MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 125801 bp
Accession: NZ_CP019872 Location: 1..125801 Organism: Pseudomonas syringae pv. tomato strain B13-200 Replicon: plasmid pB13-200A
Accession: NZ_CP019872 Location: 1..125801 Organism: Pseudomonas syringae pv. tomato strain B13-200 Replicon: plasmid pB13-200A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
XJ28_RS30100 () | 98..1248 | + | 1151 | WP_087944905.1 | IS3 family transposase ISMamg1 | Transposase |
XJ28_RS30105 () | 1380..1820 | - | 441 | WP_011347540.1 | carboxymuconolactone decarboxylase family protein | - |
XJ28_RS30115 () | 1948..2712 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
XJ28_RS30120 () | 2768..3082 | - | 315 | Protein_4 | Tn3 family transposase TnpA_ISPa38 | Transposase |
XJ28_RS30130 () | 3286..4968 | + | 1683 | WP_072255600.1 | IS3 family transposase ISNoc1 | Transposase |
XJ28_RS30135 () | 4971..5879 | + | 909 | WP_000393453.1 | TniB family NTP-binding protein | - |
XJ28_RS30140 () | 5876..7012 | + | 1137 | WP_105224128.1 | TniQ family protein | - |
XJ28_RS30145 () | 7067..7348 | + | 282 | WP_015062535.1 | hypothetical protein | - |
XJ28_RS30150 () | 7329..8558 | + | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
XJ28_RS30155 () | 8740..9753 | - | 1014 | Protein_10 | hypothetical protein | VF |
XJ28_RS30160 () | 9810..10517 | - | 708 | WP_004661192.1 | DotI/IcmL/TraM family protein | - |
XJ28_RS30165 () | 10514..10867 | - | 354 | WP_032649095.1 | conjugal transfer protein | - |
XJ28_RS30170 () | 10893..15713 | - | 4821 | WP_105224129.1 | DNA primase | - |
XJ28_RS30175 () | 15756..16043 | - | 288 | WP_004668192.1 | IcmT/TraK family protein | - |
XJ28_RS30180 () | 16072..16317 | - | 246 | WP_004666892.1 | hypothetical protein | - |
XJ28_RS30185 () | 16354..16905 | - | 552 | WP_050426729.1 | Phospholipase D | VF |
XJ28_RS32700 () | 16902..17486 | - | 585 | WP_168199513.1 | hypothetical protein | - |
XJ28_RS30195 () | 17684..18865 | - | 1182 | WP_011106982.1 | Twitching mobility protein | VF |
XJ28_RS30200 () | 18862..19662 | - | 801 | WP_007247253.1 | hypothetical protein | VF |
XJ28_RS30205 () | 19659..20132 | - | 474 | WP_065348691.1 | DotD/TraH family lipoprotein | - |
XJ28_RS30210 () | 20169..20660 | - | 492 | WP_105224130.1 | hypothetical protein | VF |
XJ28_RS30220 () | 20953..21159 | - | 207 | WP_004668200.1 | hypothetical protein | - |
XJ28_RS30225 () | 21248..21760 | - | 513 | WP_105224132.1 | transcriptional regulator | - |
XJ28_RS30230 () | 21976..22347 | + | 372 | WP_057425389.1 | helix-turn-helix domain-containing protein | - |
XJ28_RS30235 () | 22349..22546 | - | 198 | WP_004642338.1 | hypothetical protein | - |
XJ28_RS30240 () | 22597..23568 | - | 972 | WP_105224133.1 | putative D,D-dipeptide transport ATP-binding protein DdpF | VF |
XJ28_RS30245 () | 23565..24551 | - | 987 | WP_057425390.1 | ABC transporter ATP-binding protein | - |
XJ28_RS30250 () | 24554..25429 | - | 876 | WP_102001477.1 | D,D-dipeptide ABC transporter permease | - |
XJ28_RS30255 () | 25431..26447 | - | 1017 | WP_057425386.1 | ABC transporter permease | - |
XJ28_RS30260 () | 26540..28120 | - | 1581 | WP_105224134.1 | ABC transporter substrate-binding protein | - |
XJ28_RS30265 () | 28239..28778 | - | 540 | WP_004642348.1 | D-alanyl-D-alanine dipeptidase | - |
