MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 305127 bp
Accession: NZ_CP019864 Location: 1956727..2261853 Organism: Clostridioides difficile strain DSM 29747 Replicon: chromosome
Accession: NZ_CP019864 Location: 1956727..2261853 Organism: Clostridioides difficile strain DSM 29747 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDIF29747_RS09435 () | 1956113..1956460 | + | 348 | WP_003423929.1 | cupin domain-containing protein | - |
| CDIF29747_RS09440 () | 1956609..1957658 | - | 1050 | WP_003423932.1 | ABC transporter substrate-binding protein | - |
| CDIF29747_RS09445 () | 1958037..1958774 | + | 738 | WP_003423934.1 | class I SAM-dependent methyltransferase | - |
| CDIF29747_RS09450 () | 1958899..1959390 | - | 492 | WP_003423936.1 | prolyl-tRNA synthetase associated domain-containing protein | - |
| CDIF29747_RS09455 () | 1959739..1960122 | + | 384 | WP_003423938.1 | hypothetical protein | - |
| CDIF29747_RS09460 () | 1960628..1961011 | + | 384 | WP_003423940.1 | YtxH domain-containing protein | - |
| CDIF29747_RS09465 () | 1961013..1961363 | + | 351 | WP_003423942.1 | hypothetical protein | - |
| CDIF29747_RS09470 () | 1961463..1961921 | - | 459 | WP_003423944.1 | hypothetical protein | - |
| CDIF29747_RS09475 () | 1961969..1962757 | - | 789 | WP_003423946.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CDIF29747_RS09480 () | 1962896..1963333 | - | 438 | WP_009905609.1 | cytidine/deoxycytidylate deaminase family protein | - |
| CDIF29747_RS09490 () | 1964213..1964299 | + | 87 | Protein_1733 | transposase | - |
| CDIF29747_RS19125 () | 1964320..1964469 | + | 150 | WP_003423951.1 | hypothetical protein | - |
| CDIF29747_RS09500 () | 1964746..1965255 | + | 510 | WP_003423953.1 | hypothetical protein | VF |
| CDIF29747_RS09510 () | 1965646..1966182 | + | 537 | WP_003423954.1 | signal peptidase II | - |
| CDIF29747_RS09520 () | 1966940..1967560 | + | 621 | WP_003423956.1 | Crp/Fnr family transcriptional regulator | - |
| CDIF29747_RS09525 () | 1967716..1968498 | + | 783 | WP_003423957.1 | aminoglycoside 6-adenylyltransferase | - |
| CDIF29747_RS09530 () | 1968623..1969549 | + | 927 | WP_003423958.1 | hypothetical protein | - |
| CDIF29747_RS09535 () | 1969563..1970069 | + | 507 | WP_003423959.1 | GNAT family N-acetyltransferase | - |
| CDIF29747_RS09540 () | 1970138..1970799 | + | 662 | Protein_1741 | Transposase from transposon Tn916 ; Integrase | Integrase |
| CDIF29747_RS09545 () | 1971090..1971875 | + | 786 | WP_002587860.1 | Sporulation initiation inhibitor protein Soj | VF |
| CDIF29747_RS09550 () | 1971865..1972794 | + | 930 | WP_002587861.1 | ParB/RepB/Spo0J family partition protein | - |
| CDIF29747_RS09555 () | 1972772..1973083 | + | 312 | WP_002587862.1 | hypothetical protein | - |
| CDIF29747_RS09560 () | 1973299..1973697 | + | 399 | WP_002587863.1 | hypothetical protein | - |
| CDIF29747_RS09565 () | 1973712..1974110 | + | 399 | WP_002587864.1 | single-stranded DNA-binding protein | - |
| CDIF29747_RS09570 () | 1974123..1974515 | + | 393 | WP_002587865.1 | hypothetical protein | - |
| CDIF29747_RS09575 () | 1974508..1975431 | + | 924 | WP_002587866.1 | replication initiator protein A | - |
| CDIF29747_RS09580 () | 1975445..1976257 | + | 813 | WP_002587867.1 | replication initiator protein A | - |
| CDIF29747_RS09585 () | 1976254..1977051 | + | 798 | WP_002587868.1 | IS21 family transposase ISGau7 | Transposase |
| CDIF29747_RS09590 () | 1977134..1977625 | + | 492 | WP_002587869.1 | PcfB family protein | - |
| CDIF29747_RS09595 () | 1977646..1979547 | + | 1902 | WP_103656253.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CDIF29747_RS09600 () | 1979622..1979837 | + | 216 | WP_002587871.1 | Maff2 family protein | - |
| CDIF29747_RS09605 () | 1979849..1980718 | + | 870 | WP_032511037.1 | hypothetical protein | - |
| CDIF29747_RS09610 () | 1980747..1981208 | + | 462 | WP_022615249.1 | PrgI family protein | - |
| CDIF29747_RS09615 () | 1981093..1983546 | + | 2454 | WP_172970820.1 | ATP-binding protein | - |
| CDIF29747_RS09620 () | 1983660..1986440 | + | 2781 | WP_002585008.1 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS | VF |
| CDIF29747_RS09625 () | 1986478..1986798 | + | 321 | WP_002585007.1 | DUF4315 family protein | - |
