MGE detailed information
MGE type: Mobilizable plasmid MGE length: 73992 bp
Accession: NZ_CP019074 Location: 1..73992 Organism: Escherichia coli strain CRE1493 Replicon: plasmid p1493-3
Accession: NZ_CP019074 Location: 1..73992 Organism: Escherichia coli strain CRE1493 Replicon: plasmid p1493-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVL38_RS25595 () | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| BVL38_RS25600 () | 1257..1997 | - | 741 | WP_063090490.1 | IS91 family transposase ISMno23 | Transposase |
| BVL38_RS25615 () | 2582..3279 | - | 698 | Protein_2 | IS1 family transposase | - |
| BVL38_RS25625 () | 3330..3962 | - | 633 | WP_101973396.1 | IS6 family transposase IS15DI | Transposase |
| BVL38_RS25635 () | 4229..5665 | + | 1437 | WP_000105383.1 | glutathione synthase | - |
| BVL38_RS25640 () | 6083..7087 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| BVL38_RS27845 () | 7286..7570 | - | 285 | WP_058672119.1 | Tn3 family transposase | - |
| BVL38_RS28080 () | 7827..7967 | + | 141 | WP_160784086.1 | hypothetical protein | - |
| BVL38_RS25660 () | 8040..8309 | + | 270 | WP_000079938.1 | hypothetical protein | Antitoxin Detail |
| BVL38_RS25665 () | 8306..8587 | + | 282 | WP_050858704.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BVL38_RS27850 () | 8640..8777 | + | 138 | WP_152931508.1 | hypothetical protein | - |
| BVL38_RS25675 () | 9115..9372 | - | 258 | WP_063072981.1 | biofilm development YmgB/AriR family protein | - |
| BVL38_RS25680 () | 9712..9816 | - | 105 | Protein_12 | integrase core domain-containing protein | - |
| BVL38_RS25685 () | 10011..10436 | - | 426 | WP_063072980.1 | ester cyclase | - |
| BVL38_RS25690 () | 10445..11434 | - | 990 | WP_001541953.1 | HTH-type transcriptional regulator CdhR | VF |
| BVL38_RS25695 () | 11450..12226 | - | 777 | WP_022631027.1 | MBL fold metallo-hydrolase | - |
| BVL38_RS25700 () | 12602..13299 | - | 698 | Protein_16 | IS1 family transposase | - |
| BVL38_RS28305 () | 13386..13454 | - | 69 | WP_211180522.1 | protein YkiE | - |
| BVL38_RS25710 () | 13591..13743 | + | 153 | Protein_18 | RNA polymerase sigma factor FecI | - |
| BVL38_RS25715 () | 13795..14499 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BVL38_RS25720 () | 14553..15239 | - | 687 | Protein_20 | IS4 family transposase IS10R | Transposase |
| BVL38_RS25725 () | 15349..16311 | - | 963 | Protein_21 | IS4 family transposase IS10R | Transposase |
| BVL38_RS25730 () | 16454..17314 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| BVL38_RS25735 () | 17327..17869 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| BVL38_RS25740 () | 18351..18542 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| BVL38_RS25745 () | 18566..18793 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| BVL38_RS25750 () | 18844..19233 | + | 390 | Protein_26 | hypothetical protein | - |
| BVL38_RS25755 () | 19297..20001 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BVL38_RS25765 () | 20136..21149 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| BVL38_RS25770 () | 21294..21791 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| BVL38_RS27855 () | 21903..22193 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| BVL38_RS25775 () | 22199..22990 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| BVL38_RS25780 () | 23475..23867 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| BVL38_RS25785 () | 24187..24471 | - | 285 | WP_001376233.1 | bleomycin resistance protein | - |
| BVL38_RS25790 () | 24576..25280 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BVL38_RS25795 () | 25600..26775 | + | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| BVL38_RS25800 () | 26799..29951 | + | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| BVL38_RS25805 () | 30021..30500 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| BVL38_RS25815 () | 30602..31306 | - | 705 | WP_101973398.1 | IS6 family transposase IS15DI | Transposase |
| BVL38_RS25820 () | 31417..31803 | - | 387 | WP_001039464.1 | hypothetical protein | - |
| BVL38_RS25825 () | 32385..32618 | + | 234 | Protein_40 | transposase | - |
| BVL38_RS25830 () | 32651..34402 | - | 1752 | Protein_41 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BVL38_RS25835 () | 34391..34798 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| BVL38_RS25840 () | 34936..35820 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| BVL38_RS25845 () | 35852..37051 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| BVL38_RS25850 () | 37157..37807 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BVL38_RS25855 () | 37839..38081 | - | 243 | WP_000844627.1 | transposase | - |
| BVL38_RS25870 () | 38853..39965 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| BVL38_RS25875 () | 40461..41465 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| BVL38_RS25880 () | 41544..41978 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| BVL38_RS25885 () | 42050..42400 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| BVL38_RS27860 () | 42414..42527 | + | 114 | Protein_51 | mercuric transport protein periplasmic component | - |
| BVL38_RS25895 () | 42562..45567 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BVL38_RS25900 () | 45731..46288 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| BVL38_RS25905 () | 46471..47331 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| BVL38_RS25910 () | 47493..48308 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| BVL38_RS25915 () | 48369..49172 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| BVL38_RS25920 () | 49172..50008 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| BVL38_RS25930 () | 50314..50556 | + | 243 | WP_000844627.1 | transposase | - |
| BVL38_RS25935 () | 50588..51214 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BVL38_RS25940 () | 51320..52519 | + | 1200 | WP_063097389.1 | Tetracycline resistance protein, class C | ARG |
| BVL38_RS25945 () | 52486..52674 | - | 189 | Protein_61 | IS91 family transposase | - |
| BVL38_RS25950 () | 52786..53091 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| BVL38_RS25955 () | 53119..54333 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| BVL38_RS28085 () | 54550..54996 | - | 447 | Protein_64 | DUF3363 domain-containing protein | - |
| BVL38_RS25965 () | 55465..56957 | - | 1493 | Protein_65 | IS91 family transposase ISVsa3 | Transposase |
| BVL38_RS25970 () | 57168..57392 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| BVL38_RS25975 () | 57389..58126 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BVL38_RS27865 () | 58612..58752 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| BVL38_RS25985 () | 58758..59461 | - | 704 | Protein_69 | IS6 family transposase IS26 | Transposase |
| BVL38_RS25995 () | 59771..60220 | + | 450 | WP_023281052.1 | hypothetical protein | - |
| BVL38_RS27870 () | 60199..60495 | + | 297 | WP_158638451.1 | hypothetical protein | - |
| BVL38_RS26000 () | 60505..62552 | + | 2048 | Protein_72 | site-specific DNA-methyltransferase | - |
| BVL38_RS26005 () | 62557..65193 | + | 2637 | WP_023281054.1 | DEAD/DEAH box helicase family protein | - |
| BVL38_RS26010 () | 65236..65820 | - | 585 | WP_023281055.1 | mobilization protein MobX | - |
| BVL38_RS26015 () | 65833..66150 | - | 318 | Protein_75 | mobilization protein MobA | - |
| BVL38_RS26020 () | 66206..66910 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BVL38_RS26045 () | 68022..68213 | - | 192 | WP_032200969.1 | hypothetical protein | - |
| BVL38_RS28090 () | 68210..68488 | - | 279 | WP_166509434.1 | DNA methylase | - |
| BVL38_RS28095 () | 68457..68663 | - | 207 | WP_166513035.1 | hypothetical protein | - |
| BVL38_RS26055 () | 68663..68965 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| BVL38_RS26060 () | 69162..69335 | + | 174 | Protein_81 | DUF4113 domain-containing protein | - |
| BVL38_RS26065 () | 69476..70438 | - | 963 | WP_032200967.1 | ParB/RepB/Spo0J family partition protein | - |
| BVL38_RS26070 () | 70435..71640 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| BVL38_RS26080 () | 72015..72227 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| BVL38_RS26090 () | 72401..72652 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| BVL38_RS26095 () | 72649..72936 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BVL38_RS26100 () | 72938..73349 | + | 412 | Protein_87 | DDE-type integrase/transposase/recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|