MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104358 bp
Accession: NZ_CP019778 Location: 3395035..3499392 Organism: Escherichia coli strain NCTC86 Replicon: chromosome
Accession: NZ_CP019778 Location: 3395035..3499392 Organism: Escherichia coli strain NCTC86 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B0915_RS17385 () | 3391434..3392231 | - | 798 | WP_001522323.1 | Dr fimbrial biogenesis chaperone DraB | - |
| B0915_RS17390 () | 3392485..3392790 | - | 306 | WP_001522322.1 | AFA-III adhesin operon transcriptional regulator AfaA | - |
| B0915_RS17395 () | 3393591..3393848 | + | 258 | WP_001522321.1 | Dr hemagglutinin AFA-III operon transcriptional regulator AfaF | - |
| B0915_RS17405 () | 3394287..3394529 | - | 243 | WP_001522318.1 | hypothetical protein | - |
| B0915_RS17410 () | 3394603..3395816 | + | 1214 | WP_171844376.1 | IS3 family transposase | - |
| B0915_RS17415 () | 3396257..3396646 | - | 390 | WP_001522311.1 | hypothetical protein | - |
| B0915_RS17420 () | 3397833..3398326 | + | 494 | Protein_3187 | Transcriptional repressor MprA | VF |
| B0915_RS17425 () | 3398595..3402200 | - | 3606 | WP_001522306.1 | hypothetical protein | - |
| B0915_RS17430 () | 3402408..3403034 | - | 627 | WP_001522305.1 | hypothetical protein | - |
| B0915_RS17435 () | 3403178..3403333 | - | 156 | Protein_3190 | Rpn family recombination-promoting nuclease/putative transposase | - |
| B0915_RS26950 () | 3403438..3403761 | - | 324 | WP_157919120.1 | hypothetical protein | - |
| B0915_RS17440 () | 3403897..3404373 | + | 477 | WP_001522303.1 | ProQ/FinO family protein | - |
| B0915_RS17445 () | 3404375..3404908 | - | 534 | WP_001522302.1 | hypothetical protein | - |
| B0915_RS17450 () | 3405186..3405419 | - | 234 | WP_001522301.1 | AlpA family transcriptional regulator | - |
| B0915_RS17460 () | 3405851..3406261 | - | 411 | WP_001522299.1 | hypothetical protein | - |
| B0915_RS17465 () | 3406258..3406641 | - | 384 | WP_016234003.1 | hypothetical protein | - |
| B0915_RS17470 () | 3406809..3407374 | - | 566 | Protein_3197 | inovirus Gp2 family protein | - |
| B0915_RS17475 () | 3407570..3407764 | + | 195 | WP_000236756.1 | hypothetical protein | - |
| B0915_RS26655 () | 3407891..3408140 | - | 250 | Protein_3199 | hypothetical protein | - |
| B0915_RS26670 () | 3409110..3409316 | + | 207 | WP_001095913.1 | AlpA family transcriptional regulator | - |
| B0915_RS17490 () | 3409404..3410012 | + | 609 | WP_077634145.1 | hypothetical protein | - |
| B0915_RS17510 () | 3411999..3413154 | + | 1156 | Protein_3202 | hypothetical protein | - |
| B0915_RS17515 () | 3413238..3414110 | + | 873 | WP_068879482.1 | GTPase family protein | - |
| B0915_RS17520 () | 3414442..3417138 | + | 2697 | Protein_3204 | AIDA repeat-containing protein | - |
| B0915_RS17525 () | 3417225..3417971 | - | 747 | Protein_3205 | IS21-like element ISEc12 family helper ATPase IstB | - |
| B0915_RS17530 () | 3417986..3419527 | - | 1542 | WP_001620815.1 | IS21 family transposase ISEc12 | Transposase |
| B0915_RS17535 () | 3419722..3420150 | + | 429 | Protein_3207 | autotransporter domain-containing protein | - |
| B0915_RS17545 () | 3420467..3421285 | + | 819 | WP_001522287.1 | DUF945 domain-containing protein | - |
| B0915_RS26955 () | 3421285..3421461 | + | 177 | WP_001522285.1 | hypothetical protein | - |
| B0915_RS17550 () | 3421556..3422029 | + | 474 | WP_001522284.1 | antirestriction protein | - |
| B0915_RS17555 () | 3422044..3422520 | + | 477 | WP_001186724.1 | RadC family protein | - |
| B0915_RS17560 () | 3422701..3424200 | + | 1500 | WP_001522281.1 | IS21 family transposase ISEc10 | Transposase |
| B0915_RS17565 () | 3424197..3424952 | + | 756 | WP_001522280.1 | IS21 family transposase ISEc10 | Transposase |
