MGE detailed information
MGE type: Prophage MGE length: 87078 bp
Accession: NZ_CP019243 Location: 639337..726414 Organism: Escherichia coli strain Combat2C1 Replicon: chromosome
Accession: NZ_CP019243 Location: 639337..726414 Organism: Escherichia coli strain Combat2C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI82_RS03460 () | 634777..636150 | + | 1374 | WP_001127222.1 | MFS transporter | - |
| BWI82_RS03465 () | 636196..637077 | - | 882 | WP_000984517.1 | protease HtpX | - |
| BWI82_RS03470 () | 637269..639317 | - | 2049 | WP_001055794.1 | carboxy terminal-processing peptidase | - |
| BWI82_RS03475 () | 639337..640035 | - | 699 | WP_000431376.1 | RNA chaperone ProQ | - |
| BWI82_RS03480 () | 640132..640629 | - | 498 | WP_001029106.1 | L-methionine (R)-S-oxide reductase | - |
| BWI82_RS03485 () | 640759..642042 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| BWI82_RS03490 () | 642011..644644 | + | 2634 | WP_001298452.1 | hypothetical protein | VF |
| BWI82_RS03495 () | 644724..646163 | + | 1440 | WP_001298454.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| BWI82_RS03500 () | 646281..646517 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| BWI82_RS03505 () | 646622..646813 | + | 192 | WP_001296140.1 | YebW family protein | - |
| BWI82_RS03510 () | 646814..647470 | - | 657 | WP_000812743.1 | protein-serine/threonine phosphatase | - |
| - () | 647567..647835 | + | 269 | - | - | Antitoxin Detail |
| - () | 647605..647707 | - | 103 | - | - | Toxin Detail |
| BWI82_RS03515 () | 647865..648206 | - | 342 | WP_000984819.1 | YebY family protein | - |
| BWI82_RS03520 () | 648219..649091 | - | 873 | WP_000879311.1 | copper homeostasis membrane protein CopD | - |
| BWI82_RS03525 () | 649095..649469 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| BWI82_RS03530 () | 649608..649838 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| BWI82_RS03535 () | 649941..650597 | + | 657 | WP_000011644.1 | carbon-nitrogen hydrolase family protein | - |
| BWI82_RS03540 () | 650621..651283 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| BWI82_RS03545 () | 651280..653340 | - | 2061 | WP_148116699.1 | oligopeptidase B | - |
| BWI82_RS03550 () | 653549..654208 | - | 660 | WP_000024728.1 | tellurite resistance TerB family protein | - |
| BWI82_RS03555 () | 654535..654891 | - | 357 | WP_001295500.1 | protein YebF | - |
| BWI82_RS03560 () | 654958..655248 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| BWI82_RS03565 () | 655382..656560 | + | 1179 | WP_000173462.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| BWI82_RS03570 () | 656616..657257 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| BWI82_RS03575 () | 657294..659105 | - | 1812 | WP_001069461.1 | phosphogluconate dehydratase | - |
| BWI82_RS03580 () | 659340..660815 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| BWI82_RS03585 () | 661153..662022 | + | 870 | WP_001056695.1 | DNA-binding transcriptional regulator HexR | - |
| BWI82_RS03590 () | 662150..663592 | + | 1443 | WP_000091149.1 | pyruvate kinase | - |
| BWI82_RS03595 () | 663724..664695 | - | 972 | WP_001296141.1 | Lipid A biosynthesis myristoyltransferase | VF |
| BWI82_RS03600 () | 664814..666136 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| BWI82_RS03605 () | 666152..667084 | - | 933 | WP_001339711.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| BWI82_RS03610 () | 667163..667918 | + | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| BWI82_RS03615 () | 667915..668700 | + | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| BWI82_RS03620 () | 668848..669858 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| BWI82_RS03625 () | 669867..670479 | - | 613 | Protein_670 | Holliday junction branch migration protein RuvA | - |
