MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 24958 bp
Accession: NZ_CP018792 Location: 1..24958 Organism: Campylobacter sp. RM8964 Replicon: plasmid pVIC8964
Accession: NZ_CP018792 Location: 1..24958 Organism: Campylobacter sp. RM8964 Replicon: plasmid pVIC8964
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CVIC8964_RS08895 () | 1..450 | + | 450 | WP_086334254.1 | GNAT family N-acetyltransferase | - |
| CVIC8964_RS08900 () | 462..800 | + | 339 | WP_086334255.1 | hypothetical protein | - |
| CVIC8964_RS08905 () | 1411..2241 | + | 831 | WP_180380699.1 | hypothetical protein | - |
| CVIC8964_RS08910 () | 2238..2648 | + | 411 | WP_086257340.1 | type II toxin-antitoxin system VapC family toxin | - |
| CVIC8964_RS08915 () | 2833..3777 | + | 945 | WP_086334256.1 | Type IV secretion system protein VirB11 | VF |
| CVIC8964_RS08920 () | 3798..4091 | + | 294 | WP_086257339.1 | TrbC/VirB2 family protein | - |
| CVIC8964_RS08925 () | 4088..4378 | + | 291 | WP_040126377.1 | VirB3 family type IV secretion system protein | - |
| CVIC8964_RS08930 () | 4382..6841 | + | 2460 | WP_086334257.1 | conjugal transfer protein TrbE | - |
| CVIC8964_RS08935 () | 6838..7392 | + | 555 | WP_086334258.1 | hypothetical protein | - |
| CVIC8964_RS08940 () | 7389..8129 | + | 741 | WP_086334259.1 | hypothetical protein | - |
| CVIC8964_RS08945 () | 8248..9111 | + | 864 | WP_086334274.1 | P-type conjugative transfer protein TrbJ | - |
| CVIC8964_RS08950 () | 9161..9424 | + | 264 | WP_086334260.1 | EexN family lipoprotein | - |
| CVIC8964_RS08955 () | 9315..10607 | + | 1293 | WP_086334261.1 | P-type conjugative transfer protein TrbL | - |
| CVIC8964_RS08960 () | 10645..11328 | + | 684 | WP_059427753.1 | conjugal transfer protein TrbF | - |
| CVIC8964_RS08965 () | 11341..12258 | + | 918 | WP_086334262.1 | P-type conjugative transfer protein TrbG | - |
| CVIC8964_RS08970 () | 12259..12693 | + | 435 | WP_024305474.1 | hypothetical protein | - |
| CVIC8964_RS08975 () | 12703..13920 | + | 1218 | WP_086334263.1 | Type IV secretion system protein virB10 | VF |
| CVIC8964_RS08980 () | 13953..14564 | + | 612 | WP_086334275.1 | Type IV secretion system protein virB1 | VF |
| CVIC8964_RS08985 () | 14622..14981 | + | 360 | WP_086334264.1 | single-stranded DNA-binding protein | - |
| CVIC8964_RS09190 () | 14974..15126 | + | 153 | WP_164468611.1 | hypothetical protein | - |
| CVIC8964_RS08990 () | 15116..17305 | + | 2190 | WP_086334265.1 | DUF1738 domain-containing protein | - |
| CVIC8964_RS08995 () | 17315..19141 | + | 1827 | WP_086334266.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CVIC8964_RS09000 () | 19153..19860 | + | 708 | WP_086334267.1 | conjugal transfer protein TraL | - |
| CVIC8964_RS09005 () | 19977..20225 | + | 249 | WP_086257349.1 | hypothetical protein | Antitoxin Detail |
| CVIC8964_RS09010 () | 20209..20865 | + | 657 | WP_086334268.1 | Fic family protein | Toxin Detail |
| CVIC8964_RS09015 () | 20926..21381 | + | 456 | WP_086334269.1 | S26 family signal peptidase | - |
| CVIC8964_RS09020 () | 21378..21749 | + | 372 | WP_086334270.1 | conjugal transfer protein TraM | - |
| CVIC8964_RS09025 () | 21860..22546 | + | 687 | WP_086334271.1 | Chromosome-partitioning ATPase Soj | VF |
| CVIC8964_RS09030 () | 22550..22759 | + | 210 | WP_040126369.1 | hypothetical protein | - |
| CVIC8964_RS09035 () | 22839..24401 | - | 1563 | WP_086334272.1 | Protein TraI | Relaxase |
| CVIC8964_RS09040 () | 24376..24744 | - | 369 | WP_086334273.1 | DNA transfer protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|