MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 60344 bp
Accession: NZ_CP019008 Location: 1015920..1076263 Organism: Escherichia coli strain Ecol_AZ159 Replicon: chromosome
Accession: NZ_CP019008 Location: 1015920..1076263 Organism: Escherichia coli strain Ecol_AZ159 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE939_RS06315 () | 1012521..1013669 | - | 1149 | WP_000905922.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| BE939_RS06320 () | 1013741..1014724 | - | 984 | WP_061157979.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| BE939_RS06325 () | 1015535..1015705 | - | 171 | Protein_952 | IS110 family transposase | - |
| BE939_RS06330 () | 1016047..1016889 | - | 843 | WP_001290171.1 | DUF4942 domain-containing protein | - |
| BE939_RS26320 () | 1016974..1017171 | - | 198 | WP_086795284.1 | DUF957 domain-containing protein | - |
| BE939_RS26325 () | 1017247..1017396 | - | 150 | Protein_955 | hypothetical protein | - |
| BE939_RS06340 () | 1017393..1017770 | - | 378 | WP_000854694.1 | TA system toxin CbtA family protein | Toxin Detail |
| BE939_RS06345 () | 1017860..1018228 | - | 369 | WP_001285605.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BE939_RS06350 () | 1018308..1018529 | - | 222 | Protein_958 | DUF987 domain-containing protein | - |
| BE939_RS06355 () | 1018616..1019092 | - | 477 | WP_001696592.1 | RadC family protein | - |
| BE939_RS06360 () | 1019108..1019587 | - | 480 | WP_001696591.1 | antirestriction protein | - |
| BE939_RS06365 () | 1019853..1020671 | - | 819 | WP_001175153.1 | DUF945 domain-containing protein | - |
| BE939_RS06370 () | 1020761..1020994 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| BE939_RS06375 () | 1021000..1021677 | - | 678 | WP_001097368.1 | hypothetical protein | - |
| BE939_RS06380 () | 1021796..1022680 | - | 885 | WP_000010392.1 | 50S ribosome-binding GTPase | - |
| BE939_RS06385 () | 1022865..1023995 | + | 1131 | WP_000147743.1 | hypothetical protein | - |
| BE939_RS06390 () | 1025193..1025723 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| BE939_RS06400 () | 1026393..1027124 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| BE939_RS06410 () | 1028656..1030704 | + | 2049 | WP_000792543.1 | TonB-dependent siderophore receptor IreA | - |
| BE939_RS06415 () | 1030884..1032048 | - | 1165 | Protein_970 | IS256 family transposase ISSod4 | Transposase |
| BE939_RS06420 () | 1032086..1033299 | + | 1214 | Protein_971 | IS3 family transposase | - |
| BE939_RS06425 () | 1034435..1035001 | + | 567 | WP_001126822.1 | inovirus-type Gp2 protein | - |
| BE939_RS06430 () | 1035259..1035831 | + | 573 | WP_000991576.1 | hypothetical protein | - |
| BE939_RS06435 () | 1035900..1036136 | + | 237 | WP_000958152.1 | AlpA family transcriptional regulator | - |
| BE939_RS06440 () | 1036414..1036962 | + | 549 | WP_001167445.1 | hypothetical protein | - |
| BE939_RS06445 () | 1036981..1037460 | - | 480 | WP_021572006.1 | ProQ/FinO family protein | - |
| BE939_RS06450 () | 1038026..1039045 | - | 1020 | WP_001018808.1 | LacI family DNA-binding transcriptional regulator | - |
| BE939_RS06455 () | 1039303..1039746 | + | 444 | WP_001317566.1 | PTS sugar transporter subunit IIA | - |
| BE939_RS06460 () | 1039825..1040097 | + | 273 | WP_000699820.1 | PTS sugar transporter subunit IIB | - |
| BE939_RS06465 () | 1040120..1041508 | + | 1389 | WP_000470229.1 | PTS ascorbate transporter subunit IIC | - |
