MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP019361 Location: 4263122..4272473 Organism: Escherichia coli strain XH993 Replicon: chromosome
Accession: NZ_CP019361 Location: 4263122..4272473 Organism: Escherichia coli strain XH993 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BW158_RS22610 () | 4258283..4259584 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| BW158_RS22615 () | 4259700..4260038 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| BW158_RS22620 () | 4260014..4261711 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| BW158_RS22625 () | 4261748..4262323 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| BW158_RS22635 () | 4263122..4264660 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| BW158_RS22640 () | 4265026..4266360 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| BW158_RS22645 () | 4266440..4268587 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| BW158_RS22650 () | 4268646..4270103 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| BW158_RS22655 () | 4270340..4271857 | + | 1518 | WP_001295090.1 | lysine--tRNA ligase | - |
| BW158_RS22660 () | 4271976..4272149 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| BW158_RS22665 () | 4272177..4272473 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| BW158_RS22670 () | 4272700..4272972 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| BW158_RS22675 () | 4272984..4273214 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| BW158_RS22680 () | 4273395..4275026 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| BW158_RS22685 () | 4275023..4275742 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |