MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74460 bp
Accession: NZ_CP019731 Location: 1..74460 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 Replicon: plasmid unnamed
Accession: NZ_CP019731 Location: 1..74460 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1R35_RS31150 () | 978..1340 | + | 363 | WP_015060690.1 | IncN plasmid killer protein | - |
| B1R35_RS31155 () | 1368..3266 | + | 1899 | Protein_2 | type IA DNA topoisomerase | - |
| B1R35_RS31160 () | 3291..6333 | - | 3043 | Protein_3 | Tn3 family transposase | - |
| B1R35_RS31165 () | 6362..6936 | - | 575 | Protein_4 | Tn3 family transposase ISPsy42 | Transposase |
| B1R35_RS31170 () | 7116..7367 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| B1R35_RS31175 () | 7364..7759 | + | 396 | WP_004666661.1 | type II toxin-antitoxin system VapC family toxin | - |
| B1R35_RS31185 () | 7920..8297 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| B1R35_RS31190 () | 8365..8601 | - | 237 | Protein_8 | Tn3 family transposase ISPsy42 | Transposase |
| B1R35_RS31200 () | 9060..10691 | - | 1632 | WP_020358614.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| B1R35_RS31205 () | 10865..11410 | + | 546 | Protein_10 | IS5 family transposase ISPsy19 | Transposase |
| B1R35_RS31220 () | 12441..12818 | + | 378 | WP_003344294.1 | hypothetical protein | - |
| B1R35_RS31225 () | 12865..13701 | + | 837 | WP_017684524.1 | DUF945 domain-containing protein | - |
| B1R35_RS31230 () | 13769..13969 | + | 201 | WP_017684525.1 | hypothetical protein | - |
| B1R35_RS31235 () | 14035..14313 | - | 279 | WP_017684526.1 | hypothetical protein | - |
| B1R35_RS31245 () | 14611..14955 | - | 345 | WP_017684528.1 | hypothetical protein | - |
| B1R35_RS31250 () | 15201..15530 | + | 330 | WP_003344297.1 | ribbon-helix-helix protein, CopG family | - |
| B1R35_RS31255 () | 15541..17496 | + | 1956 | WP_017684529.1 | Protein TraI | Relaxase |
| B1R35_RS31265 () | 17791..18633 | - | 843 | WP_005734710.1 | Transcriptional activator protein LasR | VF |
| B1R35_RS31270 () | 18691..19284 | - | 594 | WP_005734709.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| B1R35_RS31275 () | 19281..20747 | - | 1467 | WP_005734708.1 | 2-amino-4-deoxychorismate synthase | VF |
| B1R35_RS31280 () | 21377..22729 | + | 1353 | WP_017684531.1 | phenylacetate--CoA ligase family protein | - |
| B1R35_RS31285 () | 22736..23281 | + | 546 | WP_005734707.1 | hypothetical protein | - |
| B1R35_RS31290 () | 23283..23966 | + | 684 | WP_003319174.1 | iron-containing redox enzyme family protein | - |
| B1R35_RS31295 () | 23970..24587 | + | 618 | WP_017699540.1 | flavodoxin family protein | - |
| B1R35_RS31300 () | 24590..25498 | + | 909 | WP_017685046.1 | EamA family transporter | - |
| B1R35_RS31305 () | 25485..26435 | + | 951 | WP_017685047.1 | alpha/beta fold hydrolase | - |
| B1R35_RS31320 () | 27412..28704 | - | 1293 | WP_017685048.1 | glycoside hydrolase family 68 protein | - |
| B1R35_RS31330 () | 28972..29592 | + | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B1R35_RS31335 () | 29611..29907 | - | 297 | WP_017685207.1 | hypothetical protein | - |
| B1R35_RS31350 () | 30558..33932 | + | 3375 | WP_017684689.1 | hypothetical protein | VF |
| B1R35_RS31355 () | 33960..34382 | + | 423 | WP_017684688.1 | hypothetical protein | - |
| B1R35_RS31360 () | 34403..34966 | + | 564 | WP_010206573.1 | hypothetical protein | - |
| B1R35_RS31365 () | 35154..35582 | + | 429 | WP_017684687.1 | GntR family transcriptional regulator | - |
| B1R35_RS31370 () | 35662..35889 | + | 228 | WP_017684686.1 | hypothetical protein | - |
| B1R35_RS31375 () | 36287..37600 | + | 1314 | WP_017684685.1 | replication initiation protein | - |
| B1R35_RS31380 () | 37812..38126 | + | 315 | WP_017684684.1 | HU family DNA-binding protein | - |
| B1R35_RS31390 () | 38720..39238 | + | 519 | WP_017684683.1 | DUF4113 domain-containing protein | - |
