MGE detailed information
MGE type: Mobilizable plasmid MGE length: 38746 bp
Accession: NZ_CP018473 Location: 1..38746 Organism: Xanthomonas perforans strain LH3 Replicon: plasmid pLH3.4
Accession: NZ_CP018473 Location: 1..38746 Organism: Xanthomonas perforans strain LH3 Replicon: plasmid pLH3.4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD13_RS01040 () | 519..1151 | + | 633 | WP_007966093.1 | ParA family protein | - |
| BJD13_RS01045 () | 1144..1473 | + | 330 | WP_011997475.1 | hypothetical protein | - |
| BJD13_RS01050 () | 1557..1871 | + | 315 | WP_011997474.1 | hypothetical protein | - |
| BJD13_RS01055 () | 2070..3452 | + | 1383 | WP_061070724.1 | hypothetical protein | - |
| BJD13_RS24510 () | 3774..3938 | - | 165 | WP_155767282.1 | hypothetical protein | - |
| BJD13_RS01065 () | 4318..5209 | + | 892 | Protein_6 | DNA-binding protein | - |
| BJD13_RS01070 () | 5364..5846 | - | 483 | WP_155767283.1 | conjugal transfer protein TraK | - |
| BJD13_RS01075 () | 6211..6588 | + | 378 | WP_074053059.1 | conjugal transfer transcriptional regulator TraJ | - |
| BJD13_RS01080 () | 6585..8483 | + | 1899 | WP_155767284.1 | Protein TraI | Relaxase |
| BJD13_RS01085 () | 8656..9441 | + | 786 | WP_061070720.1 | P-type conjugative transfer protein TrbJ | - |
| BJD13_RS01090 () | 9457..9723 | + | 267 | WP_061070719.1 | entry exclusion lipoprotein TrbK | - |
| BJD13_RS01095 () | 9720..11380 | + | 1661 | Protein_12 | P-type conjugative transfer protein TrbL | - |
| BJD13_RS01100 () | 11383..11640 | + | 258 | WP_061070727.1 | hypothetical protein | - |
| BJD13_RS01105 () | 11704..11937 | + | 234 | WP_011997484.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| BJD13_RS01110 () | 12093..12467 | - | 375 | WP_061070726.1 | hypothetical protein | - |
| BJD13_RS24895 () | 12464..12634 | - | 171 | WP_167370944.1 | hypothetical protein | - |
| BJD13_RS01115 () | 12634..12927 | - | 294 | WP_054471487.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BJD13_RS01120 () | 12915..13187 | - | 273 | WP_054471486.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| BJD13_RS01130 () | 13453..14634 | + | 1182 | Protein_19 | transposase family protein | - |
| BJD13_RS01140 () | 14697..15461 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| BJD13_RS01145 () | 15527..16012 | - | 486 | WP_046941321.1 | carboxymuconolactone decarboxylase family protein | - |
| BJD13_RS01150 () | 16236..16685 | + | 450 | Protein_22 | IS1380 family transposase ISMex4 | Transposase |
| BJD13_RS24100 () | 16677..16951 | - | 275 | Protein_23 | IS1380 family transposase ISMex4 | Transposase |
| BJD13_RS01160 () | 16979..17512 | - | 534 | WP_003830783.1 | carboxymuconolactone decarboxylase family protein | - |
| BJD13_RS01165 () | 17630..18472 | + | 843 | WP_074053060.1 | AraC family transcriptional regulator | - |
| BJD13_RS01175 () | 18901..19806 | + | 906 | WP_061070725.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BJD13_RS01180 () | 19892..20524 | + | 633 | WP_007966093.1 | ParA family protein | - |
| BJD13_RS01185 () | 20517..20846 | + | 330 | WP_011997475.1 | hypothetical protein | - |
| BJD13_RS01190 () | 20930..21244 | + | 315 | WP_011997474.1 | hypothetical protein | - |
| BJD13_RS01195 () | 21443..22825 | + | 1383 | WP_061070724.1 | hypothetical protein | - |
| BJD13_RS01200 () | 23060..23368 | + | 309 | WP_074053061.1 | hypothetical protein | - |
| BJD13_RS01205 () | 23662..24582 | + | 921 | WP_061070723.1 | Chromosome partition protein Smc | VF |
| BJD13_RS01210 () | 24801..25220 | - | 420 | WP_061070722.1 | hypothetical protein | - |
| BJD13_RS01215 () | 25585..25962 | + | 378 | WP_074053059.1 | conjugal transfer transcriptional regulator TraJ | - |
| BJD13_RS01220 () | 25959..27787 | + | 1829 | Protein_35 | Protein TraI | Relaxase |
| BJD13_RS01225 () | 28030..28815 | + | 786 | Protein_36 | P-type conjugative transfer protein TrbJ | - |
| BJD13_RS01230 () | 28831..29097 | + | 267 | WP_061070719.1 | entry exclusion lipoprotein TrbK | - |
| BJD13_RS01235 () | 29094..30757 | + | 1664 | Protein_38 | P-type conjugative transfer protein TrbL | - |
| BJD13_RS01240 () | 30760..31017 | + | 258 | WP_061070727.1 | hypothetical protein | - |
| BJD13_RS01245 () | 31081..31314 | + | 234 | WP_011997484.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| BJD13_RS01250 () | 31470..31844 | - | 375 | WP_061070726.1 | hypothetical protein | - |
| BJD13_RS01255 () | 32012..32304 | - | 293 | Protein_42 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BJD13_RS01260 () | 32292..32564 | - | 273 | WP_054471486.1 | CopG family ribbon-helix-helix protein | - |
| BJD13_RS01270 () | 32829..34008 | + | 1180 | Protein_44 | transposase family protein | - |
| BJD13_RS01280 () | 34071..34835 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| BJD13_RS01285 () | 34901..35386 | - | 486 | WP_046941321.1 | carboxymuconolactone decarboxylase family protein | - |
| BJD13_RS01290 () | 35609..36058 | + | 450 | Protein_47 | IS1380 family transposase ISMex4 | Transposase |
| BJD13_RS24105 () | 36050..36324 | - | 275 | Protein_48 | IS1380 family transposase ISMex4 | Transposase |
| BJD13_RS01300 () | 36321..36885 | - | 565 | Protein_49 | carboxymuconolactone decarboxylase family protein | - |
| BJD13_RS01305 () | 37003..37845 | + | 843 | WP_074053060.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|