MGE detailed information
MGE type: Prophage MGE length: 68350 bp
Accession: NZ_CP019361 Location: 2267418..2335767 Organism: Escherichia coli strain XH993 Replicon: chromosome
Accession: NZ_CP019361 Location: 2267418..2335767 Organism: Escherichia coli strain XH993 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BW158_RS12815 () | 2263257..2264789 | + | 1533 | WP_001353838.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha | - |
| BW158_RS12820 () | 2264800..2266188 | + | 1389 | WP_000014036.1 | Re/Si-specific NAD(P)(+) transhydrogenase subunit beta | - |
| BW158_RS12825 () | 2266213..2267169 | - | 957 | Protein_2141 | AI-2 transporter TqsA | - |
| BW158_RS12830 () | 2267224..2267921 | + | 698 | Protein_2142 | IS1 family transposase IS1X2 | Transposase |
| BW158_RS12835 () | 2268436..2268801 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| BW158_RS12840 () | 2268788..2269117 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| BW158_RS12845 () | 2269156..2269977 | - | 822 | WP_001260835.1 | serine protease | - |
| BW158_RS12850 () | 2270077..2270160 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| BW158_RS12855 () | 2270253..2270588 | - | 336 | WP_000743942.1 | acid resistance repetitive basic protein Asr | - |
| BW158_RS12860 () | 2270850..2271547 | - | 698 | Protein_2148 | IS1 family transposase IS1X2 | Transposase |
| BW158_RS12865 () | 2271762..2273015 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| BW158_RS12870 () | 2273122..2274015 | + | 894 | WP_001019525.1 | Hca operon transcriptional activator HcaR | VF |
| BW158_RS12875 () | 2274150..2275370 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| BW158_RS12880 () | 2275495..2276190 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| BW158_RS12885 () | 2276143..2277435 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| BW158_RS12890 () | 2277594..2278208 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| BW158_RS12895 () | 2278251..2279105 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| BW158_RS12900 () | 2279107..2279724 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| BW158_RS12905 () | 2279735..2282158 | - | 2424 | WP_097742662.1 | dimethyl sulfoxide reductase subunit A | - |
| BW158_RS12910 () | 2282219..2284645 | - | 2427 | WP_000041695.1 | dimethyl sulfoxide reductase subunit A | - |
| BW158_RS12915 () | 2284844..2285149 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| BW158_RS12920 () | 2285257..2285967 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| BW158_RS12925 () | 2285970..2286530 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| BW158_RS12930 () | 2286565..2286906 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| BW158_RS12935 () | 2287041..2287367 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| BW158_RS12940 () | 2287573..2288787 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| BW158_RS12945 () | 2288799..2289818 | + | 1020 | WP_000836067.1 | Zn-dependent oxidoreductase | - |
| BW158_RS12950 () | 2289876..2289986 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| BW158_RS12955 () | 2290006..2291286 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| BW158_RS12960 () | 2291321..2291571 | - | 251 | Protein_2168 | excisionase family protein | - |
| BW158_RS12965 () | 2291644..2292705 | - | 1062 | WP_113403961.1 | exonuclease | - |
| BW158_RS12970 () | 2292799..2292990 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| BW158_RS12975 () | 2292987..2293175 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| BW158_RS12980 () | 2293662..2294237 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| BW158_RS12985 () | 2294239..2294394 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| BW158_RS12990 () | 2294561..2294968 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| BW158_RS12995 () | 2295049..2295276 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| BW158_RS13000 () | 2295260..2295781 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| BW158_RS13005 () | 2295762..2296727 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| BW158_RS13010 () | 2296768..2297166 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| BW158_RS13015 () | 2297369..2298034 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| BW158_RS13020 () | 2298243..2298857 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| BW158_RS13025 () | 2298854..2299882 | + | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| BW158_RS13030 () | 2300267..2301636 | + | 1370 | WP_168728556.1 | IS3 family transposase IS150 | Transposase |
| BW158_RS13035 () | 2301812..2303125 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| BW158_RS13040 () | 2303562..2303894 | - | 333 | WP_001301033.1 | protein FlxA | - |
| BW158_RS13045 () | 2304097..2304402 | - | 306 | WP_071598992.1 | hypothetical protein | - |
