NZ_CP0198721..125801

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 125801 bp
Accession: NZ_CP019872        Location: 1..125801         Organism: Pseudomonas syringae pv. tomato strain B13-200       Replicon: plasmid pB13-200A


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
XJ28_RS30100 () 98..1248 + 1151 WP_087944905.1 IS3 family transposase ISMamg1 Transposase
XJ28_RS30105 () 1380..1820 - 441 WP_011347540.1 carboxymuconolactone decarboxylase family protein -
XJ28_RS30115 () 1948..2712 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
XJ28_RS30120 () 2768..3082 - 315 Protein_4 Tn3 family transposase TnpA_ISPa38 Transposase
XJ28_RS30130 () 3286..4968 + 1683 WP_072255600.1 IS3 family transposase ISNoc1 Transposase
XJ28_RS30135 () 4971..5879 + 909 WP_000393453.1 TniB family NTP-binding protein -
XJ28_RS30140 () 5876..7012 + 1137 WP_105224128.1 TniQ family protein -
XJ28_RS30145 () 7067..7348 + 282 WP_015062535.1 hypothetical protein -
XJ28_RS30150 () 7329..8558 + 1230 WP_015062536.1 IS91 family transposase IS801 Transposase
XJ28_RS30155 () 8740..9753 - 1014 Protein_10 hypothetical protein VF
XJ28_RS30160 () 9810..10517 - 708 WP_004661192.1 DotI/IcmL/TraM family protein -
XJ28_RS30165 () 10514..10867 - 354 WP_032649095.1 conjugal transfer protein -
XJ28_RS30170 () 10893..15713 - 4821 WP_105224129.1 DNA primase -
XJ28_RS30175 () 15756..16043 - 288 WP_004668192.1 IcmT/TraK family protein -
XJ28_RS30180 () 16072..16317 - 246 WP_004666892.1 hypothetical protein -
XJ28_RS30185 () 16354..16905 - 552 WP_050426729.1 Phospholipase D VF
XJ28_RS32700 () 16902..17486 - 585 WP_168199513.1 hypothetical protein -
XJ28_RS30195 () 17684..18865 - 1182 WP_011106982.1 Twitching mobility protein VF
XJ28_RS30200 () 18862..19662 - 801 WP_007247253.1 hypothetical protein VF
XJ28_RS30205 () 19659..20132 - 474 WP_065348691.1 DotD/TraH family lipoprotein -
XJ28_RS30210 () 20169..20660 - 492 WP_105224130.1 hypothetical protein VF
XJ28_RS30220 () 20953..21159 - 207 WP_004668200.1 hypothetical protein -
XJ28_RS30225 () 21248..21760 - 513 WP_105224132.1 transcriptional regulator -
XJ28_RS30230 () 21976..22347 + 372 WP_057425389.1 helix-turn-helix domain-containing protein -
XJ28_RS30235 () 22349..22546 - 198 WP_004642338.1 hypothetical protein -
XJ28_RS30240 () 22597..23568 - 972 WP_105224133.1 putative D,D-dipeptide transport ATP-binding protein DdpF VF
XJ28_RS30245 () 23565..24551 - 987 WP_057425390.1 ABC transporter ATP-binding protein -
XJ28_RS30250 () 24554..25429 - 876 WP_102001477.1 D,D-dipeptide ABC transporter permease -
XJ28_RS30255 () 25431..26447 - 1017 WP_057425386.1 ABC transporter permease -
XJ28_RS30260 () 26540..28120 - 1581 WP_105224134.1 ABC transporter substrate-binding protein -
XJ28_RS30265 () 28239..28778 - 540 WP_004642348.1 D-alanyl-D-alanine dipeptidase -
XJ28_RS30270 () 28816..29676 - 861 WP_004668209.1 MurR/RpiR family transcriptional regulator -
XJ28_RS30275 () 30023..30277 + 255 WP_002556039.1 plasmid stabilization protein Antitoxin Detail
XJ28_RS30280 () 30274..30690 + 417 WP_002556038.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
XJ28_RS30285 () 30952..32907 - 1956 WP_105224135.1 relaxase/mobilization nuclease domain-containing protein -
XJ28_RS30290 () 32918..33247 - 330 WP_060403683.1 ribbon-helix-helix protein, CopG family -
XJ28_RS30295 () 33682..33960 + 279 WP_105224136.1 mobilization protein -
XJ28_RS30300 () 34034..34234 - 201 WP_105224137.1 hypothetical protein -
XJ28_RS30305 () 34303..35139 - 837 WP_105224138.1 DUF945 domain-containing protein -
XJ28_RS30310 () 35185..35562 - 378 WP_105224139.1 hypothetical protein -
XJ28_RS30320 () 36013..36207 - 195 WP_105224140.1 hypothetical protein -
XJ28_RS30330 () 36989..37609 + 621 WP_010204550.1 Tn3 family transposase TnpR_TnEc1 Transposase