| B1R35_RS32745 () | 39298..39450 | - | 153 | WP_153303635.1 | hypothetical protein | - |
| B1R35_RS31400 () | 39925..40362 | + | 438 | WP_074291445.1 | DUF4113 domain-containing protein | - |
| B1R35_RS31405 () | 40938..41189 | - | 252 | WP_020316509.1 | ribbon-helix-helix protein, CopG family | - |
| B1R35_RS31410 () | 41297..41953 | - | 657 | WP_017685030.1 | AAA family ATPase | - |
| B1R35_RS32750 () | 42069..42224 | + | 156 | WP_153303633.1 | hypothetical protein | - |
| B1R35_RS31420 () | 42788..43336 | - | 549 | WP_017685033.1 | hypothetical protein | - |
| B1R35_RS31425 () | 43433..43894 | + | 462 | WP_020365478.1 | SOS response-associated peptidase family protein | - |
| B1R35_RS31430 () | 44164..44937 | - | 774 | Protein_45 | type III effector | - |
| B1R35_RS31435 () | 45041..45643 | - | 603 | Protein_46 | type III effector | - |
| B1R35_RS31440 () | 46018..48462 | + | 2445 | WP_017685035.1 | hypothetical protein | - |
| B1R35_RS31445 () | 48606..48830 | - | 225 | Protein_48 | transposase | - |
| B1R35_RS31450 () | 49571..49816 | + | 246 | WP_017685036.1 | hypothetical protein | - |
| B1R35_RS31460 () | 50371..50787 | + | 417 | WP_017685037.1 | hypothetical protein | - |
| B1R35_RS31465 () | 50825..51055 | + | 231 | WP_017685038.1 | hypothetical protein | - |
| B1R35_RS31470 () | 51145..51684 | + | 540 | WP_017685039.1 | hypothetical protein | - |
| B1R35_RS31480 () | 53912..54091 | + | 180 | WP_017685223.1 | hypothetical protein | - |
| B1R35_RS31485 () | 54359..54583 | + | 225 | WP_017699623.1 | carbon storage regulator | - |
| B1R35_RS31490 () | 54613..55026 | + | 414 | WP_017685173.1 | TraR/DksA family transcriptional regulator | - |
| B1R35_RS31495 () | 55064..55285 | + | 222 | WP_004666801.1 | hypothetical protein | - |
| B1R35_RS31505 () | 55611..56231 | - | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B1R35_RS31510 () | 56619..57029 | + | 411 | Protein_59 | ParA family protein | - |
| B1R35_RS31515 () | 57082..58263 | - | 1182 | Protein_60 | IS3 family transposase ISPsy28 | Transposase |
| B1R35_RS31520 () | 58556..59095 | - | 540 | WP_017685167.1 | hypothetical protein | - |
| B1R35_RS31525 () | 59508..59762 | - | 255 | WP_003381350.1 | hypothetical protein | - |
| B1R35_RS31530 () | 59789..60049 | - | 261 | Protein_63 | hypothetical protein | - |
| B1R35_RS31535 () | 60111..61288 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| B1R35_RS31540 () | 61310..61648 | - | 339 | WP_017685230.1 | hypothetical protein | - |
| B1R35_RS32755 () | 61785..62072 | - | 288 | WP_153303634.1 | hypothetical protein | - |
| B1R35_RS31545 () | 62154..62546 | - | 393 | WP_017685201.1 | hypothetical protein | - |
| B1R35_RS31550 () | 62724..63791 | + | 1068 | WP_074556923.1 | IS630 family transposase ISPsy32 | Transposase |
| B1R35_RS31555 () | 63989..64951 | - | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| B1R35_RS31560 () | 65292..65540 | + | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| B1R35_RS31565 () | 65556..65906 | + | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B1R35_RS31570 () | 66038..66622 | - | 585 | Protein_72 | Oxygen regulatory protein NreC | VF |
| B1R35_RS31580 () | 68329..68634 | + | 306 | WP_017706770.1 | hypothetical protein | VF |
| B1R35_RS31585 () | 68624..69433 | + | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| B1R35_RS31590 () | 69420..70790 | + | 1371 | WP_017684943.1 | Type IV secretion system protein virB10 | VF |
| B1R35_RS31595 () | 70800..71831 | + | 1032 | WP_017684944.1 | Type IV secretion system protein VirB11 | VF |
| B1R35_RS31600 () | 71841..72197 | + | 357 | WP_017684945.1 | hypothetical protein | - |
| B1R35_RS31605 () | 72446..73069 | + | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
| B1R35_RS31610 () | 73515..73745 | + | 231 | WP_017684963.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|