| BWI82_RS03630 () | 670618..670683 | - | 66 | WP_072123646.1 | stress response small protein YobI | - |
| BWI82_RS03635 () | 670757..671359 | + | 603 | WP_001024942.1 | YebB family permuted papain-like enzyme | - |
| BWI82_RS03640 () | 671361..671882 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| BWI82_RS03645 () | 671917..672657 | - | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| BWI82_RS03650 () | 672686..673138 | - | 453 | WP_077393227.1 | dihydroneopterin triphosphate diphosphatase | - |
| BWI82_RS03655 () | 673131..674903 | - | 1773 | WP_001258675.1 | aspartate--tRNA ligase | - |
| BWI82_RS03660 () | 675213..675779 | + | 567 | WP_000891601.1 | hydrolase | - |
| BWI82_RS03665 () | 676134..676382 | + | 249 | WP_001552994.1 | DinI-like family protein | - |
| BWI82_RS03670 () | 677197..677634 | + | 438 | WP_001617633.1 | acetyltransferase | - |
| BWI82_RS03675 () | 677659..678243 | - | 585 | WP_001552996.1 | XRE family transcriptional regulator | - |
| BWI82_RS03685 () | 678741..679694 | + | 954 | WP_021519057.1 | Protease 7 | VF |
| BWI82_RS03690 () | 679881..681365 | + | 1485 | WP_001226375.1 | alpha/beta hydrolase | - |
| BWI82_RS03695 () | 681624..681854 | - | 231 | Protein_683 | tail fiber assembly protein | - |
| BWI82_RS03700 () | 681911..682579 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| BWI82_RS03710 () | 682634..682732 | - | 99 | WP_071586406.1 | tail fiber assembly protein | - |
| BWI82_RS03715 () | 682772..683065 | - | 294 | WP_042039419.1 | hypothetical protein | - |
| BWI82_RS03720 () | 683078..683356 | - | 279 | WP_000654167.1 | hypothetical protein | - |
| BWI82_RS03725 () | 683353..685413 | - | 2061 | WP_000290543.1 | prophage tail fiber N-terminal domain-containing protein | - |
| BWI82_RS03730 () | 685472..688954 | - | 3483 | WP_000515327.1 | host specificity protein J | - |
| BWI82_RS03735 () | 689015..689647 | - | 633 | WP_000090917.1 | tail assembly protein | - |
| BWI82_RS03740 () | 689584..690327 | - | 744 | WP_000140699.1 | C40 family peptidase | - |
| BWI82_RS03745 () | 690333..691031 | - | 699 | WP_001152660.1 | phage minor tail protein L | - |
| BWI82_RS03750 () | 691031..691360 | - | 330 | WP_000847405.1 | phage tail protein | - |
| BWI82_RS03755 () | 691357..693918 | - | 2562 | WP_000840269.1 | phage tail tape measure protein | - |
| BWI82_RS03760 () | 693911..694345 | - | 435 | WP_000459474.1 | phage tail assembly protein T | - |
| BWI82_RS03765 () | 694327..694749 | - | 423 | WP_000479129.1 | phage minor tail protein G | - |
| BWI82_RS03770 () | 694765..695505 | - | 741 | WP_001351266.1 | phage tail protein | - |
| BWI82_RS03775 () | 695513..695908 | - | 396 | WP_000683101.1 | phage minor tail U family protein | - |
| BWI82_RS03780 () | 695905..696483 | - | 579 | WP_000975062.1 | phage tail protein | - |
| BWI82_RS03785 () | 696495..696848 | - | 354 | WP_001204540.1 | tail attachment protein | - |
| BWI82_RS03790 () | 696841..697215 | - | 375 | WP_000201530.1 | hypothetical protein | - |
| BWI82_RS03795 () | 697267..698295 | - | 1029 | WP_000522648.1 | minor capsid protein E | - |
| BWI82_RS03800 () | 698353..698700 | - | 348 | WP_000256840.1 | head decoration protein | - |
| BWI82_RS03805 () | 698737..700242 | - | 1506 | WP_001253914.1 | S49 family peptidase | - |
| BWI82_RS03810 () | 700232..701824 | - | 1593 | WP_000831761.1 | phage portal protein | - |
| BWI82_RS03815 () | 701821..702027 | - | 207 | WP_000258997.1 | phage head-stabilizing protein | - |
| BWI82_RS03820 () | 702011..703939 | - | 1929 | WP_001304453.1 | phage terminase large subunit family protein | - |
| BWI82_RS03825 () | 703911..704459 | - | 549 | WP_000867568.1 | terminase small subunit | - |
