MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 25220 bp
Accession: NZ_CP018794 Location: 1..25220 Organism: Campylobacter sp. RM12175 Replicon: plasmid pVIC12175-1
Accession: NZ_CP018794 Location: 1..25220 Organism: Campylobacter sp. RM12175 Replicon: plasmid pVIC12175-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CVIC12175_RS08275 () | 1..450 | + | 450 | WP_086257342.1 | GNAT family N-acetyltransferase | - |
| CVIC12175_RS08280 () | 463..801 | + | 339 | WP_086257341.1 | hypothetical protein | - |
| CVIC12175_RS08285 () | 1417..2247 | + | 831 | WP_180380699.1 | hypothetical protein | - |
| CVIC12175_RS08290 () | 2244..2654 | + | 411 | WP_086257340.1 | type II toxin-antitoxin system VapC family toxin | - |
| CVIC12175_RS08295 () | 2838..3782 | + | 945 | WP_065843589.1 | Type IV secretion system protein VirB11 | VF |
| CVIC12175_RS08300 () | 3803..4096 | + | 294 | WP_086257339.1 | TrbC/VirB2 family protein | - |
| CVIC12175_RS08305 () | 4093..4383 | + | 291 | WP_040126377.1 | VirB3 family type IV secretion system protein | - |
| CVIC12175_RS08310 () | 4387..6846 | + | 2460 | WP_086316033.1 | conjugal transfer protein TrbE | - |
| CVIC12175_RS08315 () | 6843..7382 | + | 540 | WP_086257360.1 | Bro-N domain-containing protein | - |
| CVIC12175_RS08320 () | 7379..8119 | + | 741 | WP_086257359.1 | hypothetical protein | - |
| CVIC12175_RS08325 () | 8469..9296 | + | 828 | WP_086257363.1 | P-type conjugative transfer protein TrbJ | - |
| CVIC12175_RS08330 () | 9352..9579 | + | 228 | WP_086257358.1 | EexN family lipoprotein | - |
| CVIC12175_RS08335 () | 9533..10750 | + | 1218 | WP_086316034.1 | type IV secretion system protein | - |
| CVIC12175_RS08340 () | 10909..11592 | + | 684 | WP_086257356.1 | conjugal transfer protein TrbF | - |
| CVIC12175_RS08345 () | 11605..12522 | + | 918 | WP_086257355.1 | P-type conjugative transfer protein TrbG | - |
| CVIC12175_RS08350 () | 12523..12957 | + | 435 | WP_086257354.1 | hypothetical protein | - |
| CVIC12175_RS08355 () | 12967..14184 | + | 1218 | WP_086257353.1 | Type IV secretion system protein virB10 | VF |
| CVIC12175_RS08360 () | 14217..14828 | + | 612 | WP_086257362.1 | Type IV secretion system protein virB1 | VF |
| CVIC12175_RS08365 () | 14886..15245 | + | 360 | WP_086257352.1 | single-stranded DNA-binding protein | - |
| CVIC12175_RS08575 () | 15238..15390 | + | 153 | WP_164468611.1 | hypothetical protein | - |
| CVIC12175_RS08370 () | 15380..17569 | + | 2190 | WP_086257351.1 | DUF1738 domain-containing protein | - |
| CVIC12175_RS08375 () | 17579..19405 | + | 1827 | WP_086257350.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CVIC12175_RS08380 () | 19417..20124 | + | 708 | WP_002850984.1 | conjugal transfer protein TraL | - |
| CVIC12175_RS08385 () | 20241..20489 | + | 249 | WP_086257349.1 | hypothetical protein | Antitoxin Detail |
| CVIC12175_RS08390 () | 20473..21129 | + | 657 | WP_086257348.1 | Fic family protein | Toxin Detail |
| CVIC12175_RS08395 () | 21190..21648 | + | 459 | WP_086257347.1 | S26 family signal peptidase | - |
| CVIC12175_RS08400 () | 21645..22016 | + | 372 | WP_086257346.1 | conjugal transfer protein TraM | - |
| CVIC12175_RS08405 () | 22127..22813 | + | 687 | WP_086257345.1 | Chromosome-partitioning ATPase Soj | VF |
| CVIC12175_RS08410 () | 22817..23026 | + | 210 | WP_040126369.1 | hypothetical protein | - |
| CVIC12175_RS08415 () | 23101..24663 | - | 1563 | WP_086257344.1 | Protein TraI | Relaxase |
| CVIC12175_RS08420 () | 24638..25006 | - | 369 | WP_086257343.1 | DNA transfer protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|