MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 179490 bp
Accession: NZ_CP018464 Location: 1..179490 Organism: Xanthomonas euvesicatoria strain LMG930 Replicon: plasmid pLMG930.1
Accession: NZ_CP018464 Location: 1..179490 Organism: Xanthomonas euvesicatoria strain LMG930 Replicon: plasmid pLMG930.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD11_RS00895 () | 353..2824 | + | 2472 | WP_074038308.1 | DNA topoisomerase III | - |
| BJD11_RS00900 () | 2834..5272 | + | 2439 | WP_074038310.1 | ATP-binding protein | - |
| BJD11_RS00905 () | 5269..5646 | + | 378 | WP_074038312.1 | lipoprotein | - |
| BJD11_RS00910 () | 5657..6037 | + | 381 | WP_074038314.1 | hypothetical protein | - |
| BJD11_RS00915 () | 6102..6569 | + | 468 | WP_074038316.1 | hypothetical protein | - |
| BJD11_RS00920 () | 6569..6856 | + | 288 | WP_011875781.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BJD11_RS00925 () | 6886..7269 | + | 384 | WP_074038420.1 | hypothetical protein | - |
| BJD11_RS00930 () | 7271..7474 | + | 204 | WP_074038319.1 | hypothetical protein | - |
| BJD11_RS00935 () | 7471..7725 | + | 255 | WP_074038322.1 | hypothetical protein | - |
| BJD11_RS00940 () | 7738..9273 | + | 1536 | WP_074038324.1 | zeta toxin family protein | - |
| BJD11_RS00945 () | 9411..14981 | + | 5571 | WP_074038327.1 | DEAD/DEAH box helicase family protein | - |
| BJD11_RS00950 () | 15747..16049 | + | 303 | WP_005923977.1 | IS66 family transposase ISDpr4 | Transposase |
| BJD11_RS00955 () | 16043..16235 | + | 193 | Protein_13 | IS66 family transposase ISAzo15 | Transposase |
| BJD11_RS25470 () | 16504..16704 | + | 201 | WP_005934416.1 | IS66 family transposase ISAzo15 | Transposase |
| BJD11_RS00965 () | 16825..17235 | - | 411 | WP_074038328.1 | type III effector | - |
| BJD11_RS00985 () | 18725..19657 | + | 933 | Protein_17 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| BJD11_RS00990 () | 19702..22665 | + | 2964 | WP_011345703.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| BJD11_RS00995 () | 22995..24221 | - | 1227 | WP_011345704.1 | replication protein | - |
| BJD11_RS01000 () | 24501..25688 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| BJD11_RS01005 () | 25695..25958 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| BJD11_RS01010 () | 25983..26384 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BJD11_RS01015 () | 26381..26641 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BJD11_RS01020 () | 26831..27397 | + | 567 | WP_011345705.1 | Tn3 family transposase ISPsy42 | Transposase |
| BJD11_RS01025 () | 27669..29006 | - | 1338 | WP_011037255.1 | avirulence protein | - |
| BJD11_RS26260 () | 29097..30167 | - | 1071 | WP_011345706.1 | tyrosine phosphatase | - |
| BJD11_RS01035 () | 30443..30865 | - | 423 | Protein_27 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| BJD11_RS01045 () | 31208..32265 | + | 1058 | WP_087944895.1 | IS3 family transposase ISXac2 | Transposase |
| BJD11_RS01050 () | 32270..33193 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| BJD11_RS01055 () | 33408..33647 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| BJD11_RS01060 () | 33647..34066 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BJD11_RS01065 () | 34071..37046 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BJD11_RS01070 () | 37065..37763 | + | 699 | WP_005918428.1 | UPF0149 family protein | - |
| BJD11_RS01075 () | 37771..38967 | - | 1197 | WP_074038329.1 | AAA family ATPase | - |