| B0915_RS17570 () | 3425004..3425225 | + | 222 | WP_023909484.1 | DUF987 domain-containing protein | - |
| B0915_RS17575 () | 3425305..3425679 | + | 375 | WP_001522275.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| B0915_RS17580 () | 3425726..3426100 | + | 375 | WP_023909482.1 | TA system toxin CbtA family protein | Toxin Detail |
| B0915_RS17585 () | 3426097..3426587 | + | 491 | Protein_3217 | hypothetical protein | - |
| B0915_RS17590 () | 3426599..3426796 | + | 198 | WP_001522268.1 | DUF957 domain-containing protein | - |
| B0915_RS17595 () | 3426881..3427747 | + | 867 | WP_023909479.1 | DUF4942 domain-containing protein | - |
| B0915_RS17600 () | 3427819..3428082 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| B0915_RS17605 () | 3428079..3428405 | + | 327 | WP_001522265.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B0915_RS26960 () | 3428897..3429052 | + | 156 | WP_000729639.1 | hypothetical protein | - |
| B0915_RS17615 () | 3429863..3430846 | + | 984 | WP_066008910.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| B0915_RS17620 () | 3430918..3432066 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| B0915_RS17625 () | 3432090..3433766 | + | 1677 | WP_066008909.1 | Polysialic acid transport protein KpsD | VF |
| B0915_RS17630 () | 3433776..3434516 | + | 741 | WP_001327873.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| B0915_RS17635 () | 3434513..3436540 | + | 2028 | WP_000579529.1 | hypothetical protein | VF |
| B0915_RS17640 () | 3436575..3437813 | + | 1239 | WP_001161824.1 | hypothetical protein | VF |
| B0915_RS17645 () | 3437975..3438970 | - | 996 | WP_001208051.1 | hypothetical protein | - |
| B0915_RS17650 () | 3438976..3440004 | - | 1029 | WP_001044673.1 | hypothetical protein | VF |
| B0915_RS17655 () | 3440107..3443905 | - | 3799 | Protein_3231 | Teichoic acid glycerol-phosphate transferase | VF |
| B0915_RS17660 () | 3443959..3445194 | - | 1236 | WP_000668515.1 | hypothetical protein | - |
| B0915_RS17665 () | 3445210..3445606 | - | 397 | Protein_3233 | pantoate--beta-alanine ligase | - |
| B0915_RS17670 () | 3445618..3446289 | - | 672 | WP_000590253.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| B0915_RS17675 () | 3446286..3447062 | - | 777 | WP_000124284.1 | Polysialic acid transport protein KpsM | VF |
| B0915_RS17680 () | 3448236..3448772 | - | 537 | WP_000942819.1 | Type II secretion system protein M | VF |
| B0915_RS17685 () | 3448774..3449951 | - | 1178 | Protein_3237 | Type II secretion system protein L | VF |
| B0915_RS17690 () | 3449948..3450364 | - | 417 | Protein_3238 | Putative type II secretion system protein K | VF |
| B0915_RS17705 () | 3450545..3451891 | - | 1347 | WP_071836851.1 | IS4 family transposase IS4 | Transposase |
| B0915_RS17710 () | 3452027..3453709 | - | 1683 | WP_021519491.1 | glycolate permease GlcA | - |
| B0915_RS17715 () | 3454064..3456234 | - | 2171 | Protein_3241 | malate synthase G | - |
| B0915_RS17720 () | 3456256..3456660 | - | 405 | WP_000853256.1 | protein GlcG | - |
| B0915_RS17725 () | 3456665..3457888 | - | 1224 | WP_001194816.1 | glycolate oxidase subunit GlcF | - |
| B0915_RS17730 () | 3457899..3458951 | - | 1053 | WP_000943077.1 | glycolate oxidase subunit GlcE | - |
| B0915_RS17735 () | 3458951..3460450 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| B0915_RS17740 () | 3460694..3461458 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| B0915_RS17745 () | 3461465..3462607 | - | 1143 | WP_001300526.1 | DNA-binding protein | - |
| B0915_RS17750 () | 3462984..3464705 | + | 1722 | WP_206751254.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| B0915_RS17755 () | 3464702..3465616 | + | 915 | WP_001077166.1 | NAD-dependent epimerase/dehydratase family protein | - |
