MGE detailed information
MGE type: Conjugative plasmid MGE length: 68786 bp
Accession: NZ_CP019910 Location: 1..68786 Organism: Escherichia coli strain MDR_56 Replicon: plasmid unnamed4
Accession: NZ_CP019910 Location: 1..68786 Organism: Escherichia coli strain MDR_56 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1200_RS28760 () | 660..1226 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| B1200_RS28765 () | 1248..1559 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| B1200_RS28770 () | 1574..1933 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| B1200_RS28775 () | 1966..2193 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| B1200_RS28780 () | 2330..3001 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| B1200_RS28785 () | 3195..3578 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| B1200_RS28790 () | 3934..4503 | + | 570 | Protein_7 | hypothetical protein | VF |
| B1200_RS28795 () | 4801..5622 | - | 822 | WP_001234451.1 | DUF945 domain-containing protein | - |
| B1200_RS28800 () | 5728..6023 | - | 296 | Protein_9 | hypothetical protein | - |
| B1200_RS28815 () | 6957..7115 | - | 159 | WP_024200877.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 7167..7315 | - | 149 | NuclAT_0 | - | - |
| - () | 7167..7315 | - | 149 | NuclAT_0 | - | - |
| - () | 7167..7315 | - | 149 | NuclAT_0 | - | - |
| - () | 7167..7315 | - | 149 | NuclAT_0 | - | - |
| B1200_RS28825 () | 7291..7809 | - | 519 | WP_001178554.1 | hypothetical protein | - |
| B1200_RS28830 () | 7809..8528 | - | 720 | WP_064578944.1 | plasmid SOS inhibition protein A | - |
| B1200_RS28835 () | 8525..8959 | - | 435 | WP_000845930.1 | conjugation system SOS inhibitor PsiB | - |
| B1200_RS28840 () | 9014..10972 | - | 1959 | WP_078081143.1 | ParB/RepB/Spo0J family partition protein | - |
| B1200_RS28845 () | 11036..11269 | - | 234 | WP_000005998.1 | DUF905 family protein | - |
| B1200_RS28850 () | 11327..11863 | - | 537 | WP_000290806.1 | single-stranded DNA-binding protein | - |
| B1200_RS28870 () | 12723..13286 | - | 564 | WP_021559004.1 | class I SAM-dependent methyltransferase | - |
| B1200_RS28875 () | 13333..14694 | - | 1362 | WP_021559003.1 | DUF3560 domain-containing protein | - |
| B1200_RS28880 () | 14746..14976 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| B1200_RS30400 () | 15490..16024 | + | 535 | Protein_20 | hypothetical protein | - |
| B1200_RS28895 () | 16003..16194 | - | 192 | WP_001027506.1 | hypothetical protein | - |
| B1200_RS28900 () | 16191..16613 | - | 423 | WP_032302465.1 | DUF1380 family protein | - |
| B1200_RS28905 () | 16660..16962 | - | 303 | WP_014653258.1 | antirestriction protein | - |
| B1200_RS30230 () | 17503..18279 | - | 777 | WP_001742990.1 | hypothetical protein | - |
| B1200_RS28920 () | 18330..18764 | - | 435 | WP_078081145.1 | DUF1380 family protein | - |
| B1200_RS28925 () | 18778..18999 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| B1200_RS28930 () | 19000..19683 | - | 684 | WP_000086172.1 | DNA methylase | - |
| B1200_RS28935 () | 19759..20070 | - | 312 | WP_021018648.1 | hypothetical protein | - |
| B1200_RS28940 () | 20067..20969 | - | 903 | WP_001425207.1 | DUF1281 domain-containing protein | - |
| B1200_RS30235 () | 21095..21289 | + | 195 | WP_000456743.1 | hypothetical protein | - |
| B1200_RS28950 () | 21491..22453 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| B1200_RS28955 () | 22456..22806 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| B1200_RS28960 () | 22912..23616 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| B1200_RS28965 () | 23680..24285 | + | 606 | Protein_34 | translesion error-prone DNA polymerase V subunit MucB | - |
| B1200_RS28970 () | 24436..24843 | + | 408 | Protein_35 | SprT-like domain-containing protein | - |
| B1200_RS28975 () | 24969..25394 | + | 426 | WP_063277905.1 | fosfomycin resistance glutathione transferase FosA8 | - |
| B1200_RS28980 () | 25461..25637 | - | 177 | Protein_37 | alpha/beta hydrolase | - |
| B1200_RS28985 () | 25639..26025 | + | 387 | Protein_38 | sprT domain-containing protein | - |
| B1200_RS28990 () | 26040..26381 | - | 342 | WP_000057569.1 | hypothetical protein | - |
