MGE detailed information
MGE type: Prophage MGE length: 39898 bp
Accession: NZ_CP018957 Location: 4164794..4204691 Organism: Escherichia coli strain Ecol_316 Replicon: chromosome
Accession: NZ_CP018957 Location: 4164794..4204691 Organism: Escherichia coli strain Ecol_316 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE963_RS24040 () | 4160649..4161449 | + | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
| BE963_RS24045 () | 4161462..4162313 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| BE963_RS24050 () | 4162369..4162827 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| BE963_RS24060 () | 4163256..4163822 | + | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| BE963_RS24065 () | 4163819..4164628 | - | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| BE963_RS24070 () | 4164794..4165003 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| BE963_RS24075 () | 4165016..4165159 | - | 144 | WP_001295496.1 | YobF family protein | - |
| BE963_RS24085 () | 4165829..4166116 | - | 288 | WP_001006855.1 | YebO family protein | - |
| BE963_RS24090 () | 4166191..4166334 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| BE963_RS24095 () | 4166493..4166732 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| BE963_RS24100 () | 4166876..4167667 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| BE963_RS24105 () | 4167844..4169217 | + | 1374 | WP_001587144.1 | MFS transporter | - |
| BE963_RS24110 () | 4169263..4170144 | - | 882 | WP_000984517.1 | protease HtpX | - |
| BE963_RS24115 () | 4170336..4172384 | - | 2049 | WP_001055796.1 | carboxy terminal-processing peptidase | - |
| BE963_RS24120 () | 4172404..4173101 | - | 698 | Protein_3902 | RNA chaperone ProQ | - |
| BE963_RS24125 () | 4173198..4173695 | - | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| BE963_RS24130 () | 4173825..4175108 | + | 1284 | WP_001314811.1 | membrane integrity lipid transport subunit YebS | - |
| BE963_RS24135 () | 4175077..4177710 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| BE963_RS24140 () | 4177790..4179229 | + | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| BE963_RS24145 () | 4179347..4179583 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| BE963_RS24150 () | 4179688..4179879 | + | 192 | WP_001296140.1 | YebW family protein | - |
| BE963_RS24155 () | 4179880..4180536 | - | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| - () | 4180633..4180904 | + | 272 | - | - | Antitoxin Detail |
| - () | 4180671..4180774 | - | 104 | - | - | Toxin Detail |
| BE963_RS24165 () | 4180932..4181273 | - | 342 | WP_000976481.1 | YebY family protein | - |
| BE963_RS24170 () | 4181286..4182158 | - | 873 | WP_001587145.1 | copper homeostasis membrane protein CopD | - |
| BE963_RS24175 () | 4182162..4182536 | - | 375 | WP_000168743.1 | CopC domain-containing protein YobA | - |
| BE963_RS24180 () | 4182675..4182905 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| BE963_RS24185 () | 4183007..4183663 | + | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| BE963_RS24190 () | 4183687..4184349 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| BE963_RS24195 () | 4184346..4186406 | - | 2061 | WP_000936962.1 | oligopeptidase B | - |
| BE963_RS24205 () | 4186563..4186988 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| BE963_RS24210 () | 4187045..4188214 | + | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| BE963_RS24215 () | 4188378..4189037 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| BE963_RS24220 () | 4189364..4189720 | - | 357 | WP_001295500.1 | protein YebF | - |
| BE963_RS24225 () | 4189787..4190077 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| BE963_RS24230 () | 4190211..4191389 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| BE963_RS24235 () | 4191444..4192085 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| BE963_RS24240 () | 4192122..4193933 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| BE963_RS24245 () | 4194168..4195643 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| BE963_RS24250 () | 4195981..4196850 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| BE963_RS24255 () | 4196978..4198420 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| BE963_RS24260 () | 4198552..4199523 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| BE963_RS24265 () | 4199643..4200965 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| BE963_RS24270 () | 4200981..4201913 | - | 933 | WP_024180309.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| BE963_RS24275 () | 4201992..4202747 | + | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| BE963_RS24280 () | 4202744..4203529 | + | 786 | WP_000571478.1 | hypothetical protein | VF |
| BE963_RS24285 () | 4203681..4204691 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| BE963_RS24290 () | 4204700..4205311 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| BE963_RS24295 () | 4205450..4205515 | - | 66 | WP_010723105.1 | stress response small protein YobI | - |
| BE963_RS24300 () | 4205586..4206188 | + | 603 | WP_001024914.1 | YebB family permuted papain-like enzyme | - |
| BE963_RS24305 () | 4206190..4206711 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| BE963_RS24310 () | 4206746..4207486 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| BE963_RS24315 () | 4207515..4207967 | - | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|