MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74460 bp
Accession: NZ_CP019733 Location: 1..74460 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 Replicon: plasmid unnamed
Accession: NZ_CP019733 Location: 1..74460 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 14.08 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1F85_RS31165 () | 978..1340 | + | 363 | WP_015060690.1 | IncN plasmid killer protein | - |
| B1F85_RS31170 () | 1368..3266 | + | 1899 | WP_017684961.1 | DNA topoisomerase III | - |
| B1F85_RS31175 () | 3289..6322 | - | 3034 | Protein_3 | Tn3-like element ISPsy42 family transposase | - |
| B1F85_RS31180 () | 6351..6923 | - | 573 | WP_004666660.1 | Tn3 family transposase ISPsy42 | Transposase |
| B1F85_RS31185 () | 7104..7355 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| B1F85_RS31190 () | 7352..7748 | + | 397 | Protein_6 | type II toxin-antitoxin system VapC family toxin | - |
| B1F85_RS31200 () | 7909..8286 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| B1F85_RS31205 () | 8354..8590 | - | 237 | Protein_8 | Tn3 family transposase ISPsy42 | Transposase |
| B1F85_RS31215 () | 9049..10680 | - | 1632 | WP_020358614.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| B1F85_RS31220 () | 10854..11399 | + | 546 | Protein_10 | IS5 family transposase ISPsy19 | Transposase |
| B1F85_RS31235 () | 12430..12807 | + | 378 | WP_003344294.1 | hypothetical protein | - |
| B1F85_RS31240 () | 12854..13690 | + | 837 | WP_017684524.1 | DUF945 domain-containing protein | - |
| B1F85_RS31245 () | 13758..13958 | + | 201 | WP_017684525.1 | hypothetical protein | - |
| B1F85_RS31250 () | 14024..14302 | - | 279 | WP_017684526.1 | hypothetical protein | - |
| B1F85_RS31260 () | 14600..14944 | - | 345 | WP_017684528.1 | hypothetical protein | - |
| B1F85_RS31265 () | 15190..15519 | + | 330 | WP_003344297.1 | ribbon-helix-helix protein, CopG family | - |
| B1F85_RS31270 () | 15530..17485 | + | 1956 | WP_017684529.1 | Protein TraI | Relaxase |
| B1F85_RS31280 () | 17780..18622 | - | 843 | WP_005734710.1 | Transcriptional activator protein LasR | VF |
| B1F85_RS31285 () | 18680..19273 | - | 594 | WP_005734709.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| B1F85_RS31290 () | 19270..20736 | - | 1467 | WP_005734708.1 | 2-amino-4-deoxychorismate synthase | VF |
| B1F85_RS31295 () | 21366..22718 | + | 1353 | WP_017684531.1 | phenylacetate--CoA ligase family protein | - |
| B1F85_RS31300 () | 22725..23270 | + | 546 | WP_005734707.1 | hypothetical protein | - |
| B1F85_RS31305 () | 23272..23955 | + | 684 | WP_003319174.1 | iron-containing redox enzyme family protein | - |
| B1F85_RS31310 () | 23959..24576 | + | 618 | WP_017699540.1 | flavodoxin family protein | - |
| B1F85_RS31315 () | 24579..25487 | + | 909 | WP_017685046.1 | EamA family transporter | - |
| B1F85_RS31320 () | 25474..26424 | + | 951 | WP_017685047.1 | alpha/beta fold hydrolase | - |
| B1F85_RS31335 () | 27401..28693 | - | 1293 | WP_017685048.1 | glycoside hydrolase family 68 protein | - |
| B1F85_RS31345 () | 28961..29581 | + | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B1F85_RS31350 () | 29600..29896 | - | 297 | WP_017685207.1 | hypothetical protein | - |
| B1F85_RS32815 () | 30547..33926 | + | 3380 | Protein_30 | type IV secretory system conjugative DNA transfer family protein | - |
| B1F85_RS31385 () | 33954..34376 | + | 423 | WP_017684688.1 | hypothetical protein | - |
| B1F85_RS31390 () | 34397..34960 | + | 564 | WP_010206573.1 | hypothetical protein | - |
| B1F85_RS31395 () | 35148..35576 | + | 429 | WP_017684687.1 | GntR family transcriptional regulator | - |
| B1F85_RS31400 () | 35656..35884 | + | 229 | Protein_34 | hypothetical protein | - |
| B1F85_RS31410 () | 36285..37599 | + | 1315 | Protein_35 | replication initiation protein | - |
| B1F85_RS31415 () | 37811..38125 | + | 315 | WP_017684684.1 | HU family DNA-binding protein | - |