| B0915_RS17760 () | 3465648..3465896 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| B0915_RS17765 () | 3465896..3467068 | + | 1173 | WP_000524970.1 | 8-amino-7-oxononanoate synthase | VF |
| B0915_RS17770 () | 3467103..3468182 | - | 1080 | WP_001318997.1 | LPS export ABC transporter permease LptG | - |
| B0915_RS17775 () | 3468179..3469249 | - | 1071 | WP_000779636.1 | LPS export ABC transporter permease LptF | - |
| B0915_RS17780 () | 3469280..3469840 | - | 561 | WP_001298770.1 | YtfJ family protein | - |
| B0915_RS17785 () | 3469852..3470676 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| B0915_RS17790 () | 3470676..3472025 | - | 1350 | WP_000896896.1 | lipopolysaccharide biosynthesis protein | - |
| B0915_RS17795 () | 3472071..3472829 | - | 759 | WP_000339531.1 | ATP-binding protein | - |
| B0915_RS17800 () | 3472861..3473574 | - | 714 | WP_001076243.1 | thymidylate kinase | - |
| B0915_RS17805 () | 3473748..3474440 | + | 693 | WP_001190781.1 | thymidylate kinase | - |
| B0915_RS17810 () | 3474489..3475988 | - | 1500 | WP_000933250.1 | inorganic phosphate transporter PitB | - |
| B0915_RS17815 () | 3476280..3478139 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| B0915_RS17820 () | 3478344..3479210 | + | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| B0915_RS17825 () | 3479333..3479581 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| B0915_RS17830 () | 3479594..3479935 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| B0915_RS17835 () | 3479928..3480416 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| B0915_RS17840 () | 3480409..3480903 | - | 495 | WP_001221939.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| B0915_RS17845 () | 3480903..3482606 | - | 1704 | WP_000083052.1 | hydrogenase 2 large subunit | - |
| B0915_RS17850 () | 3482603..3483781 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| B0915_RS17855 () | 3483771..3484757 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| B0915_RS17860 () | 3484760..3485878 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| B0915_RS17870 () | 3486067..3486354 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| B0915_RS17875 () | 3486473..3487357 | - | 885 | Protein_3272 | dienelactone hydrolase family protein | - |
| B0915_RS17885 () | 3487514..3488554 | + | 1041 | WP_000262172.1 | L-glyceraldehyde 3-phosphate reductase | - |
| B0915_RS17890 () | 3488594..3489088 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| B0915_RS17895 () | 3489279..3490163 | + | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| B0915_RS17900 () | 3490435..3490860 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| B0915_RS17905 () | 3490867..3491601 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| B0915_RS17915 () | 3491853..3493040 | + | 1188 | WP_066009680.1 | cystathionine beta-lyase | - |
| B0915_RS17920 () | 3493180..3493839 | + | 660 | WP_000268419.1 | DedA family protein | - |
| B0915_RS17925 () | 3493879..3494778 | - | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| B0915_RS17930 () | 3494972..3496135 | + | 1164 | WP_001058802.1 | alcohol dehydrogenase | - |
| B0915_RS17935 () | 3496240..3497067 | + | 828 | WP_078046077.1 | 2,5-didehydrogluconate reductase DkgA | - |
| B0915_RS17940 () | 3497267..3498193 | + | 927 | WP_000691619.1 | YbjP/YqhG family protein | - |
| B0915_RS17945 () | 3498244..3498501 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| B0915_RS17950 () | 3498544..3500763 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| B0915_RS17955 () | 3500874..3502286 | - | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| B0915_RS17960 () | 3502361..3503098 | - | 738 | WP_000965722.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|