MGE detailed information
MGE type: IScluster/Tn MGE length: 16037 bp
Accession: NZ_CP019733 Location: 52136..68172 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 Replicon: plasmid unnamed
Accession: NZ_CP019733 Location: 52136..68172 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1F85_RS31480 () | 48605..48829 | - | 225 | Protein_48 | transposase | - |
| B1F85_RS31485 () | 49570..49815 | + | 246 | WP_017685036.1 | hypothetical protein | - |
| B1F85_RS31495 () | 50370..50786 | + | 417 | WP_017685037.1 | hypothetical protein | - |
| B1F85_RS31500 () | 50824..51054 | + | 231 | WP_017685038.1 | hypothetical protein | - |
| B1F85_RS31505 () | 51144..51683 | + | 540 | WP_017685039.1 | hypothetical protein | - |
| B1F85_RS31515 () | 53911..54090 | + | 180 | WP_017685223.1 | hypothetical protein | - |
| B1F85_RS31520 () | 54359..54583 | + | 225 | WP_017699623.1 | carbon storage regulator | - |
| B1F85_RS31525 () | 54613..55026 | + | 414 | WP_017685173.1 | TraR/DksA family transcriptional regulator | - |
| B1F85_RS31530 () | 55064..55285 | + | 222 | WP_004666801.1 | hypothetical protein | - |
| B1F85_RS31540 () | 55611..56231 | - | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B1F85_RS31545 () | 56619..57029 | + | 411 | Protein_59 | ParA family protein | - |
| B1F85_RS31550 () | 57082..58263 | - | 1182 | Protein_60 | IS3 family transposase ISPsy28 | Transposase |
| B1F85_RS31555 () | 58556..59095 | - | 540 | WP_017685167.1 | hypothetical protein | - |
| B1F85_RS31560 () | 59508..59762 | - | 255 | WP_003381350.1 | hypothetical protein | - |
| B1F85_RS31565 () | 59789..60049 | - | 261 | Protein_63 | hypothetical protein | - |
| B1F85_RS31570 () | 60111..61288 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| B1F85_RS31575 () | 61310..61648 | - | 339 | WP_017685230.1 | hypothetical protein | - |
| B1F85_RS32825 () | 61785..62072 | - | 288 | WP_153303634.1 | hypothetical protein | - |
| B1F85_RS31580 () | 62154..62546 | - | 393 | WP_017685201.1 | hypothetical protein | - |
| B1F85_RS31585 () | 62724..63791 | + | 1068 | WP_074556923.1 | IS630 family transposase ISPsy32 | Transposase |
| B1F85_RS31590 () | 63989..64951 | - | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| B1F85_RS31595 () | 65292..65540 | + | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| B1F85_RS31600 () | 65556..65906 | + | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B1F85_RS31605 () | 66038..66622 | - | 585 | Protein_72 | Oxygen regulatory protein NreC | VF |
| B1F85_RS31615 () | 68329..68634 | + | 306 | WP_017706770.1 | type IV secretion system protein | - |
| B1F85_RS31620 () | 68624..69433 | + | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| B1F85_RS31625 () | 69420..70790 | + | 1371 | WP_017684943.1 | TrbI/VirB10 family protein | - |
| B1F85_RS31630 () | 70800..71831 | + | 1032 | WP_017684944.1 | P-type DNA transfer ATPase VirB11 | - |
| B1F85_RS31635 () | 71841..72197 | + | 357 | WP_017684945.1 | hypothetical protein | - |
| B1F85_RS31640 () | 72446..73069 | + | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|