XJ28_RS30335 () 37750..37980 - 231 WP_054090700.1 hypothetical protein -
XJ28_RS30340 () 38015..38431 - 417 WP_054090699.1 TraR/DksA family transcriptional regulator -
XJ28_RS30345 () 38454..38684 - 231 WP_004668066.1 carbon storage regulator -
XJ28_RS30350 () 38835..39908 - 1074 WP_007247680.1 IS630 family transposase ISPsy1 Transposase
XJ28_RS30355 () 39999..40502 + 504 WP_020339809.1 hypothetical protein -
XJ28_RS30360 () 40536..41639 - 1104 WP_004663854.1 IS5 family transposase ISPsy19 Transposase
XJ28_RS30365 () 41847..42824 - 978 WP_010213957.1 IS5 family transposase IS52 Transposase
XJ28_RS30370 () 43407..44936 + 1530 WP_004666804.1 acyl--CoA ligase -
XJ28_RS30375 () 45023..45274 + 252 WP_004666805.1 acyl carrier protein -
XJ28_RS30380 () 45286..45783 + 498 WP_004666806.1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ VF
XJ28_RS30385 () 45777..46922 + 1146 WP_020313334.1 beta-ketoacyl-[acyl-carrier-protein] synthase family protein -
XJ28_RS30390 () 46919..47452 + 534 WP_004666808.1 hypothetical protein -
XJ28_RS30395 () 47449..48867 + 1419 WP_010207030.1 acyl--CoA ligase -
XJ28_RS30400 () 48899..56923 + 8025 WP_054090779.1 Narbonolide/10-deoxymethynolide synthase PikA2, modules 3 and 4 VF
XJ28_RS30405 () 56929..63129 + 6201 WP_010207034.1 Narbonolide/10-deoxymethynolide synthase PikA1, modules 1 and 2 VF
XJ28_RS30410 () 63126..63569 + 444 WP_004666812.1 PaaI family thioesterase -
XJ28_RS30415 () 63619..64824 + 1206 WP_010207037.1 crotonyl-CoA carboxylase/reductase -
XJ28_RS30420 () 64880..65623 + 744 WP_010207041.1 Thioesterase PikA5 VF
XJ28_RS30425 () 65736..66716 + 981 WP_010207043.1 IS5 family transposase ISPsy2 Transposase
XJ28_RS30430 () 66898..67494 + 597 WP_004666817.1 response regulator transcription factor -
XJ28_RS30435 () 67491..69071 + 1581 WP_010207047.1 HAMP domain-containing histidine kinase -
XJ28_RS30440 () 69071..69413 - 343 Protein_64 response regulator transcription factor -
XJ28_RS30445 () 69615..69845 + 231 WP_010204582.1 hypothetical protein VF
XJ28_RS30450 () 69856..70704 + 849 WP_005734270.1 alpha/beta fold hydrolase -
XJ28_RS30455 () 70701..72488 + 1788 WP_010204585.1 L-allo-isoleucine:holo-[CmaA peptidyl-carrier protein] ligase -
XJ28_RS30460 () 72475..73404 + 930 WP_004666823.1 chlorinating enzyme -
XJ28_RS30465 () 73414..73836 + 423 WP_004666824.1 hypothetical protein -
XJ28_RS30470 () 73903..74607 + 705 WP_161937987.1 Thioesterase PikA5 VF
XJ28_RS30475 () 74613..75241 + 629 Protein_71 alanyl-tRNA editing protein -
XJ28_RS30480 () 75376..76353 - 978 WP_010213957.1 IS5 family transposase IS52 Transposase
XJ28_RS30485 () 76503..77606 + 1104 WP_004663854.1 IS5 family transposase ISPsy19 Transposase
XJ28_RS30490 () 77693..78673 + 981 WP_010207043.1 IS5 family transposase ISPsy2 Transposase
XJ28_RS30495 () 78849..79460 + 612 WP_005734273.1 LysE family transporter -
XJ28_RS30500 () 79872..80928 + 1057 Protein_76 IS630 family transposase ISPsy32 Transposase
XJ28_RS30505 () 80985..81998 + 1014 WP_005741118.1 IS30 family transposase IS1394 Transposase
XJ28_RS30510 () 82051..82347 - 297 WP_004666829.1 coronamic acid biosynthesis protein CmaL -
XJ28_RS30515 () 82519..82749 + 231 WP_079216642.1 DUF4158 domain-containing protein -
XJ28_RS30520 () 82804..83085 + 282 WP_015062535.1 hypothetical protein -
XJ28_RS30525 () 83066..84295 + 1230 WP_015062536.1 IS91 family transposase IS801 Transposase
XJ28_RS30535 () 84471..84653 + 183 WP_054090533.1 helix-turn-helix domain-containing protein -
XJ28_RS30540 () 84653..84844 + 192 WP_010208571.1 hypothetical protein -
XJ28_RS32705 () 85027..85200 + 174 WP_005759896.1 hypothetical protein -
XJ28_RS30545 () 85200..85805 + 606 WP_005759898.1 hypothetical protein -