XJ28_RS30270 () | 28816..29676 | - | 861 | WP_004668209.1 | MurR/RpiR family transcriptional regulator | - |
XJ28_RS30275 () | 30023..30277 | + | 255 | WP_002556039.1 | plasmid stabilization protein | Antitoxin Detail |
XJ28_RS30280 () | 30274..30690 | + | 417 | WP_002556038.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
XJ28_RS30285 () | 30952..32907 | - | 1956 | WP_105224135.1 | relaxase/mobilization nuclease domain-containing protein | - |
XJ28_RS30290 () | 32918..33247 | - | 330 | WP_060403683.1 | ribbon-helix-helix protein, CopG family | - |
XJ28_RS30295 () | 33682..33960 | + | 279 | WP_105224136.1 | mobilization protein | - |
XJ28_RS30300 () | 34034..34234 | - | 201 | WP_105224137.1 | hypothetical protein | - |
XJ28_RS30305 () | 34303..35139 | - | 837 | WP_105224138.1 | DUF945 domain-containing protein | - |
XJ28_RS30310 () | 35185..35562 | - | 378 | WP_105224139.1 | hypothetical protein | - |
XJ28_RS30320 () | 36013..36207 | - | 195 | WP_105224140.1 | hypothetical protein | - |
XJ28_RS30330 () | 36989..37609 | + | 621 | WP_010204550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
XJ28_RS30335 () | 37750..37980 | - | 231 | WP_054090700.1 | hypothetical protein | - |
XJ28_RS30340 () | 38015..38431 | - | 417 | WP_054090699.1 | TraR/DksA family transcriptional regulator | - |
XJ28_RS30345 () | 38454..38684 | - | 231 | WP_004668066.1 | carbon storage regulator | - |
XJ28_RS30350 () | 38835..39908 | - | 1074 | WP_007247680.1 | IS630 family transposase ISPsy1 | Transposase |
XJ28_RS30355 () | 39999..40502 | + | 504 | WP_020339809.1 | hypothetical protein | - |
XJ28_RS30360 () | 40536..41639 | - | 1104 | WP_004663854.1 | IS5 family transposase ISPsy19 | Transposase |
XJ28_RS30365 () | 41847..42824 | - | 978 | WP_010213957.1 | IS5 family transposase IS52 | Transposase |
XJ28_RS30370 () | 43407..44936 | + | 1530 | WP_004666804.1 | acyl--CoA ligase | - |
XJ28_RS30375 () | 45023..45274 | + | 252 | WP_004666805.1 | acyl carrier protein | - |
XJ28_RS30380 () | 45286..45783 | + | 498 | WP_004666806.1 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ | VF |
XJ28_RS30385 () | 45777..46922 | + | 1146 | WP_020313334.1 | beta-ketoacyl-[acyl-carrier-protein] synthase family protein | - |
XJ28_RS30390 () | 46919..47452 | + | 534 | WP_004666808.1 | hypothetical protein | - |
XJ28_RS30395 () | 47449..48867 | + | 1419 | WP_010207030.1 | acyl--CoA ligase | - |
XJ28_RS30400 () | 48899..56923 | + | 8025 | WP_054090779.1 | Narbonolide/10-deoxymethynolide synthase PikA2, modules 3 and 4 | VF |
XJ28_RS30405 () | 56929..63129 | + | 6201 | WP_010207034.1 | Narbonolide/10-deoxymethynolide synthase PikA1, modules 1 and 2 | VF |
XJ28_RS30410 () | 63126..63569 | + | 444 | WP_004666812.1 | PaaI family thioesterase | - |
XJ28_RS30415 () | 63619..64824 | + | 1206 | WP_010207037.1 | crotonyl-CoA carboxylase/reductase | - |
XJ28_RS30420 () | 64880..65623 | + | 744 | WP_010207041.1 | Thioesterase PikA5 | VF |
XJ28_RS30425 () | 65736..66716 | + | 981 | WP_010207043.1 | IS5 family transposase ISPsy2 | Transposase |
XJ28_RS30430 () | 66898..67494 | + | 597 | WP_004666817.1 | response regulator transcription factor | - |
XJ28_RS30435 () | 67491..69071 | + | 1581 | WP_010207047.1 | HAMP domain-containing histidine kinase | - |
