MGE detailed information
MGE type: Prophage MGE length: 56971 bp
Accession: NZ_CP019574 Location: 1882029..1938999 Organism: Staphylococcus aureus strain USA400-0051 Replicon: chromosome
Accession: NZ_CP019574 Location: 1882029..1938999 Organism: Staphylococcus aureus strain USA400-0051 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAU400_RS09450 () | 1877048..1877794 | - | 747 | WP_016169057.1 | S9 family peptidase | - |
| SAU400_RS09455 () | 1877799..1878272 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| SAU400_RS09460 () | 1878338..1878595 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| SAU400_RS09465 () | 1878592..1879593 | - | 1002 | WP_000778532.1 | o-succinylbenzoate synthase | - |
| SAU400_RS09470 () | 1879598..1881076 | - | 1479 | WP_000348356.1 | o-succinylbenzoate--CoA ligase | - |
| SAU400_RS09475 () | 1881235..1881690 | - | 456 | WP_072419835.1 | DUF4909 domain-containing protein | - |
| SAU400_RS09480 () | 1881993..1882643 | + | 651 | WP_001793444.1 | excalibur calcium-binding domain-containing protein | - |
| SAU400_RS09485 () | 1882724..1883719 | + | 996 | WP_000070649.1 | DUF4352 domain-containing protein | - |
| SAU400_RS09490 () | 1883793..1884419 | + | 627 | WP_000669017.1 | hypothetical protein | - |
| SAU400_RS09495 () | 1884460..1884801 | + | 342 | WP_000627541.1 | DUF3969 family protein | - |
| SAU400_RS09500 () | 1884902..1885474 | + | 573 | WP_000414202.1 | hypothetical protein | - |
| SAU400_RS09505 () | 1885672..1886229 | - | 558 | Protein_1782 | ImmA/IrrE family metallo-endopeptidase | - |
| SAU400_RS09515 () | 1886602..1886778 | - | 177 | WP_000375477.1 | hypothetical protein | - |
| SAU400_RS09520 () | 1886789..1887172 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| SAU400_RS09530 () | 1887776..1887919 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| SAU400_RS14775 () | 1888122..1888217 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1888245..1888304 | - | 60 | - | - | Antitoxin Detail |
| SAU400_RS09540 () | 1888340..1888441 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| SAU400_RS09545 () | 1888419..1888595 | - | 177 | Protein_1788 | transposase | - |
| SAU400_RS09550 () | 1888789..1889166 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| SAU400_RS09555 () | 1889686..1893788 | - | 4103 | Protein_1790 | SMEK domain-containing protein | - |
| SAU400_RS09565 () | 1894638..1895837 | - | 1200 | Protein_1791 | restriction endonuclease subunit S | - |
| SAU400_RS09570 () | 1895830..1897386 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| SAU400_RS09575 () | 1897550..1897684 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| SAU400_RS09580 () | 1897749..1898468 | - | 720 | WP_001038709.1 | Serine protease SplF | VF |
| SAU400_RS09585 () | 1898589..1899308 | - | 720 | WP_001038865.1 | Serine protease SplC | VF |
| SAU400_RS09590 () | 1899366..1900088 | - | 723 | WP_001039444.1 | Serine protease SplB | VF |
| SAU400_RS09595 () | 1900213..1900920 | - | 708 | WP_001005059.1 | Serine protease SplA | VF |
| SAU400_RS09605 () | 1901884..1902450 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| SAU400_RS09610 () | 1902924..1903622 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| SAU400_RS09615 () | 1903619..1904380 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| SAU400_RS09620 () | 1904377..1905069 | - | 693 | WP_001096791.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| SAU400_RS09625 () | 1905092..1906465 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| SAU400_RS09630 () | 1906475..1906993 | - | 519 | WP_000504439.1 | flavoprotein | - |
| SAU400_RS09635 () | 1907009..1908253 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| SAU400_RS09640 () | 1908246..1911238 | - | 2993 | Protein_1805 | lantibiotic dehydratase | - |
| SAU400_RS09645 () | 1911303..1911446 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| SAU400_RS09655 () | 1912182..1912325 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| SAU400_RS09660 () | 1912567..1913550 | - | 984 | WP_000782464.1 | Leucotoxin LukDv | VF |
| SAU400_RS09665 () | 1913552..1914487 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| SAU400_RS09670 () | 1915383..1915838 | + | 456 | WP_001086056.1 | hypothetical protein | - |
| SAU400_RS09675 () | 1915851..1916639 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| SAU400_RS09730 () | 1919095..1919649 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| SAU400_RS09740 () | 1919971..1921371 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| SAU400_RS09745 () | 1921395..1922318 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| SAU400_RS09750 () | 1922376..1923413 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| SAU400_RS09755 () | 1923403..1923513 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| SAU400_RS09760 () | 1923676..1924179 | + | 504 | WP_000737978.1 | signal transduction protein TRAP | - |
| SAU400_RS09765 () | 1924303..1925526 | - | 1224 | WP_000551840.1 | ABC transporter permease | - |
| SAU400_RS09770 () | 1925519..1926259 | - | 741 | WP_000216873.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| SAU400_RS09775 () | 1926393..1926815 | + | 423 | WP_000004981.1 | HIT family protein | - |
| SAU400_RS09780 () | 1926957..1927322 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| SAU400_RS09790 () | 1928054..1928611 | + | 558 | WP_000477957.1 | DUF3267 domain-containing protein | - |
| SAU400_RS09795 () | 1928816..1929778 | + | 963 | WP_000782121.1 | Foldase protein PrsA | VF |
| SAU400_RS09800 () | 1929899..1930840 | - | 942 | WP_001244179.1 | 3'-5' exoribonuclease YhaM | - |
| SAU400_RS09805 () | 1930837..1933773 | - | 2937 | WP_000584628.1 | AAA family ATPase | - |
| SAU400_RS09810 () | 1933763..1934959 | - | 1197 | WP_000238230.1 | exonuclease SbcCD subunit D | - |
| SAU400_RS09815 () | 1935250..1935348 | - | 99 | WP_001802255.1 | hypothetical protein | - |
| SAU400_RS09825 () | 1935840..1936184 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| SAU400_RS09830 () | 1936253..1937377 | - | 1125 | WP_000992521.1 | DUF445 domain-containing protein | - |
| SAU400_RS09835 () | 1937556..1938020 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| SAU400_RS09840 () | 1938376..1938999 | - | 624 | WP_001045133.1 | Transcriptional regulatory protein LiaR | VF |
| SAU400_RS09845 () | 1939021..1940133 | - | 1113 | WP_000437966.1 | GAF domain-containing sensor histidine kinase | - |
| SAU400_RS09850 () | 1940296..1941117 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| SAU400_RS09855 () | 1941577..1942962 | - | 1386 | WP_000116229.1 | class II fumarate hydratase | - |
| SAU400_RS09860 () | 1943158..1943553 | - | 396 | WP_000901023.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|