| BW158_RS13050 () | 2304427..2304666 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| BW158_RS13055 () | 2304666..2304953 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| BW158_RS13060 () | 2305025..2305180 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| BW158_RS13065 () | 2305397..2305648 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| BW158_RS13070 () | 2305874..2306035 | + | 162 | Protein_2190 | antitermination protein | - |
| BW158_RS13075 () | 2306313..2306402 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| BW158_RS13080 () | 2306457..2306669 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| BW158_RS13085 () | 2306970..2307185 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| BW158_RS13090 () | 2307939..2308154 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| BW158_RS13095 () | 2308159..2308470 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| BW158_RS13100 () | 2308467..2309000 | + | 534 | WP_001092971.1 | lysozyme | - |
| BW158_RS13105 () | 2308997..2309494 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| BW158_RS13110 () | 2309857..2310069 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| BW158_RS13115 () | 2310080..2310268 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| BW158_RS13120 () | 2310271..2310336 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| BW158_RS13125 () | 2310416..2310571 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| BW158_RS13130 () | 2310743..2310916 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| BW158_RS13135 () | 2311068..2311478 | - | 411 | WP_001571459.1 | DUF1398 domain-containing protein | - |
| BW158_RS13140 () | 2311536..2311769 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| BW158_RS13145 () | 2312158..2312454 | + | 297 | WP_113403960.1 | terminase small subunit | - |
| BW158_RS13150 () | 2312665..2313690 | + | 1026 | WP_000118192.1 | major capsid protein | - |
| BW158_RS13155 () | 2313732..2314127 | + | 396 | WP_113403959.1 | DNA-packaging protein FI | - |
| BW158_RS13160 () | 2314139..2314492 | + | 354 | WP_000752966.1 | head-tail joining protein | - |
| BW158_RS13165 () | 2314504..2315087 | + | 584 | Protein_2209 | Outer membrane protein X | VF |
| BW158_RS13170 () | 2315152..2317551 | + | 2400 | WP_168728557.1 | prophage tail fiber N-terminal domain-containing protein | - |
| BW158_RS13175 () | 2317548..2317829 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| BW158_RS13180 () | 2317839..2318543 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| BW158_RS13185 () | 2318554..2318847 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| BW158_RS13190 () | 2318867..2318977 | + | 111 | Protein_2214 | tail fiber assembly protein | - |
| BW158_RS13195 () | 2319075..2319665 | - | 591 | WP_000086519.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| BW158_RS13200 () | 2319982..2320215 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| BW158_RS13205 () | 2320284..2320397 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| BW158_RS13210 () | 2321001..2322284 | + | 1284 | Protein_2218 | MHS family MFS transporter YdfJ | - |
| BW158_RS13215 () | 2322373..2323833 | + | 1461 | WP_113404048.1 | mannitol dehydrogenase family protein | - |
| BW158_RS13220 () | 2323869..2324072 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| BW158_RS13225 () | 2324249..2324935 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| BW158_RS13230 () | 2325024..2325770 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| BW158_RS13235 () | 2325907..2327952 | + | 2046 | WP_001300598.1 | peptidyl-dipeptidase Dcp | - |
| BW158_RS13240 () | 2327996..2328514 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| BW158_RS13245 () | 2328790..2329182 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| BW158_RS13250 () | 2329437..2330327 | + | 891 | WP_113404047.1 | diguanylate cyclase DgcZ | - |
| BW158_RS13255 () | 2330546..2330641 | - | 96 | WP_000901367.1 | protein MgtS | - |
| BW158_RS13260 () | 2330768..2331955 | - | 1188 | WP_001054175.1 | efflux MFS transporter YdeE | - |
| BW158_RS13265 () | 2332150..2333049 | + | 900 | WP_000087210.1 | O-acetylserine/cysteine exporter | - |
| BW158_RS13270 () | 2333080..2333298 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| BW158_RS13275 () | 2333330..2333713 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| BW158_RS13280 () | 2333733..2334167 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| BW158_RS13285 () | 2334387..2334707 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BW158_RS13290 () | 2334697..2334981 | + | 285 | WP_000268704.1 | helix-turn-helix domain-containing protein | - |
| BW158_RS13295 () | 2335102..2335767 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| BW158_RS13300 () | 2335792..2336982 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| BW158_RS13305 () | 2337132..2338055 | - | 924 | WP_113404046.1 | putative protein YneK | - |
| BW158_RS13310 () | 2338133..2339014 | - | 882 | WP_000366501.1 | LysR family transcriptional regulator | - |
| BW158_RS13315 () | 2339115..2340503 | + | 1389 | WP_001301028.1 | succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|