MGE detailed information
MGE type: Genomic_island MGE length: 12809 bp
Accession: NZ_CP018995 Location: 1705622..1718430 Organism: Escherichia coli strain Ecol_AZ147 Replicon: chromosome
Accession: NZ_CP018995 Location: 1705622..1718430 Organism: Escherichia coli strain Ecol_AZ147 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE962_RS11125 () | 1705622..1705888 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| BE962_RS11130 () | 1705888..1707210 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| BE962_RS11140 () | 1707522..1707730 | + | 209 | Protein_1610 | helix-turn-helix transcriptional regulator | - |
| BE962_RS11145 () | 1707985..1709211 | + | 1227 | Protein_1611 | hypothetical protein | VF |
| BE962_RS11150 () | 1709225..1709755 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| BE962_RS11155 () | 1709768..1710271 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| BE962_RS11160 () | 1710330..1711244 | + | 915 | WP_000520676.1 | hypothetical protein | VF |
| BE962_RS11165 () | 1711578..1713857 | + | 2280 | WP_000726695.1 | acid resistance putative oxidoreductase YdeP | - |
| BE962_RS11170 () | 1714105..1714302 | + | 198 | WP_000543394.1 | two-component system connector SafA | - |
| BE962_RS11175 () | 1714376..1715137 | + | 762 | WP_000060500.1 | acid stress response transcriptional regulator YdeO | - |
| BE962_RS11180 () | 1715539..1717221 | + | 1683 | WP_001295684.1 | sulfatase | - |
| BE962_RS11185 () | 1717273..1718430 | + | 1158 | WP_001295683.1 | anaerobic sulfatase maturase | - |
| BE962_RS27275 () | 1718396..1718518 | - | 123 | WP_122985823.1 | hypothetical protein | - |
| BE962_RS11190 () | 1718721..1720406 | + | 1686 | WP_004015950.1 | ABC transporter ATP-binding protein/permease | - |
| BE962_RS11195 () | 1720444..1722816 | + | 2373 | WP_000832435.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |