MGE detailed information
MGE type: Prophage MGE length: 83381 bp
Accession: NZ_CP019071 Location: 3721984..3805364 Organism: Escherichia coli strain CRE1493 Replicon: chromosome
Accession: NZ_CP019071 Location: 3721984..3805364 Organism: Escherichia coli strain CRE1493 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVL38_RS19060 () | 3717733..3718881 | - | 1149 | WP_001336040.1 | hypothetical protein | - |
| BVL38_RS28020 () | 3720021..3720176 | - | 156 | Protein_3478 | AAA family ATPase | - |
| BVL38_RS19080 () | 3720220..3720456 | - | 237 | Protein_3479 | IS21 family transposase | - |
| BVL38_RS19090 () | 3721288..3721890 | - | 603 | WP_021527306.1 | hypothetical protein | - |
| BVL38_RS19095 () | 3721984..3722190 | - | 207 | WP_021517769.1 | AlpA family transcriptional regulator | - |
| BVL38_RS19105 () | 3722575..3723366 | - | 792 | WP_001335904.1 | hypothetical protein | - |
| BVL38_RS19120 () | 3724439..3724588 | + | 150 | WP_072146520.1 | hemolysin activation protein | - |
| BVL38_RS19125 () | 3724820..3725419 | + | 600 | WP_001099653.1 | inovirus-type Gp2 protein | - |
| BVL38_RS19130 () | 3725791..3726174 | + | 384 | WP_021534030.1 | hypothetical protein | - |
| BVL38_RS19135 () | 3726171..3726596 | + | 426 | WP_001013303.1 | hypothetical protein | - |
| BVL38_RS19140 () | 3727317..3728056 | + | 740 | Protein_3487 | IS3 family transposase IS629 | Transposase |
| BVL38_RS19150 () | 3728729..3730237 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| BVL38_RS19155 () | 3730327..3730800 | + | 474 | Protein_3489 | IS3 family transposase IS629 | Transposase |
| BVL38_RS19160 () | 3730876..3731125 | + | 250 | Protein_3490 | hypothetical protein | - |
| BVL38_RS27780 () | 3731122..3731202 | + | 81 | Protein_3491 | hypothetical protein | - |
| BVL38_RS28025 () | 3731315..3731395 | - | 81 | Protein_3492 | GNAT family N-acetyltransferase | - |
| BVL38_RS19165 () | 3731403..3731753 | - | 351 | WP_000597528.1 | cupin domain-containing protein | - |
| BVL38_RS19170 () | 3731766..3733358 | - | 1593 | WP_000057773.1 | autoinducer-2 kinase | - |
| BVL38_RS19175 () | 3733458..3734414 | - | 957 | WP_024176379.1 | transcriptional regulator LsrR | - |
| BVL38_RS19180 () | 3734664..3736217 | + | 1554 | WP_001178466.1 | hypothetical protein | VF |
| BVL38_RS19185 () | 3736211..3737257 | + | 1047 | WP_000911138.1 | autoinducer 2 ABC transporter permease LsrC | - |
| BVL38_RS19190 () | 3737257..3738255 | + | 999 | WP_000197460.1 | autoinducer 2 ABC transporter permease LsrD | - |
| BVL38_RS19195 () | 3738282..3739304 | + | 1023 | WP_000155278.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| BVL38_RS19200 () | 3739333..3740208 | + | 876 | WP_000774142.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| BVL38_RS19205 () | 3740257..3740547 | + | 291 | WP_000558519.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
| BVL38_RS19210 () | 3740558..3741301 | + | 744 | WP_001081495.1 | epimerase | - |
| BVL38_RS19215 () | 3741310..3741378 | + | 69 | Protein_3503 | VOC family protein | - |
| BVL38_RS19220 () | 3741676..3741933 | + | 258 | WP_001333700.1 | YjhX family toxin | - |
| BVL38_RS19225 () | 3741944..3742213 | + | 270 | Protein_3505 | class I SAM-dependent methyltransferase | - |
| BVL38_RS19235 () | 3742297..3743265 | + | 969 | Protein_3506 | IS21 family transposase IS100kyp | Transposase |
| BVL38_RS28270 () | 3743315..3743569 | + | 255 | Protein_3507 | IS21 family transposase IS100 | Transposase |
| BVL38_RS19245 () | 3743591..3744157 | + | 567 | Protein_3508 | IS21 family transposase IS100 | Transposase |
| BVL38_RS19250 () | 3744558..3745628 | - | 1071 | WP_000920172.1 | hypothetical protein | - |
| BVL38_RS19255 () | 3745606..3747312 | - | 1707 | WP_000132880.1 | zinc ribbon domain-containing protein | - |
| BVL38_RS19260 () | 3747305..3748513 | - | 1209 | WP_001087767.1 | type I restriction-modification system subunit M | - |
| BVL38_RS19265 () | 3748755..3749963 | - | 1209 | WP_000772656.1 | hypothetical protein ; Integrase | Integrase |
| BVL38_RS19275 () | 3750668..3751648 | - | 981 | WP_023147794.1 | hypothetical protein | - |
| BVL38_RS19280 () | 3752407..3753621 | + | 1215 | WP_158638449.1 | type II restriction endonuclease | - |
| BVL38_RS19285 () | 3753656..3755059 | - | 1404 | WP_172401291.1 | DNA (cytosine-5-)-methyltransferase | - |
| BVL38_RS19290 () | 3755493..3756266 | + | 774 | WP_089602599.1 | hypothetical protein | - |
| BVL38_RS19295 () | 3756327..3756881 | - | 555 | WP_062914698.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| BVL38_RS19300 () | 3756911..3757417 | + | 507 | WP_062914697.1 | hypothetical protein | - |
| BVL38_RS19305 () | 3757420..3757830 | + | 411 | WP_001032316.1 | tail fiber assembly protein | - |
| BVL38_RS19310 () | 3757811..3758044 | - | 234 | WP_001340317.1 | hypothetical protein | - |
| BVL38_RS19315 () | 3758461..3758772 | - | 312 | Protein_3521 | hypothetical protein | - |
| BVL38_RS19320 () | 3758776..3759360 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| BVL38_RS19325 () | 3759351..3760409 | - | 1059 | WP_062914695.1 | baseplate J/gp47 family protein | - |
| BVL38_RS19330 () | 3760396..3760821 | - | 426 | WP_062914694.1 | phage GP46 family protein | - |
| BVL38_RS19335 () | 3760821..3761369 | - | 549 | WP_001259087.1 | phage baseplate assembly protein V | - |
| BVL38_RS19340 () | 3761369..3762448 | - | 1080 | WP_062914693.1 | baseplate protein | - |
| BVL38_RS19345 () | 3762445..3763821 | - | 1377 | WP_062914692.1 | DNA circularization N-terminal domain-containing protein | - |
| BVL38_RS19350 () | 3763846..3765753 | - | 1908 | WP_062914691.1 | phage tail tape measure protein | - |
| BVL38_RS19355 () | 3765838..3766161 | - | 324 | WP_000571713.1 | phage tail assembly protein | - |
| BVL38_RS19360 () | 3766158..3766514 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| BVL38_RS19365 () | 3766514..3768010 | - | 1497 | WP_061353157.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| BVL38_RS19370 () | 3767994..3768164 | - | 171 | WP_062914690.1 | DUF2635 domain-containing protein | - |
| BVL38_RS19375 () | 3768173..3768733 | - | 561 | WP_101973388.1 | hypothetical protein | - |
| BVL38_RS19380 () | 3768730..3769236 | - | 507 | WP_062914689.1 | hypothetical protein | - |
| BVL38_RS19385 () | 3769211..3769621 | - | 411 | WP_062914688.1 | phage head closure protein | - |
| BVL38_RS19390 () | 3769618..3769941 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| BVL38_RS19395 () | 3769944..3770144 | - | 201 | WP_062914687.1 | hypothetical protein | - |
| BVL38_RS19400 () | 3770193..3771398 | - | 1206 | WP_000257490.1 | phage major capsid protein | - |
| BVL38_RS19405 () | 3771413..3772063 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| BVL38_RS19410 () | 3772041..3773282 | - | 1242 | WP_062914686.1 | phage portal protein | - |
| BVL38_RS19415 () | 3773282..3773464 | - | 183 | WP_000605606.1 | hypothetical protein | - |
| BVL38_RS19420 () | 3773476..3774972 | - | 1497 | WP_124064769.1 | terminase large subunit | - |
| BVL38_RS19425 () | 3775206..3775700 | - | 495 | WP_000929172.1 | phage terminase small subunit P27 family | - |
| BVL38_RS19430 () | 3775826..3776176 | - | 351 | WP_001135210.1 | HNH endonuclease | - |
| BVL38_RS19435 () | 3776304..3776738 | - | 435 | WP_016159276.1 | hypothetical protein | - |
| BVL38_RS19440 () | 3777264..3777656 | - | 393 | WP_012599940.1 | DUF2570 domain-containing protein | - |
| BVL38_RS19445 () | 3777640..3778116 | - | 477 | WP_016159277.1 | glycoside hydrolase family protein | - |
| BVL38_RS19450 () | 3778120..3778446 | - | 327 | WP_001120496.1 | phage holin, lambda family | - |
| BVL38_RS19460 () | 3778726..3779547 | + | 822 | WP_053897786.1 | hypothetical protein | - |
| BVL38_RS19465 () | 3779571..3780056 | + | 486 | WP_062914684.1 | hypothetical protein | - |
| BVL38_RS19470 () | 3780078..3780425 | - | 348 | WP_042093445.1 | antitermination protein | - |
| BVL38_RS19475 () | 3780443..3781432 | - | 990 | WP_062914683.1 | DUF968 domain-containing protein | - |
| BVL38_RS19480 () | 3781440..3782249 | - | 810 | WP_062914682.1 | KilA-N domain-containing protein | - |
| BVL38_RS19485 () | 3782269..3782658 | - | 390 | WP_062914681.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BVL38_RS19490 () | 3782655..3782981 | - | 327 | WP_000210164.1 | LexA family transcriptional regulator | - |
| BVL38_RS19495 () | 3782981..3783475 | - | 495 | WP_074151166.1 | PerC family transcriptional regulator | - |
| BVL38_RS19500 () | 3783472..3784413 | - | 942 | WP_062914680.1 | helix-turn-helix domain-containing protein | - |
| BVL38_RS19505 () | 3784403..3784582 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| BVL38_RS19510 () | 3784758..3785309 | - | 552 | WP_001434539.1 | hypothetical protein | - |
| BVL38_RS19515 () | 3785347..3785547 | - | 201 | WP_000205494.1 | cell division protein | - |
| BVL38_RS19520 () | 3785645..3786271 | + | 627 | WP_000450735.1 | LexA family transcriptional regulator | - |
| BVL38_RS19525 () | 3786457..3786753 | + | 297 | WP_000917896.1 | hypothetical protein | - |
| BVL38_RS19545 () | 3787430..3787966 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| BVL38_RS19550 () | 3787957..3788319 | + | 363 | WP_001242749.1 | phage protein | - |
| BVL38_RS19555 () | 3788319..3788624 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| BVL38_RS19565 () | 3788851..3790014 | + | 1164 | WP_000051893.1 | hypothetical protein ; Integrase | Integrase |
| BVL38_RS19575 () | 3790219..3791472 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| BVL38_RS19580 () | 3791484..3792587 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| BVL38_RS19585 () | 3792875..3793930 | + | 1056 | WP_039023169.1 | phosphoporin PhoE | - |
| BVL38_RS19590 () | 3793969..3794370 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| BVL38_RS19595 () | 3794428..3795672 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3795088..3795168 | - | 81 | NuclAT_12 | - | - |
| - () | 3795088..3795168 | - | 81 | NuclAT_12 | - | - |
| - () | 3795088..3795168 | - | 81 | NuclAT_12 | - | - |
| - () | 3795088..3795168 | - | 81 | NuclAT_12 | - | - |
| BVL38_RS19600 () | 3795764..3796222 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| BVL38_RS19605 () | 3796483..3797940 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| BVL38_RS19610 () | 3797997..3798518 | - | 522 | Protein_3574 | peptide chain release factor H | - |
| BVL38_RS19615 () | 3798514..3798720 | - | 207 | Protein_3575 | RtcB family protein | - |
| BVL38_RS19625 () | 3799038..3799490 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| BVL38_RS19630 () | 3799500..3799898 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| BVL38_RS19635 () | 3799901..3800194 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| BVL38_RS19640 () | 3800246..3801301 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| BVL38_RS19645 () | 3801372..3802157 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| BVL38_RS19650 () | 3802129..3803841 | + | 1713 | Protein_3581 | hypothetical protein | VF |
| BVL38_RS19655 () | 3804065..3804562 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| BVL38_RS19660 () | 3804738..3805487 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| BVL38_RS19665 () | 3805697..3805957 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| BVL38_RS19670 () | 3805960..3806238 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| BVL38_RS19675 () | 3806394..3807134 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| BVL38_RS19680 () | 3807105..3807872 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| BVL38_RS19685 () | 3808078..3808656 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|