 1173 | WP_000832388.1 | mannitol dehydrogenase | - |
| Eco28_RS01300 () | 276913..277611 | - | 699 | WP_000642325.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| Eco28_RS01305 () | 277652..278080 | - | 429 | WP_000200620.1 | PTS sugar transporter subunit IIA | - |
| Eco28_RS01310 () | 278077..279543 | - | 1467 | WP_001572029.1 | PTS mannitol transporter subunit IICB | - |
| Eco28_RS01315 () | 279571..280380 | - | 810 | WP_000371719.1 | putative oxidoreductase | VF |
| Eco28_RS01320 () | 280767..282239 | - | 1473 | WP_001098653.1 | dipeptide/tripeptide permease DtpB | - |
| Eco28_RS28560 () | 282405..282458 | + | 54 | WP_212734132.1 | hypothetical protein | - |
| Eco28_RS01330 () | 282557..282991 | - | 435 | WP_000323571.1 | universal stress protein UspA | - |
| Eco28_RS01335 () | 283382..283717 | + | 336 | WP_000626187.1 | universal stress protein UspB | - |
| Eco28_RS01340 () | 283788..285287 | - | 1500 | WP_000902780.1 | inorganic phosphate transporter PitA | - |
| Eco28_RS01345 () | 285519..286721 | + | 1203 | WP_000439188.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| Eco28_RS01350 () | 287038..288000 | - | 963 | Protein_245 | DUF2776 family protein | - |
| Eco28_RS01355 () | 288010..289218 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| Eco28_RS27920 () | 289288..289428 | - | 141 | WP_196219910.1 | DUF2776 family protein | - |
| Eco28_RS01370 () | 289811..291400 | + | 1590 | WP_073313240.1 | DUF4049 domain-containing protein | - |
| Eco28_RS01380 () | 291806..293034 | + | 1229 | WP_116315299.1 | IS3 family transposase IS2 | Transposase |
| Eco28_RS01385 () | 293058..294620 | + | 1563 | WP_080029915.1 | DUF4049 domain-containing protein | - |
| Eco28_RS28565 () | 294810..294923 | + | 114 | WP_212736213.1 | hypothetical protein | - |
| Eco28_RS01390 () | 294986..296053 | + | 1068 | WP_000361517.1 | HlyD family secretion protein | - |
| Eco28_RS01395 () | 296050..298785 | + | 2736 | WP_072686258.1 | Ribosome-associated ATPase | VF |
| Eco28_RS01400 () | 298785..299909 | + | 1125 | WP_001314210.1 | ABC transporter permease | - |
| Eco28_RS01405 () | 299982..300257 | + | 276 | WP_072686259.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| Eco28_RS01410 () | 300254..300613 | + | 360 | WP_000593554.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| Eco28_RS01415 () | 300733..301134 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| Eco28_RS01420 () | 301140..301946 | - | 807 | WP_032288306.1 | nickel import ATP-binding protein NikE | - |
| Eco28_RS01425 () | 301943..302707 | - | 765 | WP_047644476.1 | nickel import ATP-binding protein NikD | - |
| Eco28_RS01430 () | 302707..303540 | - | 834 | WP_072686260.1 | nickel ABC transporter permease subunit NikC | - |
| Eco28_RS01435 () | 303537..304481 | - | 945 | WP_000947082.1 | nickel ABC transporter permease subunit NikB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|