MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 70134 bp
Accession: NZ_CP019047 Location: 1806260..1876393 Organism: Klebsiella pneumoniae subsp. pneumoniae strain RJA166 Replicon: chromosome
Accession: NZ_CP019047 Location: 1806260..1876393 Organism: Klebsiella pneumoniae subsp. pneumoniae strain RJA166 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RJA_RS08935 () | 1802263..1803240 | - | 978 | WP_004151466.1 | oxidoreductase | - |
| RJA_RS08940 () | 1803237..1803941 | - | 705 | WP_004180458.1 | TetR/AcrR family transcriptional regulator | - |
| RJA_RS08945 () | 1804532..1806166 | + | 1635 | WP_014907303.1 | Na+/H+ antiporter | - |
| RJA_RS08955 () | 1806865..1807968 | + | 1104 | WP_015875010.1 | hypothetical protein | - |
| RJA_RS08960 () | 1808011..1808559 | + | 549 | WP_015875009.1 | helix-turn-helix domain-containing protein | - |
| RJA_RS08965 () | 1808693..1809781 | + | 1089 | WP_032447706.1 | multiubiquitin domain-containing protein | - |
| RJA_RS08970 () | 1809778..1811148 | + | 1371 | WP_015875007.1 | ThiF family adenylyltransferase | - |
| RJA_RS08980 () | 1811796..1812611 | + | 816 | WP_015875005.1 | hypothetical protein | - |
| RJA_RS08985 () | 1813596..1814543 | + | 948 | WP_015875004.1 | DUF1738 domain-containing protein | - |
| RJA_RS08990 () | 1814739..1815485 | - | 747 | WP_015875003.1 | hypothetical protein | - |
| RJA_RS08995 () | 1815495..1817354 | - | 1860 | WP_032447705.1 | TraM recognition domain-containing protein | - |
| RJA_RS09010 () | 1818064..1818369 | - | 306 | WP_015875000.1 | hypothetical protein | - |
| RJA_RS09015 () | 1818412..1818714 | - | 303 | WP_015874999.1 | hypothetical protein | - |
| RJA_RS09020 () | 1818750..1819148 | - | 399 | WP_087525889.1 | cag pathogenicity island Cag12 family protein | - |
| RJA_RS09025 () | 1819145..1820170 | - | 1026 | WP_015874997.1 | Nucleoid-associated protein YejK | VF |
| RJA_RS09030 () | 1820160..1821410 | - | 1251 | WP_015874996.1 | 50S ribosomal protein L25 | VF |
| RJA_RS09035 () | 1821454..1822362 | - | 909 | WP_074186327.1 | Putative DNA repair helicase RadD | VF |
| RJA_RS09040 () | 1822359..1823042 | - | 684 | WP_015874994.1 | Ribosomal small subunit pseudouridine synthase A | VF |
| RJA_RS09045 () | 1823258..1824337 | - | 1080 | WP_015874993.1 | type IV secretion system protein | - |
| RJA_RS09050 () | 1824349..1824576 | - | 228 | WP_004178109.1 | EexN family lipoprotein | - |
| RJA_RS09055 () | 1824586..1825290 | - | 705 | WP_015874992.1 | type IV secretion system protein | - |
| RJA_RS09060 () | 1825308..1828046 | - | 2739 | WP_015874991.1 | Inner membrane ABC transporter permease protein YejB | VF |
| RJA_RS09065 () | 1828059..1828352 | - | 294 | WP_000600171.1 | Oligopeptide-binding protein AppA | VF |
| RJA_RS09070 () | 1828408..1828881 | - | 474 | Protein_1742 | lytic transglycosylase domain-containing protein | - |
| RJA_RS09075 () | 1828954..1829187 | - | 234 | WP_001231171.1 | hypothetical protein | - |
| RJA_RS09080 () | 1829642..1829857 | + | 216 | Protein_1744 | IS21-like element IS100kyp family helper ATPase IstB | - |
| RJA_RS09085 () | 1829925..1830415 | + | 491 | Protein_1745 | IS3 family transposase | - |
| RJA_RS09090 () | 1830495..1831148 | - | 654 | WP_015874988.1 | class I SAM-dependent methyltransferase | - |
| RJA_RS09095 () | 1831690..1832322 | + | 633 | WP_015874986.1 | Zinc-binding GTPase YeiR | VF |
| RJA_RS09100 () | 1832294..1832518 | + | 225 | WP_074186328.1 | small membrane protein | - |
| RJA_RS09105 () | 1832698..1833249 | + | 552 | WP_015874984.1 | response regulator transcription factor | - |
| RJA_RS09110 () | 1833322..1834236 | + | 915 | WP_015874983.1 | DMT family transporter | - |
| RJA_RS09115 () | 1834379..1834600 | - | 222 | WP_071882702.1 | hypothetical protein | - |
| RJA_RS09125 () | 1835241..1836470 | - | 1230 | WP_015874982.1 | hypothetical protein | VF |
| RJA_RS09130 () | 1836576..1840220 | - | 3645 | WP_048968464.1 | Sugar efflux transporter B | VF |
| RJA_RS09135 () | 1840358..1841473 | - | 1116 | WP_032447702.1 | Multiphosphoryl transfer protein | VF |
| RJA_RS09150 () | 1842345..1844519 | + | 2175 | WP_015874979.1 | Tagatose-6-phosphate kinase | VF |
| RJA_RS09155 () | 1844674..1844919 | - | 246 | WP_032447699.1 | hypothetical protein | - |
| RJA_RS09160 () | 1844955..1845371 | - | 417 | WP_015874977.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RJA_RS09165 () | 1845368..1845598 | - | 231 | WP_015874976.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RJA_RS09175 () | 1846041..1846421 | + | 381 | WP_015874975.1 | YrzE family protein | - |
| RJA_RS09185 () | 1846558..1847511 | + | 954 | Protein_1760 | IS21 family transposase IS100kyp | Transposase |
| RJA_RS09190 () | 1847606..1848332 | + | 727 | Protein_1761 | IS21 family transposase IS100kyp | Transposase |
| RJA_RS09195 () | 1848376..1848489 | - | 114 | WP_015874970.1 | hypothetical protein | - |
| RJA_RS09200 () | 1848732..1848941 | - | 210 | WP_032447696.1 | TraR/DksA family transcriptional regulator | - |
| RJA_RS09205 () | 1848931..1849512 | - | 582 | WP_000937857.1 | DUF2857 domain-containing protein | - |
| RJA_RS09210 () | 1849497..1849679 | - | 183 | WP_072001695.1 | hypothetical protein | - |
| RJA_RS09215 () | 1849701..1849886 | - | 186 | WP_000205185.1 | AlpA family transcriptional regulator | - |
| RJA_RS30155 () | 1850026..1850952 | - | 927 | WP_015874969.1 | hypothetical protein | - |
| RJA_RS09225 () | 1851825..1853846 | - | 2022 | WP_015874968.1 | hypothetical protein | VF |
| RJA_RS09230 () | 1853977..1855554 | - | 1578 | WP_015874967.1 | HTH-type transcriptional regulator CysL | VF |
| RJA_RS09235 () | 1855558..1856361 | - | 804 | WP_015874966.1 | Lysine-specific permease | VF |
| RJA_RS09240 () | 1856358..1857458 | - | 1101 | WP_032447695.1 | Colicin I receptor | VF |
| RJA_RS09245 () | 1857455..1866946 | - | 9492 | WP_015874964.1 | Colicin I receptor | VF |
| RJA_RS09250 () | 1867034..1873141 | - | 6108 | WP_087525894.1 | S-formylglutathione hydrolase YeiG | VF |
| RJA_RS09255 () | 1873332..1874291 | - | 960 | WP_000140406.1 | GTP cyclohydrolase 1 | VF |
| RJA_RS09260 () | 1874548..1876260 | + | 1713 | WP_001327262.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| RJA_RS09265 () | 1876247..1878049 | + | 1803 | WP_002212761.1 | yersiniabactin ABC transporter ATP-binding/permease protein YbtQ | - |
| RJA_RS09270 () | 1878042..1879322 | + | 1281 | WP_032447693.1 | yersiniabactin-associated zinc MFS transporter YbtX | - |
| RJA_RS09275 () | 1879350..1880654 | + | 1305 | WP_015874960.1 | yersiniabactin biosynthesis salicylate synthase YbtS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|