XJ28_RS30440 () | 69071..69413 | - | 343 | Protein_64 | response regulator transcription factor | - |
XJ28_RS30445 () | 69615..69845 | + | 231 | WP_010204582.1 | hypothetical protein | VF |
XJ28_RS30450 () | 69856..70704 | + | 849 | WP_005734270.1 | alpha/beta fold hydrolase | - |
XJ28_RS30455 () | 70701..72488 | + | 1788 | WP_010204585.1 | L-allo-isoleucine:holo-[CmaA peptidyl-carrier protein] ligase | - |
XJ28_RS30460 () | 72475..73404 | + | 930 | WP_004666823.1 | chlorinating enzyme | - |
XJ28_RS30465 () | 73414..73836 | + | 423 | WP_004666824.1 | hypothetical protein | - |
XJ28_RS30470 () | 73903..74607 | + | 705 | WP_161937987.1 | Thioesterase PikA5 | VF |
XJ28_RS30475 () | 74613..75241 | + | 629 | Protein_71 | alanyl-tRNA editing protein | - |
XJ28_RS30480 () | 75376..76353 | - | 978 | WP_010213957.1 | IS5 family transposase IS52 | Transposase |
XJ28_RS30485 () | 76503..77606 | + | 1104 | WP_004663854.1 | IS5 family transposase ISPsy19 | Transposase |
XJ28_RS30490 () | 77693..78673 | + | 981 | WP_010207043.1 | IS5 family transposase ISPsy2 | Transposase |
XJ28_RS30495 () | 78849..79460 | + | 612 | WP_005734273.1 | LysE family transporter | - |
XJ28_RS30500 () | 79872..80928 | + | 1057 | Protein_76 | IS630 family transposase ISPsy32 | Transposase |
XJ28_RS30505 () | 80985..81998 | + | 1014 | WP_005741118.1 | IS30 family transposase IS1394 | Transposase |
XJ28_RS30510 () | 82051..82347 | - | 297 | WP_004666829.1 | coronamic acid biosynthesis protein CmaL | - |
XJ28_RS30515 () | 82519..82749 | + | 231 | WP_079216642.1 | DUF4158 domain-containing protein | - |
XJ28_RS30520 () | 82804..83085 | + | 282 | WP_015062535.1 | hypothetical protein | - |
XJ28_RS30525 () | 83066..84295 | + | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
XJ28_RS30535 () | 84471..84653 | + | 183 | WP_054090533.1 | helix-turn-helix domain-containing protein | - |
XJ28_RS30540 () | 84653..84844 | + | 192 | WP_010208571.1 | hypothetical protein | - |
XJ28_RS32705 () | 85027..85200 | + | 174 | WP_005759896.1 | hypothetical protein | - |
XJ28_RS30545 () | 85200..85805 | + | 606 | WP_005759898.1 | hypothetical protein | - |
XJ28_RS30550 () | 85881..86153 | - | 273 | Protein_86 | hypothetical protein | - |
XJ28_RS32370 () | 86186..86350 | - | 165 | WP_004666862.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
XJ28_RS30555 () | 86506..87171 | - | 666 | WP_032641726.1 | hypothetical protein | - |
XJ28_RS30560 () | 87441..87722 | + | 282 | WP_015062535.1 | hypothetical protein | - |
XJ28_RS30565 () | 87703..88932 | + | 1230 | WP_015062536.1 | IS91 family transposase IS801 | Transposase |
XJ28_RS30575 () | 89348..90232 | - | 885 | WP_003465017.1 | HTH-type transcriptional regulator CysL | VF |
XJ28_RS30580 () | 90328..92055 | - | 1728 | WP_003830779.1 | DDE-type integrase/transposase/recombinase | - |
XJ28_RS30590 () | 92284..92499 | - | 216 | WP_105224142.1 | hypothetical protein | - |
XJ28_RS30595 () | 92486..92950 | - | 465 | WP_105224143.1 | hypothetical protein | - |
XJ28_RS30600 () | 92950..95643 | - | 2694 | WP_105224144.1 | Protein TraI | Relaxase |
XJ28_RS30605 () | 95640..95960 | - | 321 | WP_105224145.1 | MobB mobilization protein | - |
XJ28_RS30610 () | 96386..96847 | + | 462 | WP_105224146.1 | hypothetical protein | - |
