MGE detailed information
MGE type: Genomic_island MGE length: 58832 bp
Accession: NZ_CP019730 Location: 729365..788196 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 Replicon: chromosome
Accession: NZ_CP019730 Location: 729365..788196 Organism: Pseudomonas syringae pv. actinidiae strain CRAFRU 12.29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1R35_RS03710 () | 726373..726924 | - | 552 | WP_017684234.1 | DUF4123 domain-containing protein | - |
| B1R35_RS03715 () | 726921..728987 | - | 2067 | WP_017684235.1 | type VI secretion system tip protein VgrG | - |
| B1R35_RS03720 () | 729485..730708 | + | 1224 | WP_003379982.1 | type III secretion system effector protein | - |
| B1R35_RS03725 () | 730825..732357 | - | 1533 | WP_017684236.1 | hypothetical protein | - |
| B1R35_RS03735 () | 733501..733737 | - | 237 | WP_017684237.1 | carbon storage regulator | - |
| B1R35_RS03740 () | 733939..734517 | - | 579 | WP_017684238.1 | AAA family ATPase | - |
| B1R35_RS03745 () | 734517..735173 | - | 657 | WP_032609899.1 | hypothetical protein | - |
| B1R35_RS03750 () | 735210..736412 | - | 1203 | WP_017684239.1 | aspartate aminotransferase family protein | - |
| B1R35_RS03755 () | 736453..737487 | - | 1035 | WP_017684240.1 | sulfotransferase | - |
| B1R35_RS03760 () | 737505..738425 | - | 921 | WP_020313563.1 | TauD/TfdA family dioxygenase | - |
| B1R35_RS03765 () | 738571..739218 | - | 648 | WP_017703697.1 | histidine phosphatase family protein | - |
| B1R35_RS03770 () | 739559..740494 | - | 936 | WP_017704392.1 | syringolide biosynthetic protein AvrD1 | - |
| B1R35_RS03775 () | 740769..741402 | - | 634 | Protein_698 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| B1R35_RS03780 () | 741443..741862 | - | 420 | WP_017684243.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| B1R35_RS03785 () | 741859..742116 | - | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| B1R35_RS03790 () | 742471..743127 | + | 657 | WP_017684244.1 | hypothetical protein | - |
| B1R35_RS03795 () | 743175..743429 | + | 255 | WP_003381350.1 | hypothetical protein | - |
| B1R35_RS03805 () | 744246..745208 | - | 963 | WP_003383614.1 | type III effector | - |
| B1R35_RS03820 () | 746578..747645 | + | 1068 | WP_074556883.1 | IS630 family transposase ISPsy32 | Transposase |
| B1R35_RS03825 () | 747856..748398 | + | 543 | WP_078983215.1 | YopT-type cysteine protease domain-containing protein | - |
| B1R35_RS03830 () | 748437..748625 | + | 189 | Protein_706 | helix-turn-helix domain-containing protein | - |
| B1R35_RS03835 () | 748689..748856 | + | 168 | Protein_707 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| B1R35_RS03840 () | 748958..750025 | + | 1068 | WP_032685463.1 | IS630 family transposase ISPsy32 | Transposase |
| B1R35_RS03845 () | 750111..750497 | + | 387 | WP_017685026.1 | CesT family type III secretion system chaperone | - |
| B1R35_RS03855 () | 750597..751634 | + | 1038 | WP_110455589.1 | hypothetical protein | - |
| B1R35_RS03865 () | 752104..752664 | + | 561 | WP_005782565.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| B1R35_RS03870 () | 752648..754306 | + | 1659 | WP_017685028.1 | IS481 family transposase ISAzs36 | Transposase |
| B1R35_RS03875 () | 754296..755267 | + | 972 | WP_017685029.1 | ExeA family protein | - |
| B1R35_RS03880 () | 755545..756612 | + | 1068 | WP_074556885.1 | IS630 family transposase ISPsy32 | Transposase |
| B1R35_RS03885 () | 756749..757405 | + | 657 | WP_004666980.1 | YopT-type cysteine protease domain-containing protein | - |
| B1R35_RS03890 () | 757299..757702 | - | 404 | Protein_716 | recombinase family protein | - |
| B1R35_RS03895 () | 757923..758201 | - | 279 | Protein_717 | IS91 family transposase IS801 | Transposase |
| B1R35_RS03900 () | 758395..758790 | + | 396 | WP_017685097.1 | CesT family type III secretion system chaperone | - |
| B1R35_RS31710 () | 758803..759645 | + | 843 | WP_074291504.1 | type III effector HopF2 | - |
| B1R35_RS32800 () | 760568..761098 | + | 531 | WP_005752338.1 | hypothetical protein | - |
| B1R35_RS03920 () | 761521..762117 | + | 597 | WP_003381935.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| B1R35_RS03925 () | 762107..762265 | + | 159 | WP_003381934.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| B1R35_RS03930 () | 762308..762688 | + | 381 | WP_017684874.1 | hypothetical protein | - |
| B1R35_RS03935 () | 762703..762954 | + | 252 | WP_017684873.1 | hypothetical protein | - |
| B1R35_RS03940 () | 763165..763389 | + | 225 | WP_003407134.1 | carbon storage regulator | - |
| B1R35_RS03945 () | 763572..763802 | + | 231 | WP_017684872.1 | hypothetical protein | - |
| B1R35_RS03950 () | 763929..764801 | + | 873 | WP_017684871.1 | DUF3800 domain-containing protein | - |
| B1R35_RS03960 () | 765486..766505 | - | 1020 | WP_017684870.1 | tyrosine phosphatase | - |
| B1R35_RS03965 () | 766912..767304 | + | 393 | WP_017684869.1 | CesT family type III secretion system chaperone | - |
| B1R35_RS03970 () | 767321..768163 | + | 843 | WP_020362659.1 | type III effector HopF2 | - |
| B1R35_RS03985 () | 769028..769582 | + | 555 | WP_003381924.1 | hypothetical protein | - |
| B1R35_RS03995 () | 770478..771233 | - | 756 | WP_017699032.1 | IS21 family transposase ISPsy41 | Transposase |
| B1R35_RS04000 () | 771254..772768 | - | 1515 | WP_051120727.1 | IS21 family transposase ISPsy41 | Transposase |
| B1R35_RS04010 () | 773098..773892 | - | 795 | WP_017685181.1 | hypothetical protein | - |
| B1R35_RS04020 () | 774849..775916 | - | 1068 | WP_032685463.1 | IS630 family transposase ISPsy32 | Transposase |
| B1R35_RS04025 () | 776061..777368 | + | 1308 | WP_017684148.1 | hypothetical protein | - |
| B1R35_RS04030 () | 777513..778436 | - | 924 | WP_017684147.1 | hypothetical protein | - |
| B1R35_RS04035 () | 779091..779336 | - | 246 | WP_017684146.1 | Polyketide synthase PksN | VF |
| B1R35_RS04040 () | 779372..780421 | - | 1050 | WP_017684145.1 | LLM class flavin-dependent oxidoreductase | - |
| B1R35_RS04045 () | 780498..785963 | - | 5466 | WP_017684144.1 | Chondramide synthase cmdD | VF |
| B1R35_RS04050 () | 786619..787893 | + | 1275 | WP_017684143.1 | MFS transporter | - |
| B1R35_RS04055 () | 787975..788196 | + | 222 | WP_017684142.1 | Protein MbtH | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|