MGE detailed information
MGE type: Genomic_island MGE length: 84806 bp
Accession: NZ_CP019431 Location: 5384478..5469283 Organism: Pseudomonas sp. S35 Replicon: chromosome
Accession: NZ_CP019431 Location: 5384478..5469283 Organism: Pseudomonas sp. S35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PspS35_RS24175 () | 5379821..5380612 | + | 792 | WP_159937086.1 | GIY-YIG nuclease family protein | - |
| PspS35_RS24180 () | 5380771..5381574 | - | 804 | WP_010466203.1 | IS21-like element helper ATPase IstB | - |
| PspS35_RS24185 () | 5381567..5383066 | - | 1500 | WP_159935364.1 | IS21 family transposase | - |
| PspS35_RS24190 () | 5383279..5384481 | + | 1203 | WP_159937087.1 | DUF1738 domain-containing protein | - |
| PspS35_RS24195 () | 5384478..5384642 | + | 165 | WP_159937088.1 | hypothetical protein | - |
| PspS35_RS24200 () | 5384947..5385924 | + | 978 | WP_159937089.1 | AAA family ATPase | - |
| PspS35_RS24205 () | 5385952..5386410 | + | 459 | WP_097191534.1 | hypothetical protein | - |
| PspS35_RS24210 () | 5386678..5387151 | - | 474 | WP_097191535.1 | hypothetical protein | - |
| PspS35_RS24215 () | 5387767..5388363 | - | 597 | WP_159937090.1 | hypothetical protein | - |
| PspS35_RS24220 () | 5388455..5390791 | - | 2337 | WP_159937091.1 | hypothetical protein | - |
| PspS35_RS24225 () | 5390856..5392361 | - | 1506 | WP_159937092.1 | hypothetical protein | - |
| PspS35_RS24230 () | 5392398..5392859 | - | 462 | WP_159937093.1 | DUF4113 domain-containing protein | - |
| PspS35_RS24235 () | 5392843..5393571 | - | 729 | WP_159937094.1 | hypothetical protein | - |
| PspS35_RS24240 () | 5393564..5394469 | - | 906 | WP_159937095.1 | abortive infection family protein | - |
| PspS35_RS24245 () | 5394481..5394798 | - | 318 | WP_159937096.1 | S24 family peptidase | - |
| PspS35_RS24250 () | 5395353..5396228 | + | 876 | WP_159937097.1 | N-6 DNA methylase | - |
| PspS35_RS24255 () | 5396225..5397076 | + | 852 | WP_159937098.1 | N-6 DNA methylase | - |
| PspS35_RS24260 () | 5397214..5397555 | + | 342 | WP_133244137.1 | hypothetical protein | - |
| PspS35_RS24265 () | 5397870..5398175 | - | 306 | WP_108538154.1 | hypothetical protein | - |
| PspS35_RS24270 () | 5398178..5401306 | - | 3129 | WP_159937099.1 | hypothetical protein | - |
| PspS35_RS24275 () | 5401421..5401999 | - | 579 | WP_159937100.1 | hypothetical protein | - |
| PspS35_RS24280 () | 5402410..5403537 | - | 1128 | WP_159937101.1 | hypothetical protein | - |
| PspS35_RS24285 () | 5403537..5404040 | - | 504 | WP_133244138.1 | hypothetical protein | - |
| PspS35_RS24290 () | 5404652..5405191 | + | 540 | WP_159937102.1 | hypothetical protein | - |
| PspS35_RS24295 () | 5405188..5405625 | + | 438 | WP_108538149.1 | hypothetical protein | - |
| PspS35_RS24300 () | 5405636..5406436 | + | 801 | WP_159937103.1 | hypothetical protein | - |
| PspS35_RS24305 () | 5406433..5408688 | + | 2256 | WP_159937104.1 | hypothetical protein | - |
| PspS35_RS24310 () | 5408724..5411489 | - | 2766 | WP_108538235.1 | AAA family ATPase | - |
| PspS35_RS24315 () | 5411981..5412652 | + | 672 | WP_159937105.1 | hypothetical protein | - |