| CDIF29747_RS09630 () | 1986737..1988116 | + | 1380 | WP_022615255.1 | DUF4366 domain-containing protein | - |
| CDIF29747_RS09635 () | 1988135..1988695 | + | 561 | WP_032511075.1 | adenine methyltransferase | - |
| CDIF29747_RS09640 () | 1988697..1990769 | + | 2073 | WP_002585004.1 | DNA topoisomerase 3 | - |
| CDIF29747_RS09645 () | 1990835..1997203 | + | 6369 | WP_002585003.1 | LPXTG cell wall anchor domain-containing protein | - |
| CDIF29747_RS19130 () | 1997282..1997422 | + | 141 | WP_002585002.1 | hypothetical protein | - |
| CDIF29747_RS09650 () | 1997429..1998517 | + | 1089 | WP_002585001.1 | hypothetical protein | - |
| CDIF29747_RS09655 () | 1998578..1998895 | + | 318 | WP_004452875.1 | hypothetical protein | - |
| CDIF29747_RS19135 () | 1998892..1999038 | + | 147 | WP_002584999.1 | hypothetical protein | - |
| CDIF29747_RS09660 () | 1999016..1999657 | + | 642 | WP_002584998.1 | JAB domain-containing protein | - |
| CDIF29747_RS09665 () | 1999675..2007354 | + | 7680 | WP_103656247.1 | DEAD/DEAH box helicase family protein | - |
| CDIF29747_RS09670 () | 2007955..2009415 | + | 1461 | WP_103656246.1 | Lsa family ABC-F type ribosomal protection protein | - |
| CDIF29747_RS09675 () | 2009597..2010361 | + | 765 | WP_002584993.1 | hypothetical protein | VF |
| CDIF29747_RS09680 () | 2010375..2013476 | + | 3102 | WP_002584992.1 | DUF4316 domain-containing protein | - |
| CDIF29747_RS09685 () | 2013617..2014444 | + | 828 | WP_002584991.1 | WYL domain-containing protein | - |
| CDIF29747_RS09690 () | 2014617..2014979 | + | 363 | WP_002584990.1 | hypothetical protein | - |
| CDIF29747_RS09695 () | 2015190..2016110 | + | 921 | WP_002584989.1 | helix-turn-helix domain-containing protein | - |
| CDIF29747_RS09700 () | 2016125..2016349 | + | 225 | WP_002584988.1 | DUF5348 domain-containing protein | - |
| CDIF29747_RS09710 () | 2016869..2017735 | - | 867 | WP_001255868.1 | Aminoglycoside 6-adenylyltransferase | ARG |
| CDIF29747_RS09715 () | 2017941..2018570 | - | 630 | WP_002584987.1 | alpha/beta hydrolase | - |
| CDIF29747_RS09720 () | 2018596..2019396 | - | 801 | WP_002584986.1 | helix-turn-helix domain-containing protein | - |
| CDIF29747_RS09725 () | 2019711..2020124 | + | 414 | WP_002584985.1 | cysteine-rich VLP domain-containing protein | - |
| CDIF29747_RS09730 () | 2020236..2020631 | + | 396 | WP_002584984.1 | replication initiator protein A | - |
| CDIF29747_RS09735 () | 2020816..2021760 | + | 945 | WP_002584983.1 | plasmid recombination protein | - |
| CDIF29747_RS09740 () | 2021833..2022027 | + | 195 | WP_002334813.1 | hypothetical protein | - |
| CDIF29747_RS09745 () | 2022173..2023750 | + | 1578 | WP_071599205.1 | IS607 family transposase ISCARN56 | Transposase |
| CDIF29747_RS09750 () | 2023836..2024285 | + | 450 | WP_004452836.1 | hypothetical protein | - |
| CDIF29747_RS09755 () | 2024401..2025996 | + | 1596 | WP_002584981.1 | MobA/MobL family protein | - |
| CDIF29747_RS09760 () | 2026065..2026682 | + | 618 | WP_022615270.1 | DNA primase | - |
| CDIF29747_RS09765 () | 2026615..2027964 | + | 1350 | WP_002584979.1 | virulence-associated E family protein | - |
| CDIF29747_RS19195 () | 2028039..2028221 | + | 183 | Protein_1788 | hypothetical protein | - |
| CDIF29747_RS09775 () | 2028218..2028385 | + | 168 | WP_002584978.1 | transposon-encoded TnpW family protein | - |
| CDIF29747_RS09780 () | 2028424..2029254 | + | 831 | Protein_1790 | TraM recognition domain-containing protein | - |
| CDIF29747_RS09785 () | 2029496..2029627 | + | 132 | WP_083504113.1 | hypothetical protein | - |
| CDIF29747_RS09790 () | 2030347..2032233 | + | 1887 | WP_103656245.1 | group II intron reverse transcriptase/maturase | - |
| CDIF29747_RS09795 () | 2032549..2033769 | - | 1221 | WP_002578914.1 | hypothetical protein | ARG |
| CDIF29747_RS09800 () | 2034190..2034588 | + | 399 | WP_002584975.1 | plasmid mobilization relaxosome protein MobC | - |
| CDIF29747_RS09805 () | 2034560..2036185 | + | 1626 | WP_002584974.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CDIF29747_RS09810 () | 2036175..2036561 | + | 387 | WP_004452819.1 | cysteine-rich VLP domain-containing protein | - |
