MGE detailed information
MGE type: Genomic_island MGE length: 15426 bp
Accession: NZ_CP019871 Location: 565174..580599 Organism: Pseudomonas syringae pv. tomato strain B13-200 Replicon: chromosome
Accession: NZ_CP019871 Location: 565174..580599 Organism: Pseudomonas syringae pv. tomato strain B13-200 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XJ28_RS02860 () | 560438..561664 | + | 1227 | WP_007244476.1 | type II toxin-antitoxin system HipA family toxin | - |
| XJ28_RS02865 () | 561689..562819 | - | 1131 | WP_007244475.1 | Fic family protein | - |
| XJ28_RS02870 () | 563066..564364 | + | 1299 | WP_007244474.1 | M20 family metallopeptidase | - |
| XJ28_RS02880 () | 564535..565128 | - | 594 | WP_007244473.1 | hypothetical protein | - |
| XJ28_RS32395 () | 565174..565674 | - | 501 | WP_010208159.1 | hypothetical protein | - |
| XJ28_RS02890 () | 565949..566416 | + | 468 | WP_005737550.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| XJ28_RS02895 () | 566413..566988 | + | 576 | WP_007244471.1 | PIN domain-containing protein | Toxin Detail |
| XJ28_RS02900 () | 567169..567420 | + | 252 | WP_005614049.1 | helix-turn-helix domain-containing protein | - |
| XJ28_RS02905 () | 567420..568616 | + | 1197 | WP_007244470.1 | type II toxin-antitoxin system HipA family toxin | - |
| XJ28_RS02910 () | 568738..569463 | + | 726 | WP_010208166.1 | N-acetylmuramoyl-L-alanine amidase | - |
| XJ28_RS02915 () | 569521..569898 | + | 378 | WP_007244468.1 | DUF1311 domain-containing protein | - |
| XJ28_RS02920 () | 570944..572674 | + | 1731 | WP_010208168.1 | hypothetical protein | - |
| XJ28_RS02925 () | 572824..575436 | - | 2613 | WP_007244465.1 | hypothetical protein | - |
| XJ28_RS31915 () | 575441..576283 | - | 843 | WP_007244464.1 | hypothetical protein | - |
| XJ28_RS02930 () | 576280..577311 | - | 1032 | WP_010208171.1 | hypothetical protein | - |
| XJ28_RS02935 () | 577308..578336 | - | 1029 | WP_010208172.1 | hypothetical protein | - |
| XJ28_RS02940 () | 578329..579699 | - | 1371 | WP_007244461.1 | metallophosphoesterase | - |
| XJ28_RS02950 () | 580291..581453 | + | 1163 | Protein_548 | IS3 family transposase | - |
| XJ28_RS02965 () | 581750..584227 | - | 2478 | WP_010210791.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|