MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 101186 bp
Accession: NZ_CP018955 Location: 1..101186 Organism: Escherichia coli strain Ecol_316 Replicon: plasmid pEC316_2
Accession: NZ_CP018955 Location: 1..101186 Organism: Escherichia coli strain Ecol_316 Replicon: plasmid pEC316_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE963_RS00675 () | 1..1380 | - | 1380 | WP_014343487.1 | conjugal transfer protein TraH | - |
| BE963_RS00680 () | 1358..1801 | - | 444 | WP_020277953.1 | F-type conjugal transfer protein TrbF | - |
| BE963_RS00685 () | 1847..2404 | - | 558 | WP_032736782.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BE963_RS00690 () | 2376..2615 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BE963_RS00695 () | 2626..3378 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BE963_RS00700 () | 3399..3725 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| BE963_RS00705 () | 3738..3986 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| BE963_RS00710 () | 3964..4218 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| BE963_RS00715 () | 4250..6205 | - | 1956 | WP_030003482.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BE963_RS00720 () | 6264..6902 | - | 639 | WP_078174825.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BE963_RS00725 () | 6915..7904 | - | 990 | WP_032441886.1 | conjugal transfer pilus assembly protein TraU | - |
| BE963_RS00730 () | 7901..8302 | - | 402 | WP_022644934.1 | hypothetical protein | - |
| BE963_RS00735 () | 8337..8972 | - | 636 | WP_020325113.1 | type-F conjugative transfer system protein TraW | - |
| BE963_RS00740 () | 8969..9361 | - | 393 | WP_022644935.1 | type-F conjugative transfer system protein TrbI | - |
| BE963_RS00745 () | 9361..12000 | - | 2640 | WP_022631517.1 | type IV secretion system protein TraC | - |
| BE963_RS00750 () | 12072..12470 | - | 399 | WP_074194504.1 | hypothetical protein | - |
| BE963_RS29320 () | 12478..12765 | - | 288 | Protein_17 | hypothetical protein | - |
| BE963_RS00760 () | 12847..13251 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| BE963_RS00765 () | 13318..13629 | - | 312 | WP_025712701.1 | hypothetical protein | - |
| BE963_RS00770 () | 13630..13848 | - | 219 | WP_074194505.1 | hypothetical protein | - |
| BE963_RS00775 () | 13954..14364 | - | 411 | WP_078174848.1 | hypothetical protein | - |
| BE963_RS00780 () | 14496..15080 | - | 585 | WP_013023822.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BE963_RS00785 () | 15194..16618 | - | 1425 | WP_032426793.1 | conjugal transfer protein TraB | - |
| BE963_RS00790 () | 16618..17358 | - | 741 | WP_064161334.1 | type-F conjugative transfer system secretin TraK | - |
| BE963_RS00795 () | 17345..17911 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| BE963_RS00800 () | 17931..18236 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| BE963_RS00805 () | 18250..18618 | - | 369 | WP_048295882.1 | type IV conjugative transfer system pilin TraA | - |
| BE963_RS00810 () | 18672..19043 | - | 372 | WP_004208838.1 | TraY domain-containing protein | - |
| BE963_RS00815 () | 19127..19822 | - | 696 | WP_074187711.1 | transcriptional regulator TraJ family protein | - |
| BE963_RS00820 () | 20029..20421 | - | 393 | WP_004206766.1 | relaxosome protein TraM | - |
| BE963_RS00825 () | 20856..21341 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| BE963_RS00830 () | 21374..21703 | - | 330 | WP_078174829.1 | hypothetical protein | - |
| BE963_RS00835 () | 21736..22557 | - | 822 | WP_032454971.1 | DUF945 domain-containing protein | - |
| BE963_RS00850 () | 23373..23772 | - | 400 | Protein_34 | hypothetical protein | - |
| BE963_RS00855 () | 23844..23966 | - | 123 | Protein_35 | helix-turn-helix domain-containing protein | - |
| BE963_RS00860 () | 24019..24723 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BE963_RS00865 () | 24786..25643 | + | 858 | Protein_37 | IS5 family transposase IS5D | Transposase |
| BE963_RS00870 () | 25792..26265 | + | 474 | Protein_38 | mannitol operon repressor MtlR | - |