| CDIF29747_RS09820 () | 2036674..2037090 | + | 417 | Protein_1797 | phage replisome organizer N-terminal domain-containing protein | - |
| CDIF29747_RS09825 () | 2037090..2038478 | + | 1389 | Protein_1798 | hypothetical protein ; Integrase | Integrase |
| CDIF29747_RS09830 () | 2038557..2038772 | + | 216 | WP_002584971.1 | transposon-encoded TnpW family protein | - |
| CDIF29747_RS09835 () | 2038907..2039209 | + | 303 | WP_002584970.1 | hypothetical protein | - |
| CDIF29747_RS09840 () | 2039378..2040211 | + | 834 | WP_002584969.1 | methyltransferase domain-containing protein | - |
| CDIF29747_RS09845 () | 2040333..2040638 | + | 306 | WP_002584968.1 | DUF3847 domain-containing protein | - |
| CDIF29747_RS09850 () | 2040878..2042392 | + | 1515 | WP_131743550.1 | MobA/MobL family protein | - |
| CDIF29747_RS09855 () | 2042407..2044308 | + | 1902 | WP_002584966.1 | AAA family ATPase | - |
| CDIF29747_RS09865 () | 2044698..2044964 | + | 267 | WP_002584965.1 | DUF4315 family protein | - |
| CDIF29747_RS09870 () | 2044954..2045703 | + | 750 | WP_002584964.1 | DUF4366 domain-containing protein | - |
| CDIF29747_RS09875 () | 2045700..2047775 | + | 2076 | WP_002584963.1 | type IA DNA topoisomerase | - |
| CDIF29747_RS09880 () | 2047772..2048140 | + | 369 | WP_002584962.1 | cysteine-rich VLP domain-containing protein | - |
| CDIF29747_RS09885 () | 2048266..2051613 | + | 3348 | WP_002584961.1 | antirestriction protein ArdA | - |
| CDIF29747_RS09890 () | 2051618..2051827 | + | 210 | WP_002584960.1 | transposon-transfer assisting family protein | - |
| CDIF29747_RS09895 () | 2052029..2053363 | - | 1335 | WP_002584959.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CDIF29747_RS09900 () | 2053324..2053653 | - | 330 | WP_002584958.1 | plasmid mobilization relaxosome protein MobC | - |
| CDIF29747_RS09905 () | 2053855..2054211 | - | 357 | WP_002584957.1 | helix-turn-helix transcriptional regulator | - |
| CDIF29747_RS09910 () | 2054568..2054753 | + | 186 | WP_003431289.1 | hypothetical protein | - |
| CDIF29747_RS09915 () | 2054770..2055753 | + | 984 | WP_002584956.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| CDIF29747_RS09920 () | 2056229..2056987 | + | 759 | Protein_1816 | hypothetical protein ; Integrase | Integrase |
| CDIF29747_RS09925 () | 2057042..2058409 | - | 1368 | WP_002584954.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CDIF29747_RS09930 () | 2058376..2058699 | - | 324 | WP_002584953.1 | plasmid mobilization relaxosome protein MobC | - |
| CDIF29747_RS09935 () | 2058957..2059316 | + | 360 | WP_004452794.1 | MmcQ/YjbR family DNA-binding protein | - |
| CDIF29747_RS09940 () | 2059362..2059832 | + | 471 | WP_004452793.1 | hypothetical protein | - |
| CDIF29747_RS09945 () | 2059924..2060733 | + | 810 | WP_004452792.1 | hypothetical protein | - |
| CDIF29747_RS09950 () | 2060953..2062167 | + | 1215 | WP_103656244.1 | IS256 family transposase ISCcl1 | Transposase |
| CDIF29747_RS09955 () | 2062516..2062746 | - | 231 | WP_004452791.1 | helix-turn-helix domain-containing protein | - |
| CDIF29747_RS09960 () | 2062814..2063554 | - | 741 | WP_004452790.1 | XRE family transcriptional regulator | - |
| CDIF29747_RS09965 () | 2063747..2064994 | + | 1248 | WP_032511019.1 | DNA polymerase IV | - |
| CDIF29747_RS09970 () | 2064994..2065221 | + | 228 | WP_004452786.1 | HTH domain-containing protein | - |
| CDIF29747_RS09975 () | 2065234..2065473 | + | 240 | WP_004452785.1 | hypothetical protein | - |
| CDIF29747_RS09980 () | 2065704..2066276 | + | 573 | WP_032511050.1 | hypothetical protein | - |
| CDIF29747_RS09985 () | 2066286..2066651 | + | 366 | WP_032511047.1 | hypothetical protein | - |
| CDIF29747_RS09990 () | 2066813..2067127 | + | 315 | WP_002584939.1 | helix-turn-helix domain-containing protein | - |
| CDIF29747_RS09995 () | 2067269..2067487 | + | 219 | WP_004452780.1 | hypothetical protein | - |
| CDIF29747_RS10000 () | 2067607..2067915 | + | 309 | WP_170875421.1 | hypothetical protein | - |
| CDIF29747_RS10005 () | 2068279..2068752 | + | 474 | WP_004452778.1 | sigma-70 family RNA polymerase sigma factor | - |
| CDIF29747_RS10010 () | 2069301..2069684 | + | 384 | WP_004452777.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CDIF29747_RS10015 () | 2069665..2069913 | + | 249 | WP_004452776.1 | hypothetical protein | - |