| BWI82_RS03830 () | 704854..705039 | + | 186 | WP_001329960.1 | YlcI/YnfO family protein | - |
| BWI82_RS03835 () | 705172..705312 | - | 141 | WP_000347013.1 | hypothetical protein | - |
| BWI82_RS03845 () | 705669..705893 | - | 225 | WP_000736383.1 | hypothetical protein | - |
| BWI82_RS27665 () | 705890..705982 | - | 93 | WP_033557025.1 | endopeptidase | - |
| BWI82_RS27410 () | 705979..706164 | - | 186 | WP_071702523.1 | Rz1 family lipoprotein | - |
| BWI82_RS03855 () | 706400..706777 | - | 378 | WP_001553012.1 | M15 family metallopeptidase | - |
| BWI82_RS03860 () | 706780..707055 | - | 276 | WP_001553013.1 | phage holin family protein | - |
| BWI82_RS03865 () | 707045..707437 | - | 393 | WP_001553014.1 | hypothetical protein | - |
| BWI82_RS03870 () | 707496..707921 | - | 426 | WP_001553015.1 | hypothetical protein | - |
| BWI82_RS03875 () | 708054..708782 | - | 729 | WP_001553016.1 | Pertussis toxin subunit 1 | VF |
| BWI82_RS03885 () | 709013..709360 | - | 348 | WP_001553017.1 | hypothetical protein | - |
| BWI82_RS03890 () | 709360..710217 | - | 858 | WP_001553018.1 | hypothetical protein | - |
| BWI82_RS03895 () | 710217..711185 | - | 969 | WP_000844628.1 | toprim domain-containing protein | - |
| BWI82_RS03900 () | 711187..712845 | - | 1659 | WP_001553020.1 | DEAD/DEAH box helicase | - |
| BWI82_RS03905 () | 712957..713331 | - | 375 | WP_001617649.1 | hypothetical protein | - |
| BWI82_RS03920 () | 714199..714855 | + | 657 | WP_000838346.1 | helix-turn-helix domain-containing protein | - |
| BWI82_RS03925 () | 714952..715368 | + | 417 | WP_001617650.1 | helix-turn-helix transcriptional regulator | - |
| BWI82_RS03930 () | 715370..715561 | + | 192 | WP_000781553.1 | hypothetical protein | - |
| BWI82_RS03935 () | 715558..715749 | + | 192 | WP_000632554.1 | hypothetical protein | - |
| BWI82_RS03940 () | 715934..716293 | + | 360 | WP_000148631.1 | hypothetical protein | - |
| BWI82_RS03945 () | 716293..716508 | + | 216 | WP_000002323.1 | hypothetical protein | - |
| BWI82_RS03955 () | 716695..717087 | + | 393 | WP_000566776.1 | hypothetical protein | - |
| BWI82_RS03965 () | 717333..718160 | + | 828 | WP_001553029.1 | serine protease | - |
| BWI82_RS03970 () | 718204..718953 | + | 750 | WP_001553031.1 | ORF6N domain-containing protein | - |
| BWI82_RS03975 () | 718950..719519 | + | 570 | WP_001553032.1 | hypothetical protein | - |
| BWI82_RS03980 () | 719516..719749 | + | 234 | WP_000687969.1 | hypothetical protein | - |
| BWI82_RS03985 () | 719736..720101 | + | 366 | WP_000014163.1 | ead/Ea22-like family protein | - |
| BWI82_RS03995 () | 720328..720705 | + | 378 | WP_001553033.1 | DUF551 domain-containing protein | - |
| BWI82_RS04000 () | 720790..721032 | + | 243 | WP_000457737.1 | DUF4222 domain-containing protein | - |
| BWI82_RS04005 () | 721036..721182 | + | 147 | WP_001553034.1 | hypothetical protein | - |
| BWI82_RS04010 () | 721191..721427 | + | 237 | WP_000528718.1 | excisionase family protein | - |
| BWI82_RS04015 () | 721483..722796 | + | 1314 | WP_001617651.1 | Putative defective protein IntQ ; Integrase | Integrase |
| BWI82_RS04020 () | 722778..723548 | + | 771 | WP_042094326.1 | DUF72 domain-containing protein | - |
| BWI82_RS04025 () | 723601..723996 | + | 396 | WP_000252980.1 | MAPEG family protein | - |
| BWI82_RS04030 () | 724037..724780 | + | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| BWI82_RS04035 () | 724777..725748 | + | 972 | WP_000564738.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| BWI82_RS04045 () | 727349..729778 | - | 2430 | WP_000176875.1 | trimethylamine N-oxide reductase TorZ | - |
| BWI82_RS04050 () | 729803..730903 | - | 1101 | WP_001214271.1 | NapC/NirT family cytochrome c | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|