XJ28_RS30615 () | 96862..97548 | + | 687 | WP_105224147.1 | protein mobD | - |
XJ28_RS30620 () | 97545..98177 | + | 633 | WP_105224148.1 | hypothetical protein | - |
XJ28_RS30625 () | 98230..98493 | - | 264 | WP_105224149.1 | hypothetical protein | - |
XJ28_RS30630 () | 98697..101522 | + | 2826 | WP_105224150.1 | hypothetical protein | VF |
XJ28_RS30635 () | 101519..101956 | + | 438 | WP_105224151.1 | hypothetical protein | - |
XJ28_RS30640 () | 101967..102236 | + | 270 | WP_055311973.1 | hypothetical protein | - |
XJ28_RS30645 () | 102251..102736 | + | 486 | WP_105224152.1 | hypothetical protein | - |
XJ28_RS30650 () | 102729..103532 | + | 804 | WP_105224153.1 | hypothetical protein | - |
XJ28_RS30655 () | 103542..104663 | + | 1122 | WP_105224154.1 | M23 family metallopeptidase | - |
XJ28_RS30660 () | 104682..105473 | + | 792 | WP_105224155.1 | hypothetical protein | - |
XJ28_RS30665 () | 105484..105972 | + | 489 | WP_105224156.1 | hypothetical protein | - |
XJ28_RS30670 () | 105966..106559 | + | 594 | WP_105224157.1 | hypothetical protein | - |
XJ28_RS30675 () | 106675..107625 | - | 951 | WP_105224158.1 | DNA-binding protein | - |
XJ28_RS30680 () | 108009..108197 | - | 189 | WP_105224159.1 | hypothetical protein | - |
XJ28_RS30685 () | 108680..109033 | - | 354 | WP_105224160.1 | hypothetical protein | - |
XJ28_RS30690 () | 109243..110460 | - | 1218 | WP_105224161.1 | replication initiation protein | - |
XJ28_RS30695 () | 110710..111021 | - | 312 | WP_105224162.1 | partition protein C | - |
XJ28_RS30700 () | 111171..111494 | - | 324 | WP_105224163.1 | hypothetical protein | - |
XJ28_RS30705 () | 111491..112117 | - | 627 | WP_105224164.1 | Chromosome-partitioning ATPase Soj | VF |
XJ28_RS30710 () | 112312..112875 | + | 564 | WP_105224165.1 | hypothetical protein | - |
XJ28_RS30715 () | 112877..113080 | + | 204 | WP_105224166.1 | hypothetical protein | - |
XJ28_RS30720 () | 113113..113682 | + | 570 | WP_105224167.1 | HAD family hydrolase | - |
XJ28_RS30725 () | 113679..114215 | + | 537 | WP_105224168.1 | exonuclease domain-containing protein | - |
XJ28_RS30730 () | 114345..114626 | + | 282 | WP_089418471.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
XJ28_RS30735 () | 114598..114927 | + | 330 | WP_105224169.1 | type II toxin-antitoxin system YafQ family toxin | - |
XJ28_RS30740 () | 114930..115343 | + | 414 | WP_105224174.1 | hypothetical protein | - |
XJ28_RS30745 () | 115436..115843 | - | 408 | WP_179952523.1 | hypothetical protein | - |
XJ28_RS30750 () | 115830..116645 | - | 816 | WP_105224171.1 | abortive infection family protein | - |
XJ28_RS30755 () | 116668..121434 | - | 4767 | WP_105224172.1 | DEAD/DEAH box helicase | - |
XJ28_RS30760 () | 121431..122036 | - | 606 | WP_105224173.1 | Tn3 family transposase TnBth3 | Transposase |
XJ28_RS30770 () | 122502..123344 | - | 843 | WP_003830784.1 | AraC family transcriptional regulator | - |
XJ28_RS30775 () | 123462..123995 | + | 534 | WP_032437899.1 | carboxymuconolactone decarboxylase family protein | - |
XJ28_RS30780 () | 124023..124426 | + | 404 | Protein_130 | cytochrome P460 family protein | - |
XJ28_RS30785 () | 124423..124692 | - | 270 | Protein_131 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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