XJ28_RS30550 () 85881..86153 - 273 Protein_86 hypothetical protein -
XJ28_RS32370 () 86186..86350 - 165 WP_004666862.1 Tn3 family transposase TnpA_ISPa40 Transposase
XJ28_RS30555 () 86506..87171 - 666 WP_032641726.1 hypothetical protein -
XJ28_RS30560 () 87441..87722 + 282 WP_015062535.1 hypothetical protein -
XJ28_RS30565 () 87703..88932 + 1230 WP_015062536.1 IS91 family transposase IS801 Transposase
XJ28_RS30575 () 89348..90232 - 885 WP_003465017.1 HTH-type transcriptional regulator CysL VF
XJ28_RS30580 () 90328..92055 - 1728 WP_003830779.1 DDE-type integrase/transposase/recombinase -
XJ28_RS30590 () 92284..92499 - 216 WP_105224142.1 hypothetical protein -
XJ28_RS30595 () 92486..92950 - 465 WP_105224143.1 hypothetical protein -
XJ28_RS30600 () 92950..95643 - 2694 WP_105224144.1 Protein TraI Relaxase
XJ28_RS30605 () 95640..95960 - 321 WP_105224145.1 MobB mobilization protein -
XJ28_RS30610 () 96386..96847 + 462 WP_105224146.1 hypothetical protein -
XJ28_RS30615 () 96862..97548 + 687 WP_105224147.1 protein mobD -
XJ28_RS30620 () 97545..98177 + 633 WP_105224148.1 hypothetical protein -
XJ28_RS30625 () 98230..98493 - 264 WP_105224149.1 hypothetical protein -
XJ28_RS30630 () 98697..101522 + 2826 WP_105224150.1 hypothetical protein VF
XJ28_RS30635 () 101519..101956 + 438 WP_105224151.1 hypothetical protein -
XJ28_RS30640 () 101967..102236 + 270 WP_055311973.1 hypothetical protein -
XJ28_RS30645 () 102251..102736 + 486 WP_105224152.1 hypothetical protein -
XJ28_RS30650 () 102729..103532 + 804 WP_105224153.1 hypothetical protein -
XJ28_RS30655 () 103542..104663 + 1122 WP_105224154.1 M23 family metallopeptidase -
XJ28_RS30660 () 104682..105473 + 792 WP_105224155.1 hypothetical protein -
XJ28_RS30665 () 105484..105972 + 489 WP_105224156.1 hypothetical protein -
XJ28_RS30670 () 105966..106559 + 594 WP_105224157.1 hypothetical protein -
XJ28_RS30675 () 106675..107625 - 951 WP_105224158.1 DNA-binding protein -
XJ28_RS30680 () 108009..108197 - 189 WP_105224159.1 hypothetical protein -
XJ28_RS30685 () 108680..109033 - 354 WP_105224160.1 hypothetical protein -
XJ28_RS30690 () 109243..110460 - 1218 WP_105224161.1 replication initiation protein -
XJ28_RS30695 () 110710..111021 - 312 WP_105224162.1 partition protein C -
XJ28_RS30700 () 111171..111494 - 324 WP_105224163.1 hypothetical protein -
XJ28_RS30705 () 111491..112117 - 627 WP_105224164.1 Chromosome-partitioning ATPase Soj VF
XJ28_RS30710 () 112312..112875 + 564 WP_105224165.1 hypothetical protein -
XJ28_RS30715 () 112877..113080 + 204 WP_105224166.1 hypothetical protein -
XJ28_RS30720 () 113113..113682 + 570 WP_105224167.1 HAD family hydrolase -
XJ28_RS30725 () 113679..114215 + 537 WP_105224168.1 exonuclease domain-containing protein -
XJ28_RS30730 () 114345..114626 + 282 WP_089418471.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
XJ28_RS30735 () 114598..114927 + 330 WP_105224169.1 type II toxin-antitoxin system YafQ family toxin -
XJ28_RS30740 () 114930..115343 + 414 WP_105224174.1 hypothetical protein -
XJ28_RS30745 () 115436..115843 - 408 WP_179952523.1 hypothetical protein -
XJ28_RS30750 () 115830..116645 - 816 WP_105224171.1 abortive infection family protein -
XJ28_RS30755 () 116668..121434 - 4767 WP_105224172.1 DEAD/DEAH box helicase -
XJ28_RS30760 () 121431..122036 - 606 WP_105224173.1 Tn3 family transposase TnBth3 Transposase
XJ28_RS30770 () 122502..123344 - 843 WP_003830784.1 AraC family transcriptional regulator -
XJ28_RS30775 () 123462..123995 + 534 WP_032437899.1 carboxymuconolactone decarboxylase family protein -
XJ28_RS30780 () 124023..124426 + 404 Protein_130 cytochrome P460 family protein -
XJ28_RS30785 () 124423..124692 - 270 Protein_131 Tn3 family transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance