Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) FicTA/Fic(toxin)
Location 19977..20865 Replicon plasmid pVIC8964
Accession NZ_CP018792
Organism Campylobacter sp. RM8964

Toxin (Protein)


Gene name Fic Uniprot ID -
Locus tag CVIC8964_RS09010 Protein ID WP_086334268.1
Coordinates 20209..20865 (+) Length 219 a.a.

Antitoxin (Protein)


Gene name Fti Uniprot ID -
Locus tag CVIC8964_RS09005 Protein ID WP_086257349.1
Coordinates 19977..20225 (+) Length 83 a.a.

Genomic Context

CVIC8964_RS08990CVIC8964_RS08995CVIC8964_RS09000CVIC8964_RS09005CVIC8964_RS09010CVIC8964_RS09015CVIC8964_RS09020CVIC8964_RS09025CVIC8964_RS09030CVIC8964_RS09035CVIC8964_RS09040
Location: 15116..17305 (2190 bp)
Type: Others
Protein ID: WP_086334265.1
Location: 17315..19141 (1827 bp)
Type: Others
Protein ID: WP_086334266.1
Location: 19153..19860 (708 bp)
Type: Others
Protein ID: WP_086334267.1
Location: 19977..20225 (249 bp)
Type: Antitoxin
Protein ID: WP_086257349.1
Location: 20209..20865 (657 bp)
Type: Toxin
Protein ID: WP_086334268.1
Location: 20926..21381 (456 bp)
Type: Others
Protein ID: WP_086334269.1
Location: 21378..21749 (372 bp)
Type: Others
Protein ID: WP_086334270.1
Location: 21860..22546 (687 bp)
Type: Others
Protein ID: WP_086334271.1
Location: 22550..22759 (210 bp)
Type: Others
Protein ID: WP_040126369.1
Location: 22839..24401 (1563 bp)
Type: Others
Protein ID: WP_086334272.1
Location: 24376..24744 (369 bp)
Type: Others
Protein ID: WP_086334273.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
CVIC8964_RS0899015116..17305+2190WP_086334265.1DUF1738 domain-containing protein-
CVIC8964_RS0899517315..19141+1827WP_086334266.1type IV secretory system conjugative DNA transfer family protein-
CVIC8964_RS0900019153..19860+708WP_086334267.1conjugal transfer protein TraL-
CVIC8964_RS0900519977..20225+249WP_086257349.1hypothetical proteinAntitoxin
CVIC8964_RS0901020209..20865+657WP_086334268.1Fic family proteinToxin
CVIC8964_RS0901520926..21381+456WP_086334269.1S26 family signal peptidase-
CVIC8964_RS0902021378..21749+372WP_086334270.1conjugal transfer protein TraM-
CVIC8964_RS0902521860..22546+687WP_086334271.1AAA family ATPase-
CVIC8964_RS0903022550..22759+210WP_040126369.1hypothetical protein-
CVIC8964_RS0903522839..24401-1563WP_086334272.1relaxase/mobilization nuclease domain-containing protein-
CVIC8964_RS0904024376..24744-369WP_086334273.1DNA transfer protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideNon-Mobilizable plasmid--1..2495824958


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Fido domain

(50-159)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 219 a.a.        Molecular weight: 25208.85 Da        Isoelectric Point: 9.8126

>T70529 WP_086334268.1 NZ_CP018792:20209-20865 [Campylobacter sp. RM8964]
MKENNEEFFKRLITDNKLGIKDEKLFDKESRFYTGLRERELTLNPIKGNFDYQHLKNIHKHIFQDVFHWAGKDRMEVGLH
GNFGKYAPNGTITNFVPGKDLNATAQQIFTWLKEDNYLTNSKDLNDFAKNLAEFARNLNALHPFREGNGRTQRIFLNELA
KNAGYKLDLNLIPKDKMIMASVEASQLKLGKLEAIIKTNLKSFKQNLEKENTLGLSLC

Download         Length: 657 bp

>T70529 NZ_CP018792:20209-20865 [Campylobacter sp. RM8964]
ATGAAAGAAAACAATGAAGAATTTTTTAAAAGATTAATTACAGATAATAAACTCGGTATAAAAGATGAAAAATTATTTGA
TAAAGAATCAAGATTTTATACTGGTTTAAGAGAAAGAGAGCTTACGCTCAATCCTATCAAAGGCAATTTCGATTATCAGC
ACTTAAAAAATATACATAAACATATTTTTCAAGATGTATTTCACTGGGCTGGAAAAGATAGAATGGAAGTAGGCTTGCAT
GGAAATTTTGGAAAATATGCACCAAATGGAACAATTACTAATTTTGTTCCTGGAAAAGATTTAAATGCAACCGCTCAACA
AATTTTTACTTGGCTTAAAGAAGACAATTACTTAACAAATTCAAAAGATCTTAACGATTTTGCAAAGAACTTAGCCGAAT
TTGCTAGAAACCTAAATGCTTTGCACCCCTTTAGAGAAGGTAACGGCAGAACTCAAAGAATATTTTTAAATGAATTGGCT
AAAAATGCAGGTTATAAACTTGATTTAAATTTAATACCAAAAGATAAAATGATAATGGCATCTGTAGAAGCTTCACAATT
GAAATTAGGAAAACTTGAAGCCATAATAAAAACAAATCTAAAAAGCTTTAAGCAAAATTTAGAAAAAGAAAATACATTAG
GCTTATCCCTATGTTAA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9528.86 Da        Isoelectric Point: 4.5686

>AT70529 WP_086257349.1 NZ_CP018792:19977-20225 [Campylobacter sp. RM8964]
MTYPEVHSLEESLAILKKYKDDVNKEDYEGIKSVISNHAIESIYMNELDIIAMIKQSALKLSADEIIAEYKEKGFVEYER
KQ

Download         Length: 249 bp

>AT70529 NZ_CP018792:19977-20225 [Campylobacter sp. RM8964]
ATGACATATCCAGAAGTGCATAGTTTAGAAGAAAGTTTAGCAATACTTAAAAAATATAAAGATGATGTAAATAAGGAAGA
TTATGAAGGTATAAAATCTGTTATAAGTAATCATGCGATAGAGAGTATTTACATGAATGAATTAGATATTATCGCTATGA
TAAAACAAAGTGCTTTAAAGTTAAGTGCTGATGAAATCATTGCTGAATATAAGGAAAAGGGATTTGTAGAATATGAAAGA
AAACAATGA

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References