| BE963_RS00875 () | 26271..26486 | - | 216 | WP_032427578.1 | hypothetical protein | - |
| BE963_RS28385 () | 26706..26837 | + | 132 | Protein_40 | IS5/IS1182 family transposase | - |
| BE963_RS00885 () | 26873..28420 | - | 1548 | Protein_41 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| BE963_RS00890 () | 28461..29165 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BE963_RS00895 () | 29218..29340 | + | 123 | Protein_43 | helix-turn-helix domain-containing protein | - |
| BE963_RS00900 () | 29496..32858 | - | 3363 | WP_004197500.1 | DEAD/DEAH box helicase family protein | - |
| BE963_RS00905 () | 32858..35998 | - | 3141 | WP_004197497.1 | site-specific DNA-methyltransferase | - |
| BE963_RS00910 () | 36053..39016 | - | 2964 | WP_078174833.1 | DEAD/DEAH box helicase | - |
| BE963_RS00915 () | 39003..39248 | - | 246 | WP_001568063.1 | helix-turn-helix transcriptional regulator | - |
| BE963_RS00920 () | 39516..39764 | + | 249 | Protein_48 | IS3 family transposase ISEhe3 | Transposase |
| BE963_RS00925 () | 39774..40925 | - | 1152 | WP_040063370.1 | IS30 family transposase IS30H | Transposase |
| BE963_RS00930 () | 40990..41886 | + | 897 | Protein_50 | IS3 family transposase ISEhe3 | Transposase |
| BE963_RS28390 () | 41902..42075 | + | 174 | Protein_51 | IS481 family transposase | - |
| BE963_RS00940 () | 43706..44080 | - | 375 | WP_001568060.1 | hypothetical protein | - |
| BE963_RS00945 () | 44136..44462 | - | 327 | WP_001568059.1 | hypothetical protein | - |
| BE963_RS00950 () | 44459..45187 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| BE963_RS00955 () | 45184..45615 | - | 432 | WP_020804497.1 | conjugation system SOS inhibitor PsiB | - |
| BE963_RS00960 () | 45660..47717 | - | 2058 | WP_009310025.1 | ParB/RepB/Spo0J family partition protein | - |
| BE963_RS00965 () | 47787..48035 | - | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
| BE963_RS00970 () | 48084..48626 | - | 543 | WP_020804498.1 | single-stranded DNA-binding protein | - |
| BE963_RS00990 () | 49457..50020 | - | 564 | WP_009310029.1 | methyltransferase | - |
| BE963_RS00995 () | 50068..51423 | - | 1356 | WP_009310030.1 | DUF3560 domain-containing protein | - |
| BE963_RS01000 () | 51475..51705 | - | 231 | WP_009310031.1 | hypothetical protein | - |
| BE963_RS01005 () | 51797..52024 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| BE963_RS01020 () | 52704..53024 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| BE963_RS01025 () | 53059..53313 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| BE963_RS01030 () | 53501..53692 | - | 192 | WP_023332910.1 | hypothetical protein | - |
| BE963_RS01035 () | 53735..54241 | - | 507 | WP_023332911.1 | antirestriction protein ArdA | - |
| BE963_RS29325 () | 54284..54712 | - | 429 | WP_001568045.1 | antirestriction protein | - |
| BE963_RS01045 () | 55393..56160 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| BE963_RS01050 () | 56214..56633 | - | 420 | WP_029497570.1 | DUF1380 domain-containing protein | - |
| BE963_RS01055 () | 56643..56864 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| BE963_RS01060 () | 56864..57565 | - | 702 | WP_011977792.1 | DNA methylase | - |
| BE963_RS29330 () | 57637..57907 | - | 271 | Protein_73 | hypothetical protein | - |
| BE963_RS01070 () | 57951..58286 | - | 336 | WP_004194745.1 | hypothetical protein | - |
| BE963_RS01075 () | 58283..58516 | - | 234 | WP_004194746.1 | hypothetical protein | - |
| BE963_RS28970 () | 58570..58863 | + | 294 | WP_162780336.1 | hypothetical protein | - |
| BE963_RS01085 () | 59124..59354 | - | 231 | WP_009309993.1 | hypothetical protein | - |
| BE963_RS01090 () | 59418..60089 | - | 672 | WP_078174835.1 | plasmid partitioning/stability family protein | - |
| BE963_RS01095 () | 60092..61063 | - | 972 | WP_001568038.1 | hypothetical protein | - |
| BE963_RS01100 () | 61312..62799 | - | 1488 | WP_023332914.1 | Group II intron-encoded protein LtrA | VF |
| BE963_RS01110 () | 63205..63636 | + | 432 | WP_004197746.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BE963_RS01115 () | 63636..64499 | + | 864 | Protein_82 | translesion error-prone DNA polymerase V subunit UmuC | - |
| BE963_RS01120 () | 64502..65110 | + | 609 | Protein_83 | DUF4113 domain-containing protein | - |
| BE963_RS01125 () | 65511..66407 | + | 897 | WP_004197749.1 | RepB family plasmid replication initiator protein | - |
| BE963_RS01130 () | 66729..67934 | + | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| BE963_RS01135 () | 67931..68905 | + | 975 | WP_004197750.1 | ParB/RepB/Spo0J family partition protein | - |
| BE963_RS01145 () | 69424..70392 | - | 969 | WP_072269220.1 | IS5 family transposase IS903B | Transposase |
| BE963_RS01150 () | 70687..71712 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| BE963_RS01155 () | 71796..72053 | + | 258 | Protein_89 | hypothetical protein | - |
| BE963_RS01160 () | 72434..72907 | + | 474 | WP_047353183.1 | YkgJ family cysteine cluster protein | - |
| BE963_RS01165 () | 73064..74026 | - | 963 | WP_004197772.1 | Abi family protein | - |
| BE963_RS01170 () | 74193..74975 | - | 783 | WP_004197768.1 | IS91 family transposase ISSod25 | Transposase |
| BE963_RS01175 () | 74975..75793 | - | 819 | WP_004197776.1 | hypothetical protein | - |
| BE963_RS01180 () | 75842..76171 | - | 330 | WP_004197773.1 | hypothetical protein | - |
| BE963_RS01185 () | 76199..76471 | - | 273 | WP_162138577.1 | hypothetical protein | - |
| BE963_RS01190 () | 76563..76883 | - | 321 | WP_004197770.1 | hypothetical protein | - |
| BE963_RS01195 () | 77011..77471 | - | 461 | Protein_97 | hypothetical protein | - |
| BE963_RS01200 () | 77428..77658 | + | 231 | WP_078174839.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BE963_RS01205 () | 77655..78071 | + | 417 | WP_078174841.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BE963_RS01210 () | 78145..78381 | + | 237 | WP_001348075.1 | AAA family ATPase | - |
| BE963_RS01215 () | 78428..79132 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BE963_RS28410 () | 79365..79526 | + | 162 | WP_001326844.1 | hypothetical protein | - |
| BE963_RS01220 () | 79523..80134 | - | 612 | WP_000176305.1 | DUF2913 family protein | - |
| BE963_RS01225 () | 80188..80469 | - | 282 | WP_001568067.1 | hypothetical protein | - |
| BE963_RS01230 () | 80642..80977 | + | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| BE963_RS01235 () | 81965..82978 | - | 1014 | WP_063267105.1 | replication initiation protein | - |
| BE963_RS01240 () | 83034..83144 | - | 111 | Protein_107 | replication protein | - |
| BE963_RS28415 () | 83137..83208 | - | 72 | WP_071786674.1 | RepA leader peptide Tap | - |
| BE963_RS01250 () | 83420..83689 | - | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| BE963_RS01255 () | 83825..84376 | - | 552 | WP_078174850.1 | Phospholipase D | VF |
| BE963_RS01260 () | 84481..84789 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| BE963_RS01265 () | 84786..85436 | - | 651 | WP_016831064.1 | DUF2726 domain-containing protein | - |
| BE963_RS01270 () | 85492..85713 | - | 222 | WP_004195564.1 | hypothetical protein | - |
| BE963_RS28420 () | 85763..86365 | - | 603 | WP_072216873.1 | hypothetical protein | - |
| BE963_RS01280 () | 86526..87119 | - | 594 | WP_064158651.1 | fertility inhibition protein FinO | - |
| BE963_RS01285 () | 87276..88001 | - | 726 | WP_032744225.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| BE963_RS01290 () | 88081..93342 | - | 5262 | WP_078174843.1 | Multifunctional conjugation protein TraI | Relaxase |
| BE963_RS01295 () | 93342..95654 | - | 2313 | Protein_118 | type IV conjugative transfer system coupling protein TraD | - |
| BE963_RS28990 () | 95781..96470 | - | 690 | WP_014343485.1 | hypothetical protein | - |
| BE963_RS01305 () | 96663..97280 | - | 618 | WP_015065642.1 | hypothetical protein | - |
| BE963_RS28425 () | 97246..97392 | - | 147 | WP_004197893.1 | hypothetical protein | - |
| BE963_RS01310 () | 97800..98333 | - | 534 | WP_004197891.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|