| CDIF29747_RS10020 () | 2070022..2071713 | + | 1692 | WP_004452774.1 | hypothetical protein ; Integrase | Integrase |
| CDIF29747_RS10025 () | 2071715..2073406 | + | 1692 | WP_022615281.1 | IS607 family transposase ISTsi1 | Transposase |
| CDIF29747_RS10030 () | 2073403..2074980 | + | 1578 | WP_004452771.1 | hypothetical protein ; Integrase | Integrase |
| CDIF29747_RS10035 () | 2075037..2075270 | + | 234 | WP_069972670.1 | tyrosine-type recombinase/integrase | - |
| CDIF29747_RS10045 () | 2075528..2076328 | - | 801 | WP_003423966.1 | ABC transporter permease | - |
| CDIF29747_RS10055 () | 2076523..2078121 | - | 1599 | WP_003423968.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| CDIF29747_RS10060 () | 2078449..2078625 | + | 177 | WP_003423970.1 | hypothetical protein | - |
| CDIF29747_RS10065 () | 2078799..2079929 | + | 1131 | WP_003423972.1 | Aldehyde-alcohol dehydrogenase | VF |
| CDIF29747_RS10070 () | 2080170..2080520 | + | 351 | WP_003423973.1 | BMC domain-containing protein | - |
| CDIF29747_RS10075 () | 2080528..2080977 | + | 450 | WP_003423975.1 | EutP/PduV family microcompartment system protein | - |
| CDIF29747_RS10080 () | 2081080..2081655 | + | 576 | WP_003423977.1 | putative transcriptional regulatory protein pdtaR | VF |
| CDIF29747_RS10085 () | 2081648..2083057 | + | 1410 | WP_003423979.1 | histidine kinase N-terminal domain-containing protein | - |
| CDIF29747_RS10090 () | 2083241..2084674 | + | 1434 | WP_003423981.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| CDIF29747_RS10095 () | 2084692..2086056 | + | 1365 | WP_003423983.1 | ethanolamine ammonia-lyase subunit EutB | - |
| CDIF29747_RS10100 () | 2086069..2086950 | + | 882 | WP_003423985.1 | ethanolamine ammonia-lyase subunit EutC | - |
| CDIF29747_RS10105 () | 2086970..2087623 | + | 654 | WP_003423987.1 | ethanolamine utilization microcompartment protein EutL | - |
| CDIF29747_RS10110 () | 2087634..2088338 | + | 705 | WP_003423989.1 | BMC domain-containing protein | - |
| CDIF29747_RS10115 () | 2088341..2089810 | + | 1470 | WP_003423990.1 | Aldehyde-alcohol dehydrogenase | VF |
| CDIF29747_RS10120 () | 2089896..2090183 | + | 288 | WP_003423991.1 | ethanolamine utilization microcompartment protein EutM | - |
| CDIF29747_RS10125 () | 2090310..2091071 | + | 762 | WP_003423992.1 | cob(I)yrinic acid a,c-diamide adenosyltransferase | - |
| CDIF29747_RS10130 () | 2091084..2091713 | + | 630 | WP_003423993.1 | phosphate propanoyltransferase | - |
| CDIF29747_RS10135 () | 2091755..2092480 | + | 726 | WP_003423994.1 | TIGR02536 family ethanolamine utilization protein | - |
| CDIF29747_RS10140 () | 2092493..2092765 | + | 273 | WP_003423995.1 | EutN/CcmL family microcompartment protein | - |
| CDIF29747_RS10145 () | 2092758..2093309 | + | 552 | WP_003423996.1 | BMC domain-containing protein | - |
| CDIF29747_RS10150 () | 2093321..2094412 | + | 1092 | WP_032510209.1 | ethanolamine utilization protein EutH | - |
| CDIF29747_RS10155 () | 2094414..2094887 | + | 474 | WP_009893336.1 | DUF861 domain-containing protein | - |
| CDIF29747_RS10160 () | 2095007..2096056 | - | 1050 | WP_004452764.1 | HTH-type transcriptional activator RhaS | VF |
| CDIF29747_RS10165 () | 2096229..2097596 | + | 1368 | WP_003424003.1 | MFS transporter | - |
| CDIF29747_RS10170 () | 2097627..2099228 | + | 1602 | WP_003424006.1 | family 78 glycoside hydrolase catalytic domain | - |
| CDIF29747_RS10175 () | 2099375..2099974 | - | 600 | WP_003424009.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| CDIF29747_RS10180 () | 2100144..2101502 | + | 1359 | WP_003424011.1 | hypothetical protein | - |
| CDIF29747_RS10185 () | 2101495..2102127 | + | 633 | WP_003424014.1 | Outer membrane lipoprotein Omp16 | VF |
| CDIF29747_RS10190 () | 2102456..2103613 | + | 1158 | WP_003424024.1 | MBL fold metallo-hydrolase | - |
| CDIF29747_RS10195 () | 2103732..2104367 | - | 636 | WP_009905624.1 | transcriptional repressor LexA | - |
| CDIF29747_RS10200 () | 2104471..2105598 | - | 1128 | WP_003424031.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CDIF29747_RS10205 () | 2105921..2106766 | - | 846 | WP_003424033.1 | hypothetical protein | - |
