MGE detailed information
MGE type: Mobilizable plasmid MGE length: 86028 bp
Accession: NZ_CP019358 Location: 1..86028 Organism: Escherichia coli strain XH990 Replicon: plasmid pXH990_3
Accession: NZ_CP019358 Location: 1..86028 Organism: Escherichia coli strain XH990 Replicon: plasmid pXH990_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BW242_RS01875 () | 1904..2236 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| BW242_RS01880 () | 2470..2805 | + | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| BW242_RS01885 () | 2891..3739 | - | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| BW242_RS01890 () | 4088..4285 | + | 198 | WP_001161106.1 | hypothetical protein | - |
| BW242_RS01895 () | 4319..4570 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| BW242_RS01900 () | 4601..4807 | - | 207 | WP_000150314.1 | hypothetical protein | VF |
| BW242_RS01905 () | 4869..5771 | - | 903 | WP_023150544.1 | Recombination-promoting nuclease RpnA | VF |
| BW242_RS01910 () | 5768..6157 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| BW242_RS01915 () | 6334..6600 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| BW242_RS01920 () | 6694..7128 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| BW242_RS01925 () | 7857..8357 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| BW242_RS01930 () | 8819..9415 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| BW242_RS01935 () | 9412..10131 | - | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| BW242_RS01940 () | 10128..10562 | - | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| BW242_RS01945 () | 10615..12573 | - | 1959 | WP_063267868.1 | ParB/RepB/Spo0J family partition protein | - |
| BW242_RS01950 () | 12632..12865 | - | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| BW242_RS01955 () | 12923..13450 | - | 528 | WP_012783926.1 | single-stranded DNA-binding protein | - |
| BW242_RS01960 () | 13834..14097 | - | 264 | WP_158213465.1 | hypothetical protein | - |
| BW242_RS01965 () | 14235..14426 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| BW242_RS01970 () | 14423..14845 | - | 423 | WP_000271703.1 | DUF1380 family protein | - |
| BW242_RS01975 () | 14892..15194 | - | 303 | WP_014653258.1 | antirestriction protein | - |
| BW242_RS01980 () | 15730..16500 | - | 771 | WP_012783922.1 | hypothetical protein | - |
| BW242_RS01985 () | 16545..16979 | - | 435 | Protein_23 | DUF1380 domain-containing protein | - |
| BW242_RS01990 () | 16993..17214 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| BW242_RS01995 () | 17215..17898 | - | 684 | WP_000086127.1 | DNA methylase | - |
| BW242_RS02000 () | 17974..18285 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| BW242_RS02005 () | 18289..18711 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| BW242_RS02010 () | 18714..19694 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| BW242_RS02015 () | 20032..20367 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| BW242_RS02020 () | 20462..21364 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| BW242_RS02025 () | 21782..22030 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| BW242_RS02030 () | 22027..22464 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BW242_RS02035 () | 22464..23735 | + | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| BW242_RS02040 () | 23923..24549 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| BW242_RS02045 () | 24546..24848 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| BW242_RS02050 () | 25371..26765 | - | 1395 | WP_023150520.1 | hypothetical protein | - |
| BW242_RS02055 () | 26720..27052 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| BW242_RS02060 () | 27099..27974 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| BW242_RS02065 () | 28230..29492 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| BW242_RS02070 () | 30047..30649 | + | 603 | WP_001703912.1 | hypothetical protein | - |
| BW242_RS02075 () | 30705..31214 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| BW242_RS02080 () | 31447..31587 | - | 141 | WP_032072206.1 | hypothetical protein | - |
| BW242_RS02085 () | 32284..33315 | - | 1032 | WP_024176529.1 | replication initiation protein | - |
| BW242_RS02090 () | 34288..34551 | + | 264 | WP_001749178.1 | ash family protein | - |
| BW242_RS02095 () | 34469..34756 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| BW242_RS02100 () | 35198..35731 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| BW242_RS02105 () | 35985..36668 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| BW242_RS02110 () | 36841..37392 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| BW242_RS02115 () | 37554..37808 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| BW242_RS02120 () | 37975..38271 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| BW242_RS02125 () | 38895..39962 | + | 1068 | WP_012783947.1 | hypothetical protein | VF |
| BW242_RS02130 () | 39962..40399 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| BW242_RS02135 () | 40413..42095 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| BW242_RS02140 () | 42088..43383 | + | 1296 | WP_012783946.1 | type 4b pilus protein PilO2 | - |
| BW242_RS02145 () | 43370..43822 | + | 453 | WP_012783945.1 | hypothetical protein | VF |
| BW242_RS02150 () | 43833..45386 | + | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| BW242_RS02155 () | 45399..46496 | + | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| BW242_RS02160 () | 46514..47128 | + | 615 | WP_001542527.1 | hypothetical protein | VF |
| BW242_RS02165 () | 47138..47698 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| BW242_RS02170 () | 47683..48339 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| BW242_RS02175 () | 48339..49633 | + | 1295 | Protein_61 | hypothetical protein | VF |
| BW242_RS02180 () | 49630..49877 | - | 248 | Protein_62 | hypothetical protein | - |
| BW242_RS02185 () | 50733..51887 | + | 1155 | WP_001139955.1 | integrase | - |
| BW242_RS02190 () | 52038..52862 | + | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| BW242_RS02195 () | 52948..54150 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| BW242_RS02200 () | 54210..54794 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| BW242_RS02205 () | 55188..55646 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| BW242_RS02210 () | 55643..56461 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| BW242_RS02215 () | 56458..57606 | + | 1149 | WP_001024971.1 | putative protein YggR | VF |
| BW242_RS02220 () | 57603..57893 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| BW242_RS02225 () | 57908..58459 | + | 552 | WP_012783942.1 | Phospholipase D | VF |
| BW242_RS02230 () | 58549..62316 | + | 3768 | WP_012783940.1 | SogL protein | - |
| BW242_RS02235 () | 62334..62681 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| BW242_RS02240 () | 62678..63370 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| BW242_RS02245 () | 63381..64364 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| BW242_RS02250 () | 64367..65656 | + | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| BW242_RS02255 () | 65656..66360 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| BW242_RS02260 () | 66360..66887 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| BW242_RS02265 () | 66938..67342 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| BW242_RS02270 () | 67406..67594 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| BW242_RS02275 () | 67578..68378 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| BW242_RS02280 () | 68468..71512 | + | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| BW242_RS02285 () | 71512..72126 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| BW242_RS02290 () | 72093..73295 | + | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| BW242_RS02295 () | 73324..73908 | + | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| BW242_RS02300 () | 74005..76173 | + | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| BW242_RS02305 () | 76244..76906 | + | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| BW242_RS02310 () | 76978..77187 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| BW242_RS02315 () | 77579..77755 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| BW242_RS02320 () | 77820..78116 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| BW242_RS02325 () | 78416..78667 | + | 252 | Protein_91 | hypothetical protein | - |
| BW242_RS02330 () | 78739..78891 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 78943..79003 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 78943..79003 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 78943..79003 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 78943..79003 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| BW242_RS02335 () | 79206..80297 | + | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 80367..80424 | + | 58 | NuclAT_1 | - | - |
| - () | 80367..80424 | + | 58 | NuclAT_1 | - | - |
| - () | 80367..80424 | + | 58 | NuclAT_1 | - | - |
| - () | 80367..80424 | + | 58 | NuclAT_1 | - | - |
| BW242_RS02340 () | 80604..81812 | + | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| BW242_RS02345 () | 81831..82901 | + | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| BW242_RS02350 () | 82894..85185 | + | 2292 | WP_202036551.1 | conjugal transfer protein TrbC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|