| BJD11_RS01080 () | 39417..39863 | - | 447 | WP_129111534.1 | hypothetical protein | - |
| BJD11_RS01085 () | 39957..40325 | - | 369 | Protein_36 | hypothetical protein | - |
| BJD11_RS01090 () | 40550..40948 | - | 399 | WP_074038331.1 | DNA-binding protein | - |
| BJD11_RS01095 () | 41174..41620 | + | 447 | WP_074038333.1 | hypothetical protein | - |
| BJD11_RS01100 () | 41658..42704 | - | 1047 | WP_074038336.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| BJD11_RS01105 () | 42768..43115 | - | 348 | WP_019186249.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BJD11_RS01110 () | 43147..44370 | - | 1224 | WP_074038338.1 | MFS transporter | - |
| BJD11_RS01115 () | 44401..44820 | - | 420 | WP_074038341.1 | arsenate reductase (glutaredoxin) | - |
| BJD11_RS01120 () | 44817..45557 | - | 741 | WP_074038344.1 | arsenical resistance protein ArsH | - |
| BJD11_RS01125 () | 45599..45913 | + | 315 | WP_012480201.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BJD11_RS01130 () | 45940..46431 | + | 492 | WP_074038347.1 | arsenate reductase ArsC | - |
| BJD11_RS01135 () | 46452..47510 | + | 1059 | WP_012480203.1 | ACR3 family arsenite efflux transporter | - |
| BJD11_RS01140 () | 47514..48500 | + | 987 | WP_074038350.1 | thioredoxin-disulfide reductase | - |
| BJD11_RS01145 () | 48525..49598 | + | 1074 | WP_026070021.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| BJD11_RS01150 () | 49849..50220 | + | 372 | WP_037553621.1 | helix-turn-helix domain-containing protein | - |
| BJD11_RS01155 () | 50297..51349 | + | 1053 | WP_037553611.1 | PstS family phosphate ABC transporter substrate-binding protein | - |
| BJD11_RS01160 () | 51400..52344 | + | 945 | WP_187299806.1 | phosphate ABC transporter permease subunit PstC | - |
| BJD11_RS01165 () | 52344..53273 | + | 930 | WP_082332067.1 | phosphate ABC transporter permease PstA | - |
| BJD11_RS01170 () | 53288..54115 | + | 828 | WP_074038423.1 | Phosphate import ATP-binding protein PstB | VF |
| BJD11_RS01175 () | 54128..54853 | + | 726 | WP_019184709.1 | phosphate signaling complex protein PhoU | - |
| BJD11_RS01180 () | 55007..55558 | + | 552 | WP_026070026.1 | 3'-5' exoribonuclease | - |
| BJD11_RS01190 () | 55772..56398 | - | 627 | WP_019184711.1 | SEC-C domain-containing protein | - |
| BJD11_RS01195 () | 56444..57481 | - | 1038 | WP_087947517.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| BJD11_RS01205 () | 58845..59174 | + | 330 | WP_074038356.1 | YegP family protein | - |
| BJD11_RS25480 () | 59317..59673 | + | 357 | WP_129111535.1 | hypothetical protein | - |
| BJD11_RS01210 () | 59844..60785 | - | 942 | WP_049401588.1 | SseB family protein | - |
| BJD11_RS01215 () | 60788..61060 | - | 273 | WP_019184714.1 | hypothetical protein | - |
| BJD11_RS01220 () | 61376..61636 | + | 261 | WP_074038359.1 | cation transporter | - |
| BJD11_RS01225 () | 61774..62169 | + | 396 | WP_019184716.1 | hypothetical protein | - |
| BJD11_RS01230 () | 62243..63547 | + | 1305 | WP_026070027.1 | TolC family protein | - |
| BJD11_RS01235 () | 63544..65058 | + | 1515 | WP_019184718.1 | efflux RND transporter periplasmic adaptor subunit | - |
| BJD11_RS01240 () | 65055..68195 | + | 3141 | WP_019184719.1 | efflux RND transporter permease subunit | - |
| BJD11_RS01245 () | 68300..69130 | - | 831 | WP_026070028.1 | DUF4198 domain-containing protein | - |
| BJD11_RS01250 () | 69157..69546 | - | 390 | WP_074038360.1 | TonB-dependent receptor | - |