| CDIF29747_RS10210 () | 2106795..2107166 | - | 372 | WP_003424036.1 | ACT domain-containing protein | - |
| CDIF29747_RS10215 () | 2107319..2107579 | - | 261 | WP_003424039.1 | stage V sporulation protein S | - |
| CDIF29747_RS10220 () | 2107768..2108712 | - | 945 | WP_003424062.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| CDIF29747_RS10225 () | 2108733..2109587 | - | 855 | WP_003424064.1 | acetyl-CoA carboxylase, carboxyltransferase subunit beta | - |
| CDIF29747_RS10230 () | 2109602..2110963 | - | 1362 | WP_003424066.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| CDIF29747_RS10235 () | 2110979..2111431 | - | 453 | WP_003424068.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| CDIF29747_RS10240 () | 2111701..2112147 | - | 447 | WP_003424070.1 | hypothetical protein | - |
| CDIF29747_RS10245 () | 2112422..2112700 | + | 279 | WP_003424072.1 | hypothetical protein | - |
| CDIF29747_RS10250 () | 2112829..2113575 | - | 747 | WP_003424079.1 | hypothetical protein | - |
| CDIF29747_RS10255 () | 2113704..2114348 | - | 645 | WP_009889910.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| CDIF29747_RS10260 () | 2114486..2114806 | - | 321 | WP_003424083.1 | hypothetical protein | - |
| CDIF29747_RS10265 () | 2115125..2115811 | - | 687 | WP_009905631.1 | putative ABC transporter ATP-binding protein YknY | VF |
| CDIF29747_RS10270 () | 2115826..2118303 | - | 2478 | WP_003424092.1 | FtsX-like permease family protein | - |
| CDIF29747_RS10275 () | 2118523..2119920 | - | 1398 | WP_003424094.1 | HAMP domain-containing histidine kinase | - |
| CDIF29747_RS10280 () | 2120419..2121279 | + | 861 | WP_003424097.1 | YitT family protein | - |
| CDIF29747_RS10285 () | 2121520..2122077 | - | 558 | WP_009905633.1 | GNAT family N-acetyltransferase | - |
| CDIF29747_RS10290 () | 2122267..2123154 | - | 888 | WP_003424101.1 | LysR family transcriptional regulator | - |
| CDIF29747_RS10295 () | 2123273..2124472 | + | 1200 | WP_003424103.1 | coenzyme F420-0:L-glutamate ligase | - |
| CDIF29747_RS10300 () | 2124677..2127232 | - | 2556 | WP_003424110.1 | FtsX-like permease family protein | - |
| CDIF29747_RS10305 () | 2127229..2127915 | - | 687 | WP_003424112.1 | ABC transporter ATP-binding protein YxdL | VF |
| CDIF29747_RS10310 () | 2127990..2128898 | - | 909 | WP_003424113.1 | HAMP domain-containing histidine kinase | - |
| CDIF29747_RS10315 () | 2128900..2129571 | - | 672 | WP_003424114.1 | Sensory transduction protein regX3 | VF |
| CDIF29747_RS10320 () | 2129833..2130897 | + | 1065 | WP_003424115.1 | 4Fe-4S ferredoxin | - |
| CDIF29747_RS10325 () | 2131055..2131741 | + | 687 | WP_003424116.1 | Transcriptional regulatory protein WalR | VF |
| CDIF29747_RS10330 () | 2131731..2132762 | + | 1032 | WP_009905636.1 | HAMP domain-containing histidine kinase | - |
| CDIF29747_RS10335 () | 2132844..2133509 | + | 666 | WP_003424118.1 | Bacitracin export ATP-binding protein BceA | VF |
| CDIF29747_RS10340 () | 2133522..2135939 | + | 2418 | WP_003424119.1 | ABC transporter permease | - |
| CDIF29747_RS10345 () | 2136120..2136911 | - | 792 | WP_003424121.1 | class I SAM-dependent methyltransferase | - |
| CDIF29747_RS10350 () | 2136944..2137531 | - | 588 | WP_003424122.1 | TetR/AcrR family transcriptional regulator | - |
| CDIF29747_RS10355 () | 2137709..2139100 | - | 1392 | WP_003424124.1 | hypothetical protein | - |
| CDIF29747_RS10360 () | 2139267..2139476 | - | 210 | Protein_1902 | acyl-CoA thioesterase | - |
| CDIF29747_RS10365 () | 2139658..2140638 | + | 981 | WP_003424128.1 | CPBP family intramembrane metalloprotease | - |
| CDIF29747_RS10370 () | 2140854..2141729 | - | 876 | WP_003424130.1 | hypothetical protein | - |
| CDIF29747_RS10375 () | 2141911..2142597 | - | 687 | WP_003424132.1 | DUF554 domain-containing protein | - |
| CDIF29747_RS10380 () | 2142646..2143185 | - | 540 | WP_003424133.1 | prolyl-tRNA synthetase associated domain-containing protein | - |
| CDIF29747_RS10385 () | 2143231..2143863 | - | 633 | WP_003424134.1 | cyclase family protein | - |
| CDIF29747_RS10390 () | 2143950..2145032 | - | 1083 | WP_003424135.1 | SIR2 family protein | - |