| BE939_RS06470 () | 1041505..1042335 | + | 831 | WP_001101067.1 | transketolase | - |
| BE939_RS06475 () | 1042328..1043281 | + | 954 | WP_000609007.1 | transketolase family protein | - |
| BE939_RS06485 () | 1043544..1043657 | + | 114 | WP_131501864.1 | transposase | - |
| BE939_RS06495 () | 1044508..1045773 | + | 1266 | WP_000919999.1 | YadA-like family protein | - |
| BE939_RS26335 () | 1045835..1046290 | + | 456 | WP_000884153.1 | sigma-70 family RNA polymerase sigma factor | - |
| BE939_RS06505 () | 1046647..1046985 | - | 339 | WP_000760915.1 | c-type lysozyme inhibitor | - |
| BE939_RS06510 () | 1047490..1048179 | - | 690 | WP_000859647.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| BE939_RS06515 () | 1048179..1049735 | - | 1557 | WP_000983423.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| BE939_RS06520 () | 1049901..1050725 | + | 825 | WP_001293448.1 | MurR/RpiR family transcriptional regulator | - |
| BE939_RS06525 () | 1050882..1052225 | - | 1344 | WP_000551919.1 | esterase-like activity of phytase family protein | - |
| BE939_RS06530 () | 1052584..1053581 | - | 998 | Protein_991 | IS110 family transposase | - |
| BE939_RS06535 () | 1053720..1055036 | - | 1317 | WP_000803220.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| BE939_RS26685 () | 1055207..1055392 | + | 186 | WP_089581225.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| BE939_RS26690 () | 1055401..1055508 | + | 108 | WP_001313273.1 | hypothetical protein | - |
| BE939_RS06545 () | 1056170..1057213 | + | 1044 | Protein_995 | DDE-type integrase/transposase/recombinase | - |
| BE939_RS06550 () | 1057380..1059350 | + | 1971 | WP_001313270.1 | Hemin receptor | VF |
| BE939_RS06555 () | 1059369..1060160 | + | 792 | WP_000977396.1 | DUF4198 domain-containing protein | - |
| BE939_RS06565 () | 1060731..1061120 | + | 390 | WP_170983259.1 | IS66 family transposase ISEc8 | Transposase |
| BE939_RS06570 () | 1061117..1061464 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| BE939_RS06575 () | 1061514..1063050 | + | 1537 | Protein_1000 | IS66 family transposase ISEc8 | Transposase |
| BE939_RS06580 () | 1063087..1063887 | - | 801 | Protein_1001 | IS3 family transposase ISKpn37 | Transposase |
| BE939_RS06590 () | 1063951..1064299 | - | 349 | Protein_1002 | transposase | - |
| BE939_RS06595 () | 1064978..1066957 | + | 1980 | WP_000533458.1 | PhoX family phosphatase | - |
| BE939_RS26350 () | 1067007..1067201 | + | 195 | WP_126870310.1 | hypothetical protein | - |
| BE939_RS26355 () | 1067249..1067428 | + | 180 | WP_001313264.1 | hypothetical protein | - |
| BE939_RS06605 () | 1068284..1069024 | + | 741 | WP_000755103.1 | porin family protein | - |
| BE939_RS06610 () | 1069206..1070705 | + | 1500 | WP_001313263.1 | phosphoethanolamine transferase | - |
| BE939_RS06615 () | 1070814..1074329 | - | 3516 | WP_021572001.1 | ATP-binding protein | - |
| BE939_RS06625 () | 1074781..1076043 | - | 1263 | WP_001218753.1 | Prophage integrase IntS ; Integrase | Integrase |
| BE939_RS06635 () | 1076422..1077129 | - | 708 | WP_000234491.1 | DUF554 domain-containing protein | - |
| BE939_RS26855 () | 1077282..1077365 | + | 84 | WP_212734243.1 | hypothetical protein | - |
| BE939_RS06645 () | 1077528..1079663 | + | 2136 | WP_012896845.1 | ornithine decarboxylase | - |
| BE939_RS06650 () | 1079712..1080968 | - | 1257 | WP_001296363.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|