| B1F85_RS31425 () | 38719..39237 | + | 519 | WP_017684683.1 | DUF4113 domain-containing protein | - |
| B1F85_RS33075 () | 39297..39449 | - | 153 | WP_153303635.1 | hypothetical protein | - |
| B1F85_RS31435 () | 39924..40361 | + | 438 | WP_074291445.1 | DUF4113 domain-containing protein | - |
| B1F85_RS31440 () | 40937..41188 | - | 252 | WP_020316509.1 | ribbon-helix-helix protein, CopG family | - |
| B1F85_RS31445 () | 41296..41952 | - | 657 | WP_017685030.1 | AAA family ATPase | - |
| B1F85_RS32820 () | 42068..42223 | + | 156 | WP_153303633.1 | hypothetical protein | - |
| B1F85_RS31455 () | 42787..43335 | - | 549 | WP_017685033.1 | hypothetical protein | - |
| B1F85_RS31460 () | 43432..43893 | + | 462 | WP_020365478.1 | SOS response-associated peptidase family protein | - |
| B1F85_RS31465 () | 44163..44936 | - | 774 | Protein_45 | type III effector | - |
| B1F85_RS31470 () | 45040..45642 | - | 603 | Protein_46 | type III effector | - |
| B1F85_RS31475 () | 46017..48461 | + | 2445 | WP_017685035.1 | hypothetical protein | - |
| B1F85_RS31480 () | 48605..48829 | - | 225 | Protein_48 | transposase | - |
| B1F85_RS31485 () | 49570..49815 | + | 246 | WP_017685036.1 | hypothetical protein | - |
| B1F85_RS31495 () | 50370..50786 | + | 417 | WP_017685037.1 | hypothetical protein | - |
| B1F85_RS31500 () | 50824..51054 | + | 231 | WP_017685038.1 | hypothetical protein | - |
| B1F85_RS31505 () | 51144..51683 | + | 540 | WP_017685039.1 | hypothetical protein | - |
| B1F85_RS31515 () | 53911..54090 | + | 180 | WP_017685223.1 | hypothetical protein | - |
| B1F85_RS31520 () | 54359..54583 | + | 225 | WP_017699623.1 | carbon storage regulator | - |
| B1F85_RS31525 () | 54613..55026 | + | 414 | WP_017685173.1 | TraR/DksA family transcriptional regulator | - |
| B1F85_RS31530 () | 55064..55285 | + | 222 | WP_004666801.1 | hypothetical protein | - |
| B1F85_RS31540 () | 55611..56231 | - | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B1F85_RS31545 () | 56619..57029 | + | 411 | Protein_59 | ParA family protein | - |
| B1F85_RS31550 () | 57082..58263 | - | 1182 | Protein_60 | IS3 family transposase ISPsy28 | Transposase |
| B1F85_RS31555 () | 58556..59095 | - | 540 | WP_017685167.1 | hypothetical protein | - |
| B1F85_RS31560 () | 59508..59762 | - | 255 | WP_003381350.1 | hypothetical protein | - |
| B1F85_RS31565 () | 59789..60049 | - | 261 | Protein_63 | hypothetical protein | - |
| B1F85_RS31570 () | 60111..61288 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| B1F85_RS31575 () | 61310..61648 | - | 339 | WP_017685230.1 | hypothetical protein | - |
| B1F85_RS32825 () | 61785..62072 | - | 288 | WP_153303634.1 | hypothetical protein | - |
| B1F85_RS31580 () | 62154..62546 | - | 393 | WP_017685201.1 | hypothetical protein | - |
| B1F85_RS31585 () | 62724..63791 | + | 1068 | WP_074556923.1 | IS630 family transposase ISPsy32 | Transposase |
| B1F85_RS31590 () | 63989..64951 | - | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| B1F85_RS31595 () | 65292..65540 | + | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| B1F85_RS31600 () | 65556..65906 | + | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B1F85_RS31605 () | 66038..66622 | - | 585 | Protein_72 | Oxygen regulatory protein NreC | VF |
| B1F85_RS31615 () | 68329..68634 | + | 306 | WP_017706770.1 | hypothetical protein | VF |
| B1F85_RS31620 () | 68624..69433 | + | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| B1F85_RS31625 () | 69420..70790 | + | 1371 | WP_017684943.1 | Type IV secretion system protein virB10 | VF |
| B1F85_RS31630 () | 70800..71831 | + | 1032 | WP_017684944.1 | Type IV secretion system protein VirB11 | VF |
| B1F85_RS31635 () | 71841..72197 | + | 357 | WP_017684945.1 | hypothetical protein | - |
| B1F85_RS31640 () | 72446..73069 | + | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
| B1F85_RS31645 () | 73515..73745 | + | 231 | WP_017684963.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|