| CDIF29747_RS10395 () | 2145165..2146511 | - | 1347 | WP_003424136.1 | M20 family metallopeptidase | - |
| CDIF29747_RS10400 () | 2146580..2147860 | - | 1281 | WP_003424137.1 | methionine gamma-lyase family protein | - |
| CDIF29747_RS10405 () | 2147987..2148244 | - | 258 | WP_003424138.1 | RNA chaperone Hfq | - |
| CDIF29747_RS10410 () | 2148358..2149293 | - | 936 | WP_009905646.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| CDIF29747_RS10415 () | 2149314..2151278 | - | 1965 | WP_003424140.1 | DNA mismatch repair endonuclease MutL | - |
| CDIF29747_RS10420 () | 2151289..2154132 | - | 2844 | WP_003424141.1 | DNA mismatch repair protein MutS | - |
| CDIF29747_RS10425 () | 2154295..2155029 | - | 735 | WP_003424142.1 | ABC transporter ATP-binding protein | - |
| CDIF29747_RS10430 () | 2154998..2156011 | - | 1014 | WP_003424143.1 | ABC transporter substrate-binding protein | - |
| CDIF29747_RS10435 () | 2156033..2156803 | - | 771 | WP_003424144.1 | ABC transporter permease | - |
| CDIF29747_RS10440 () | 2156778..2157068 | - | 291 | WP_003424145.1 | MTH1187 family thiamine-binding protein | - |
| CDIF29747_RS10445 () | 2157424..2157558 | - | 135 | WP_003424146.1 | hypothetical protein | - |
| CDIF29747_RS19140 () | 2157573..2157746 | - | 174 | WP_003424147.1 | hypothetical protein | - |
| CDIF29747_RS10450 () | 2158410..2158586 | + | 177 | WP_003428796.1 | hypothetical protein | - |
| CDIF29747_RS10455 () | 2158701..2159057 | - | 357 | WP_003424148.1 | helix-turn-helix transcriptional regulator | - |
| CDIF29747_RS10460 () | 2159313..2160233 | + | 921 | WP_003424149.1 | PhzF family isomerase | - |
| CDIF29747_RS10465 () | 2160458..2161069 | + | 612 | WP_003424150.1 | CoA pyrophosphatase | - |
| CDIF29747_RS10470 () | 2161374..2161712 | + | 339 | WP_009905652.1 | DUF3784 domain-containing protein | - |
| CDIF29747_RS10480 () | 2162120..2163556 | - | 1437 | WP_003424153.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| CDIF29747_RS10485 () | 2163807..2165243 | - | 1437 | WP_009905653.1 | N-acetylmuramoyl-L-alanine amidase LytC | VF |
| CDIF29747_RS10495 () | 2166072..2166623 | - | 552 | WP_003424155.1 | tryptophan transporter | - |
| CDIF29747_RS10500 () | 2167467..2167874 | - | 408 | WP_029158138.1 | hypothetical protein | - |
| CDIF29747_RS10505 () | 2168212..2168697 | - | 486 | WP_009905654.1 | SH3 domain-containing protein | - |
| CDIF29747_RS10510 () | 2169223..2169561 | - | 339 | WP_003424159.1 | hypothetical protein | - |
| CDIF29747_RS10515 () | 2169548..2169775 | - | 228 | WP_003424160.1 | helix-turn-helix domain-containing protein | - |
| CDIF29747_RS10520 () | 2170112..2170348 | + | 237 | WP_003424162.1 | hypothetical protein | - |
| CDIF29747_RS10525 () | 2170625..2170909 | - | 285 | WP_003424163.1 | hypothetical protein | - |
| CDIF29747_RS10530 () | 2171232..2171489 | - | 258 | WP_003424164.1 | hypothetical protein | - |
| CDIF29747_RS10535 () | 2171628..2171999 | - | 372 | WP_003424165.1 | hypothetical protein | - |
| CDIF29747_RS10540 () | 2172442..2173014 | - | 573 | WP_003424166.1 | hypothetical protein | - |
| CDIF29747_RS10555 () | 2174000..2174194 | - | 195 | WP_003424168.1 | hypothetical protein | - |
| CDIF29747_RS10565 () | 2174731..2175111 | - | 381 | WP_003424180.1 | hypothetical protein | - |
| CDIF29747_RS10570 () | 2175104..2175361 | - | 258 | WP_003424182.1 | hypothetical protein | - |
| CDIF29747_RS10575 () | 2175348..2175581 | - | 234 | WP_003424184.1 | hypothetical protein | - |
| CDIF29747_RS10580 () | 2175769..2175957 | + | 189 | WP_003424185.1 | helix-turn-helix transcriptional regulator | - |
| - () | 2179837..2179937 | + | 101 | NuclAT_0 | - | Antitoxin Detail |
| CDIF29747_RS10585 () | 2179881..2180033 | - | 153 | WP_003424190.1 | hypothetical protein | Toxin Detail |
| CDIF29747_RS10590 () | 2180553..2180795 | + | 243 | WP_003424191.1 | hypothetical protein | - |
| CDIF29747_RS10595 () | 2180861..2181406 | + | 546 | WP_077699404.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| CDIF29747_RS10600 () | 2181951..2182796 | + | 846 | WP_003424194.1 | DUF4878 domain-containing protein | - |
| CDIF29747_RS10605 () | 2183020..2183184 | - | 165 | WP_003424195.1 | hypothetical protein | - |