| B1200_RS28995 () | 26941..27660 | + | 720 | WP_001749982.1 | replication initiation protein | - |
| B1200_RS29000 () | 29617..30054 | - | 438 | Protein_41 | recombinase family protein | - |
| B1200_RS29010 () | 30108..30812 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| B1200_RS29015 () | 30877..31170 | + | 294 | Protein_43 | mobilization protein MobA | - |
| B1200_RS29020 () | 31245..31949 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| B1200_RS29030 () | 32043..32324 | - | 282 | WP_000969983.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B1200_RS29035 () | 32321..32590 | - | 270 | WP_000079943.1 | hypothetical protein | Antitoxin Detail |
| B1200_RS29045 () | 33503..34360 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| B1200_RS29050 () | 34353..34427 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| B1200_RS29060 () | 34665..34919 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| B1200_RS29065 () | 35159..35749 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| B1200_RS29070 () | 35787..35996 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| B1200_RS29075 () | 36042..36503 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| B1200_RS29080 () | 36748..36960 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| B1200_RS29085 () | 37089..37649 | - | 561 | WP_078081146.1 | fertility inhibition protein FinO | - |
| B1200_RS29090 () | 37752..38612 | - | 861 | WP_000704513.1 | putative protein YcjY | VF |
| B1200_RS29095 () | 38671..39417 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| B1200_RS29100 () | 39437..44707 | - | 5271 | WP_078081147.1 | Multifunctional conjugation protein TraI | Relaxase |
| B1200_RS29105 () | 44707..47004 | - | 2298 | WP_078081148.1 | Coupling protein TraD | VF |
| B1200_RS29110 () | 47055..47792 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| B1200_RS29115 () | 47995..48726 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| B1200_RS29120 () | 48775..49260 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| B1200_RS29125 () | 49276..52098 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| B1200_RS29130 () | 52095..53468 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| B1200_RS29135 () | 53455..53880 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| B1200_RS29140 () | 53828..54175 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| B1200_RS29145 () | 54105..54650 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| B1200_RS29150 () | 54637..54921 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| B1200_RS29155 () | 55040..55384 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| B1200_RS29160 () | 55398..56141 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| B1200_RS29165 () | 56134..56391 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| B1200_RS29170 () | 56418..58268 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| B1200_RS29175 () | 58265..58903 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| B1200_RS29180 () | 58912..59217 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| B1200_RS29185 () | 59247..60239 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| B1200_RS29190 () | 60236..60868 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| B1200_RS29195 () | 60865..61251 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| B1200_RS29200 () | 61248..63878 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| B1200_RS30240 () | 64004..64351 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| B1200_RS29210 () | 64379..64597 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| B1200_RS29215 () | 64677..65150 | - | 474 | WP_000549568.1 | hypothetical protein | - |
| B1200_RS29220 () | 65143..65556 | - | 414 | WP_000549589.1 | hypothetical protein | - |
| B1200_RS29225 () | 65549..65770 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| B1200_RS29230 () | 65905..66420 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| B1200_RS29235 () | 66417..66785 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| B1200_RS29240 () | 66724..67311 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| B1200_RS29245 () | 67280..68731 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|