MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92708 bp
Accession: NZ_CP018849 Location: 1..92708 Organism: Xanthomonas citri pv. citri strain LL074-4 Replicon: plasmid pLL074-4.2
Accession: NZ_CP018849 Location: 1..92708 Organism: Xanthomonas citri pv. citri strain LL074-4 Replicon: plasmid pLL074-4.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI314_RS24475 () | 349..1116 | + | 768 | WP_011052998.1 | ParA family protein | - |
| BI314_RS24480 () | 1130..2161 | + | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| BI314_RS24485 () | 2213..2542 | + | 330 | WP_011052996.1 | partition gene repressor | - |
| BI314_RS24490 () | 2546..2782 | + | 237 | WP_015462622.1 | Wgr family protein | - |
| BI314_RS25335 () | 2897..3983 | + | 1087 | Protein_4 | IS3 family transposase ISXac2 | Transposase |
| BI314_RS26370 () | 4148..4363 | - | 216 | WP_155400515.1 | hypothetical protein | - |
| BI314_RS24515 () | 4676..4966 | + | 291 | WP_003490957.1 | hypothetical protein | - |
| BI314_RS24520 () | 4987..5364 | + | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| BI314_RS24525 () | 5361..5660 | + | 300 | WP_040156233.1 | VirB3 family type IV secretion system protein | - |
| BI314_RS24530 () | 5683..8316 | + | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| BI314_RS24535 () | 8313..8981 | + | 669 | WP_040156235.1 | hypothetical protein | - |
| BI314_RS24540 () | 9029..9241 | + | 213 | WP_015462617.1 | hypothetical protein | - |
| BI314_RS24545 () | 9234..9614 | + | 381 | WP_015462616.1 | hypothetical protein | - |
| BI314_RS24550 () | 9616..10482 | + | 867 | WP_011052987.1 | type IV secretion system protein | - |
| BI314_RS24555 () | 10479..11153 | + | 675 | WP_011052986.1 | type IV secretion system protein | - |
| BI314_RS24560 () | 11178..11960 | + | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| BI314_RS24565 () | 11962..13182 | + | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| BI314_RS24570 () | 13193..14215 | + | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| BI314_RS24575 () | 14226..15104 | + | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| BI314_RS24580 () | 15230..15649 | + | 420 | WP_011052981.1 | hypothetical protein | - |
| BI314_RS24585 () | 15726..16112 | + | 387 | WP_003491149.1 | hypothetical protein | - |
| BI314_RS24590 () | 16249..16467 | + | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| BI314_RS24595 () | 16464..16790 | + | 327 | WP_173667216.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BI314_RS24600 () | 16844..19819 | - | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| BI314_RS24605 () | 19833..21407 | - | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| BI314_RS26455 () | 21666..22007 | - | 342 | WP_031425612.1 | hypothetical protein | - |
| BI314_RS24615 () | 22206..22556 | - | 351 | WP_015462612.1 | hypothetical protein | - |
| BI314_RS24620 () | 22847..23119 | + | 273 | WP_005934628.1 | hypothetical protein | - |
| BI314_RS26380 () | 23261..23434 | - | 174 | WP_011052974.1 | hypothetical protein | - |
| BI314_RS24625 () | 23434..23829 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| BI314_RS24630 () | 24177..24623 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| BI314_RS24635 () | 24620..25329 | + | 710 | Protein_31 | plasmid stabilization protein | - |
| BI314_RS24640 () | 25378..25731 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| BI314_RS24645 () | 26126..26335 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| BI314_RS24650 () | 26332..26640 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| BI314_RS24655 () | 27096..27722 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| BI314_RS24660 () | 27719..28042 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| BI314_RS24665 () | 28187..28501 | + | 315 | WP_005918227.1 | hypothetical protein | - |
| BI314_RS24670 () | 28749..29969 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| BI314_RS24675 () | 30335..33826 | - | 3492 | WP_075155172.1 | TAL effector repeat-containing protein | - |
| BI314_RS24685 () | 35079..35315 | - | 237 | WP_015463816.1 | hypothetical protein | - |
| BI314_RS24690 () | 35312..35941 | - | 630 | WP_015463817.1 | AAA family ATPase | - |
| BI314_RS24695 () | 36024..36761 | - | 738 | WP_011052960.1 | DNA-binding protein | - |
| BI314_RS24700 () | 37396..38217 | - | 822 | WP_011052929.1 | hypothetical protein | - |
| BI314_RS26385 () | 38857..39021 | + | 165 | WP_155400514.1 | hypothetical protein | - |
| BI314_RS25345 () | 39070..40157 | + | 1088 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
| BI314_RS24730 () | 40123..40752 | - | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| BI314_RS24735 () | 40932..41183 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| BI314_RS24740 () | 41180..41575 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| BI314_RS24745 () | 41736..42113 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| BI314_RS24750 () | 42172..42417 | - | 246 | Protein_50 | IS3 family transposase ISStma14 | Transposase |
| BI314_RS24755 () | 42530..42802 | + | 273 | WP_005934628.1 | hypothetical protein | - |
| BI314_RS26390 () | 42944..43117 | - | 174 | WP_011052974.1 | hypothetical protein | - |
| BI314_RS24760 () | 43117..43512 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| BI314_RS24765 () | 43860..44306 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| BI314_RS24770 () | 44303..45012 | + | 710 | Protein_55 | plasmid stabilization protein | - |
| BI314_RS24775 () | 45061..45414 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| BI314_RS24780 () | 45809..46018 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| BI314_RS24785 () | 46015..46323 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| BI314_RS24790 () | 46779..47405 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| BI314_RS24795 () | 47402..47725 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| BI314_RS24800 () | 47870..48184 | + | 315 | WP_005918227.1 | hypothetical protein | - |
| BI314_RS24805 () | 48432..49652 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| BI314_RS24810 () | 50018..53308 | - | 3291 | WP_075150219.1 | TAL effector repeat-containing protein | - |
| BI314_RS24820 () | 54667..55743 | - | 1077 | WP_040107542.1 | hypothetical protein | - |
| BI314_RS24825 () | 55876..56931 | - | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| BI314_RS24830 () | 57123..58397 | + | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| BI314_RS24835 () | 58405..61394 | + | 2990 | Protein_67 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| BI314_RS24840 () | 61527..62804 | + | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| BI314_RS24845 () | 62847..63191 | + | 345 | WP_075150220.1 | hypothetical protein | - |
| BI314_RS24850 () | 63271..63813 | - | 543 | WP_011052965.1 | hypothetical protein | - |
| BI314_RS24855 () | 63810..64415 | - | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| BI314_RS24860 () | 64412..64861 | - | 450 | WP_015462602.1 | hypothetical protein | - |
| BI314_RS24865 () | 65188..65787 | - | 600 | WP_015462601.1 | hypothetical protein | - |
| BI314_RS24870 () | 65934..66263 | + | 330 | WP_005918642.1 | hypothetical protein | - |
| BI314_RS26135 () | 66313..66519 | + | 207 | WP_011052961.1 | hypothetical protein | - |
| BI314_RS24875 () | 66573..66989 | + | 417 | WP_087962480.1 | transposase | - |
| BI314_RS24880 () | 67120..67302 | - | 183 | Protein_77 | helix-turn-helix domain-containing protein | - |
| BI314_RS24885 () | 67346..68269 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| BI314_RS24890 () | 68483..68722 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| BI314_RS24895 () | 68722..69141 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BI314_RS24900 () | 69146..72121 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BI314_RS24905 () | 72140..72838 | + | 699 | WP_058958626.1 | UPF0149 family protein | - |
| BI314_RS24910 () | 72883..73029 | + | 147 | Protein_83 | transposase | - |
| BI314_RS24915 () | 73128..77015 | - | 3888 | WP_075150221.1 | TAL effector repeat-containing protein | - |
| BI314_RS26395 () | 77261..77482 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| BI314_RS24935 () | 77772..78308 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| BI314_RS24940 () | 78298..78510 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| BI314_RS26140 () | 78507..78758 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| BI314_RS24945 () | 78781..79113 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BI314_RS24950 () | 79113..79370 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| BI314_RS24955 () | 79576..80178 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| BI314_RS24960 () | 80162..80466 | + | 305 | Protein_92 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| BI314_RS24965 () | 80633..80839 | - | 207 | Protein_93 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| BI314_RS24970 () | 80884..81453 | - | 570 | Protein_94 | UPF0149 family protein | - |
| BI314_RS24975 () | 81472..82686 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| BI314_RS26145 () | 82760..82942 | - | 183 | Protein_96 | UPF0149 family protein | - |
| BI314_RS24990 () | 82961..85936 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BI314_RS24995 () | 85941..86360 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BI314_RS25000 () | 86360..86599 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| BI314_RS25005 () | 86813..87736 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| BI314_RS25010 () | 87843..88415 | - | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| BI314_RS25015 () | 88606..88866 | + | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| BI314_RS25020 () | 88863..89264 | + | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | - |
| BI314_RS25025 () | 89289..89552 | + | 264 | WP_005917846.1 | hypothetical protein | - |
| BI314_RS25030 () | 89559..90746 | + | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| BI314_RS25035 () | 91026..92252 | + | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|