| CDIF29747_RS10610 () | 2183716..2184047 | - | 332 | Protein_1948 | carboxymuconolactone decarboxylase family protein | - |
| CDIF29747_RS10615 () | 2184307..2184948 | - | 642 | WP_003424198.1 | SdpI family protein | - |
| CDIF29747_RS10620 () | 2184929..2185222 | - | 294 | WP_009889969.1 | autorepressor SdpR family transcription factor | - |
| CDIF29747_RS10625 () | 2185616..2185675 | + | 60 | WP_071585685.1 | hypothetical protein | - |
| CDIF29747_RS10635 () | 2186191..2186943 | - | 753 | WP_003424201.1 | TSUP family transporter | - |
| CDIF29747_RS10640 () | 2187004..2188659 | - | 1656 | WP_003424202.1 | PocR ligand-binding domain-containing protein | - |
| CDIF29747_RS10645 () | 2188671..2189033 | - | 363 | WP_009905671.1 | Transcriptional regulator MntR | VF |
| CDIF29747_RS10650 () | 2189348..2189716 | - | 369 | WP_003424204.1 | IS607 family transposase ISCbo6 | Transposase |
| CDIF29747_RS10655 () | 2189865..2190659 | + | 795 | WP_009905672.1 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | - |
| CDIF29747_RS10660 () | 2190812..2191240 | - | 429 | WP_003424207.1 | flavodoxin | - |
| CDIF29747_RS10665 () | 2191754..2192692 | - | 939 | WP_003424208.1 | Major intracellular serine protease | VF |
| CDIF29747_RS10670 () | 2193206..2194018 | - | 813 | WP_003424210.1 | alpha/beta hydrolase | - |
| CDIF29747_RS10675 () | 2194047..2194673 | - | 627 | WP_009905677.1 | TetR/AcrR family transcriptional regulator | - |
| CDIF29747_RS10680 () | 2195014..2196669 | - | 1656 | WP_003424214.1 | dihydroxy-acid dehydratase | - |
| CDIF29747_RS10685 () | 2196991..2197290 | - | 300 | WP_003424216.1 | hypothetical protein | - |
| CDIF29747_RS10690 () | 2197547..2198227 | + | 681 | WP_003424218.1 | VanZ family protein | - |
| CDIF29747_RS10695 () | 2198337..2198594 | - | 258 | WP_003424219.1 | hypothetical protein | - |
| CDIF29747_RS10700 () | 2199138..2199509 | + | 372 | WP_003424221.1 | helix-turn-helix domain-containing protein | - |
| CDIF29747_RS10705 () | 2199506..2199646 | - | 141 | WP_009889993.1 | hypothetical protein | - |
| CDIF29747_RS10710 () | 2200312..2201208 | - | 897 | WP_003424224.1 | AraC family transcriptional regulator | - |
| CDIF29747_RS10715 () | 2201350..2202777 | + | 1428 | WP_003424226.1 | MFS transporter | - |
| CDIF29747_RS10720 () | 2202954..2205548 | - | 2595 | WP_003424228.1 | Chaperone protein ClpB | VF |
| CDIF29747_RS10725 () | 2205585..2206181 | - | 597 | WP_003424230.1 | hypothetical protein | - |
| CDIF29747_RS10730 () | 2206198..2206602 | - | 405 | WP_003424231.1 | replication/maintenance protein RepL | - |
| CDIF29747_RS10735 () | 2206969..2207343 | + | 375 | WP_003424232.1 | GntR family transcriptional regulator | - |
| CDIF29747_RS10740 () | 2207340..2208203 | + | 864 | WP_003424233.1 | ABC transporter ATP-binding protein NatA | VF |
| CDIF29747_RS10745 () | 2208203..2208841 | + | 639 | WP_003424234.1 | ABC-2 transporter permease | - |
| CDIF29747_RS10750 () | 2209331..2209744 | + | 414 | WP_009905693.1 | GNAT family N-acetyltransferase | - |
| CDIF29747_RS10755 () | 2209936..2211153 | + | 1218 | WP_003424236.1 | N-carbamoyl-L-amino-acid hydrolase | VF |
| CDIF29747_RS10760 () | 2211315..2212013 | + | 699 | WP_003424237.1 | amino acid racemase | - |
| CDIF29747_RS10765 () | 2212207..2212824 | - | 618 | WP_003424239.1 | DUF4878 domain-containing protein | - |
| CDIF29747_RS10770 () | 2212951..2213973 | - | 1023 | WP_003424241.1 | Ornithine carbamoyltransferase | VF |
| CDIF29747_RS10775 () | 2214083..2215270 | - | 1188 | WP_003424243.1 | Acetylornithine aminotransferase | VF |
| CDIF29747_RS10780 () | 2215300..2216160 | - | 861 | WP_003424245.1 | acetylglutamate kinase | - |
| CDIF29747_RS10785 () | 2216175..2217392 | - | 1218 | WP_003424247.1 | bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ | - |
| CDIF29747_RS10790 () | 2217433..2218467 | - | 1035 | WP_003424249.1 | N-acetyl-gamma-glutamyl-phosphate reductase | - |
| CDIF29747_RS10795 () | 2219145..2219912 | - | 768 | WP_003424252.1 | YoaP domain-containing protein | - |
| CDIF29747_RS10800 () | 2220205..2220678 | + | 474 | WP_003424254.1 | GNAT family N-acetyltransferase | - |
| CDIF29747_RS10805 () | 2221059..2221616 | - | 558 | WP_003424257.1 | TetR/AcrR family transcriptional regulator | - |