| PspS35_RS24320 () | 5412707..5414548 | + | 1842 | WP_159937106.1 | hypothetical protein | - |
| PspS35_RS24325 () | 5414643..5415932 | - | 1290 | WP_159937107.1 | hypothetical protein | - |
| PspS35_RS24330 () | 5416199..5416534 | - | 336 | WP_159937108.1 | hypothetical protein | - |
| PspS35_RS24335 () | 5416956..5417834 | - | 879 | WP_159937109.1 | hypothetical protein | - |
| PspS35_RS24340 () | 5418514..5418747 | + | 234 | WP_159937110.1 | hypothetical protein | - |
| PspS35_RS24345 () | 5418988..5419296 | - | 309 | WP_159938114.1 | helix-turn-helix domain-containing protein | - |
| PspS35_RS24350 () | 5419488..5419862 | + | 375 | WP_159937111.1 | hypothetical protein | - |
| PspS35_RS24355 () | 5419859..5420395 | + | 537 | WP_159937112.1 | hypothetical protein | - |
| PspS35_RS24360 () | 5420412..5420969 | + | 558 | WP_159937113.1 | hypothetical protein | - |
| PspS35_RS24365 () | 5421027..5421332 | - | 306 | WP_159937114.1 | hypothetical protein | - |
| PspS35_RS24370 () | 5421415..5421591 | - | 177 | WP_159937115.1 | hypothetical protein | - |
| PspS35_RS24375 () | 5421588..5421860 | - | 273 | WP_159937116.1 | hypothetical protein | - |
| PspS35_RS24380 () | 5421958..5422728 | + | 771 | WP_159937117.1 | hypothetical protein | - |
| PspS35_RS30140 () | 5422762..5423427 | - | 666 | WP_159937118.1 | hypothetical protein | - |
| PspS35_RS24390 () | 5423510..5424259 | + | 750 | WP_133244082.1 | hypothetical protein | - |
| PspS35_RS24395 () | 5424568..5425506 | + | 939 | WP_159937119.1 | hypothetical protein | - |
| PspS35_RS24400 () | 5425503..5426099 | + | 597 | WP_159937120.1 | hypothetical protein | - |
| PspS35_RS24405 () | 5426096..5426818 | - | 723 | WP_159937121.1 | hypothetical protein | - |
| PspS35_RS24410 () | 5426815..5428152 | - | 1338 | WP_159937122.1 | hypothetical protein | - |
| PspS35_RS24415 () | 5428244..5429704 | - | 1461 | WP_159937123.1 | hypothetical protein | - |
| PspS35_RS24420 () | 5429847..5430536 | + | 690 | WP_108538251.1 | hypothetical protein | - |
| PspS35_RS24425 () | 5430606..5431226 | + | 621 | WP_159937124.1 | HEPN domain-containing protein | - |
| PspS35_RS24430 () | 5431228..5432298 | + | 1071 | WP_159937125.1 | hypothetical protein | - |
| PspS35_RS24435 () | 5432366..5432800 | + | 435 | WP_057021762.1 | hypothetical protein | - |
| PspS35_RS24440 () | 5432811..5433332 | + | 522 | WP_159937126.1 | hypothetical protein | - |
| PspS35_RS24445 () | 5433332..5434084 | + | 753 | WP_159937127.1 | hypothetical protein | - |
| PspS35_RS24450 () | 5434140..5434991 | - | 852 | WP_159937128.1 | hypothetical protein | - |
| PspS35_RS24455 () | 5435087..5435395 | + | 309 | WP_056788882.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PspS35_RS24460 () | 5435392..5435673 | + | 282 | WP_159937129.1 | putative addiction module antidote protein | Antitoxin Detail |
| PspS35_RS24465 () | 5435757..5436542 | - | 786 | WP_159937130.1 | hypothetical protein | - |
| PspS35_RS24470 () | 5436599..5436919 | - | 321 | WP_159937131.1 | hypothetical protein | - |
| PspS35_RS24475 () | 5437006..5437569 | - | 564 | WP_159937132.1 | hypothetical protein | - |
| PspS35_RS24480 () | 5437641..5438333 | - | 693 | WP_159937133.1 | SOS response-associated peptidase | - |
| PspS35_RS24485 () | 5438350..5438592 | - | 243 | WP_159937134.1 | hypothetical protein | - |
| PspS35_RS24490 () | 5439126..5439473 | - | 348 | WP_202982138.1 | DNA binding protein | - |
| PspS35_RS24495 () | 5439699..5441015 | - | 1317 | WP_159937135.1 | hypothetical protein | VF |
| PspS35_RS24500 () | 5441179..5442807 | - | 1629 | WP_159937136.1 | hypothetical protein | VF |
| PspS35_RS24505 () | 5442863..5443011 | + | 149 | Protein_4830 | efflux transporter periplasmic adaptor subunit | - |
| PspS35_RS24510 () | 5443511..5444668 | - | 1158 | WP_159937137.1 | GGDEF domain-containing protein | - |
| PspS35_RS24515 () | 5444730..5445344 | - | 615 | WP_159937138.1 | outer membrane beta-barrel protein | - |
| PspS35_RS24520 () | 5445795..5446250 | + | 456 | WP_159937139.1 | hypothetical protein | - |
| PspS35_RS24525 () | 5446830..5447804 | + | 975 | WP_159937140.1 | helix-turn-helix transcriptional regulator | - |
| PspS35_RS24530 () | 5448348..5450909 | + | 2562 | WP_159937141.1 | DNA ligase D | - |
| PspS35_RS24535 () | 5450918..5451142 | + | 225 | WP_159937142.1 | DUF2188 domain-containing protein | - |
| PspS35_RS24540 () | 5451657..5452661 | - | 1005 | WP_159937143.1 | DNA adenine methylase | - |
| PspS35_RS24545 () | 5452805..5453371 | - | 567 | WP_159937144.1 | hypothetical protein | - |
| PspS35_RS24550 () | 5453987..5456656 | + | 2670 | WP_159937145.1 | hypothetical protein | - |
| PspS35_RS24555 () | 5456884..5459286 | + | 2403 | WP_159938115.1 | hypothetical protein | - |
| PspS35_RS24560 () | 5460206..5460808 | + | 603 | WP_159937146.1 | hypothetical protein | - |
| PspS35_RS24565 () | 5460833..5461120 | + | 288 | WP_159937147.1 | hypothetical protein | - |
| PspS35_RS24570 () | 5461289..5461540 | + | 252 | WP_159937148.1 | hypothetical protein | - |
| PspS35_RS24575 () | 5461537..5461935 | - | 399 | WP_159937149.1 | hypothetical protein | - |
| PspS35_RS24580 () | 5462221..5462484 | + | 264 | WP_159937150.1 | hypothetical protein | - |
| PspS35_RS24585 () | 5462593..5464494 | + | 1902 | WP_159937151.1 | hypothetical protein | - |
| PspS35_RS24590 () | 5464669..5465316 | + | 648 | WP_159937152.1 | hypothetical protein | - |
| PspS35_RS24595 () | 5465385..5466278 | - | 894 | WP_159937153.1 | hypothetical protein | - |
| PspS35_RS24600 () | 5466325..5466816 | - | 492 | WP_159937154.1 | hypothetical protein | - |
| PspS35_RS24605 () | 5466874..5467185 | - | 312 | WP_159937155.1 | hypothetical protein | - |
| PspS35_RS24610 () | 5467745..5469283 | - | 1539 | WP_159937156.1 | hypothetical protein ; Integrase | Integrase |
| PspS35_RS24615 () | 5469635..5470096 | + | 462 | Protein_4852 | integrase arm-type DNA-binding domain-containing protein | - |
| PspS35_RS24620 () | 5470159..5470587 | - | 429 | WP_159937157.1 | hypothetical protein | - |
| PspS35_RS24625 () | 5470842..5471957 | - | 1116 | WP_017530054.1 | two-component system response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|