| CDIF29747_RS10810 () | 2221874..2222572 | + | 699 | WP_003424258.1 | alpha/beta hydrolase | - |
| CDIF29747_RS19200 () | 2223261..2223404 | - | 144 | WP_003424263.1 | hypothetical protein | - |
| CDIF29747_RS10820 () | 2223558..2224025 | + | 468 | WP_003424265.1 | DUF2975 domain-containing protein | - |
| CDIF29747_RS10825 () | 2224036..2224251 | + | 216 | WP_003424267.1 | helix-turn-helix transcriptional regulator | - |
| CDIF29747_RS10830 () | 2224394..2224567 | + | 174 | WP_003424268.1 | hypothetical protein | - |
| CDIF29747_RS10840 () | 2225476..2225760 | - | 285 | WP_009905700.1 | hypothetical protein | - |
| CDIF29747_RS10845 () | 2227662..2227847 | + | 186 | WP_003424272.1 | hypothetical protein | - |
| CDIF29747_RS10850 () | 2228000..2228872 | - | 873 | WP_003424273.1 | MurR/RpiR family transcriptional regulator | - |
| CDIF29747_RS10855 () | 2229266..2229844 | - | 579 | WP_003424276.1 | methyltransferase domain-containing protein | - |
| CDIF29747_RS10860 () | 2229901..2230617 | - | 717 | WP_003424279.1 | rRNA pseudouridine synthase | - |
| CDIF29747_RS10865 () | 2230808..2231893 | + | 1086 | WP_003424281.1 | AI-2E family transporter | - |
| CDIF29747_RS10870 () | 2232047..2232721 | - | 675 | WP_003424284.1 | hypothetical protein | - |
| CDIF29747_RS10875 () | 2232918..2234210 | - | 1293 | WP_003424286.1 | diaminopimelate decarboxylase | - |
| CDIF29747_RS10880 () | 2234228..2235421 | - | 1194 | WP_003424287.1 | aspartate kinase | - |
| CDIF29747_RS10890 () | 2235782..2236399 | - | 618 | WP_003424290.1 | hypothetical protein | - |
| CDIF29747_RS10895 () | 2236569..2238269 | - | 1701 | WP_003424292.1 | hypothetical protein | - |
| CDIF29747_RS10900 () | 2238574..2239137 | - | 564 | WP_004452726.1 | hypothetical protein | - |
| CDIF29747_RS10905 () | 2239298..2240011 | - | 714 | WP_003424298.1 | hypothetical protein | - |
| CDIF29747_RS10910 () | 2240303..2241967 | + | 1665 | WP_003424313.1 | glutamine--tRNA ligase/YqeY domain fusion protein | - |
| CDIF29747_RS10915 () | 2242074..2242973 | - | 900 | WP_003424316.1 | YegS/Rv2252/BmrU family lipid kinase | - |
| CDIF29747_RS10920 () | 2243000..2243638 | - | 639 | WP_003424319.1 | lactate utilization protein | - |
| CDIF29747_RS10925 () | 2243978..2244976 | - | 999 | WP_003424321.1 | DUF4003 domain-containing protein | - |
| CDIF29747_RS10930 () | 2245074..2245649 | - | 576 | WP_003424324.1 | hypothetical protein | - |
| CDIF29747_RS10935 () | 2245966..2246229 | + | 264 | WP_009905715.1 | hypothetical protein | - |
| CDIF29747_RS10940 () | 2246649..2247026 | - | 378 | WP_003424328.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CDIF29747_RS10945 () | 2247367..2248479 | + | 1113 | WP_009905716.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| CDIF29747_RS10950 () | 2248676..2249128 | - | 453 | WP_003424333.1 | hypothetical protein | - |
| CDIF29747_RS10955 () | 2249323..2250948 | - | 1626 | WP_003424336.1 | ATP-binding cassette domain-containing protein | - |
| CDIF29747_RS10960 () | 2251286..2252305 | - | 1020 | WP_003424339.1 | molybdopterin-binding protein | - |
| CDIF29747_RS10965 () | 2252302..2252871 | - | 570 | WP_009905723.1 | molybdenum cofactor cytidylyltransferase | - |
| CDIF29747_RS10970 () | 2252989..2253711 | - | 723 | WP_003424346.1 | putative selenium-dependent hydroxylase accessory protein YqeC | - |
| CDIF29747_RS10975 () | 2253894..2255171 | - | 1278 | WP_009905725.1 | IS200-IS605 family transposase ISAsp8 | Transposase |
| CDIF29747_RS10980 () | 2255310..2257616 | - | 2307 | WP_003424352.1 | molybdopterin-dependent oxidoreductase | - |
| CDIF29747_RS10985 () | 2257609..2258403 | - | 795 | WP_003424355.1 | FAD binding domain-containing protein | - |
| CDIF29747_RS10990 () | 2258510..2259868 | - | 1359 | WP_003424358.1 | purine/pyrimidine permease | - |
| CDIF29747_RS11000 () | 2261202..2262251 | - | 1050 | WP_032510213.1 | hypothetical protein | - |
| CDIF29747_RS11005 () | 2262481..2263566 | - | 1086 | WP_009890201.1 | dihydroorotate dehydrogenase | - |
| CDIF29747_RS11010 () | 2263602..2264915 | - | 1314 | WP_003424364.1 | amidohydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|