| BJD11_RS01255 () | 69515..69721 | + | 207 | WP_005413410.1 | arginase family protein | - |
| BJD11_RS01260 () | 69751..70302 | - | 552 | WP_005995733.1 | DUF305 domain-containing protein | - |
| BJD11_RS01265 () | 70377..70652 | - | 276 | WP_005413412.1 | hypothetical protein | - |
| BJD11_RS01270 () | 70681..72765 | - | 2085 | WP_072167015.1 | copper-translocating P-type ATPase | - |
| BJD11_RS01275 () | 73064..73993 | - | 930 | WP_017354978.1 | copper homeostasis membrane protein CopD | - |
| BJD11_RS01280 () | 74004..74387 | - | 384 | WP_074038361.1 | copper homeostasis periplasmic binding protein CopC | - |
| BJD11_RS01285 () | 74566..74916 | - | 351 | WP_012480213.1 | four-helix bundle copper-binding protein | - |
| BJD11_RS01290 () | 74987..75352 | - | 366 | WP_074038362.1 | DUF411 domain-containing protein | - |
| BJD11_RS01295 () | 75526..76080 | - | 555 | WP_005995720.1 | nuclear transport factor 2 family protein | - |
| BJD11_RS01300 () | 76055..76807 | - | 753 | WP_074038425.1 | cytochrome c | - |
| BJD11_RS01305 () | 76838..77959 | - | 1122 | WP_074038363.1 | copper resistance protein B | - |
| BJD11_RS01310 () | 77956..79824 | - | 1869 | WP_012480217.1 | copper resistance system multicopper oxidase | - |
| BJD11_RS01315 () | 79938..80357 | - | 420 | WP_012480218.1 | transcriptional regulator CopL | - |
| BJD11_RS01320 () | 80532..80852 | - | 321 | WP_024957405.1 | helix-turn-helix domain-containing protein | - |
| BJD11_RS01325 () | 81030..81770 | + | 741 | WP_019184732.1 | hypothetical protein | - |
| BJD11_RS01330 () | 81791..82822 | - | 1032 | WP_099524538.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| BJD11_RS01335 () | 83089..84669 | + | 1581 | WP_026070029.1 | AAA family ATPase | - |
| BJD11_RS01340 () | 84647..85744 | + | 1098 | WP_012480224.1 | AAA family ATPase | - |
| BJD11_RS01345 () | 85760..86035 | - | 276 | WP_019184735.1 | hypothetical protein | - |
| BJD11_RS01350 () | 86032..89223 | - | 3192 | WP_019184736.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| BJD11_RS01355 () | 89232..90182 | - | 951 | WP_074038364.1 | efflux RND transporter periplasmic adaptor subunit | - |
| BJD11_RS01360 () | 90179..91456 | - | 1278 | WP_012480227.1 | TolC family protein | - |
| BJD11_RS01365 () | 91512..91868 | - | 357 | WP_012480228.1 | hypothetical protein | - |
| BJD11_RS01370 () | 91865..92482 | - | 618 | WP_005413376.1 | cation diffusion facilitator family transporter | - |
| BJD11_RS01375 () | 92507..94465 | - | 1959 | WP_021201907.1 | FTR1 family protein | - |
| BJD11_RS01380 () | 94556..94969 | + | 414 | WP_012480230.1 | helix-turn-helix domain-containing protein | - |
| BJD11_RS01385 () | 94966..96237 | + | 1272 | WP_005413373.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| BJD11_RS01390 () | 96262..99255 | + | 2994 | WP_074038365.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| BJD11_RS01395 () | 99529..101274 | - | 1746 | WP_049421089.1 | DUF4209 domain-containing protein | - |
| BJD11_RS01400 () | 101564..101980 | - | 417 | WP_074038366.1 | hypothetical protein | - |
| BJD11_RS01405 () | 101977..102498 | - | 522 | WP_074038367.1 | hypothetical protein | - |
| BJD11_RS01410 () | 102605..103525 | - | 921 | WP_049421086.1 | DNA-binding protein | - |
| BJD11_RS01415 () | 103633..104712 | + | 1080 | WP_074038368.1 | tyrosine-type recombinase/integrase | - |
| BJD11_RS01420 () | 104720..105403 | - | 684 | WP_074038426.1 | adenylate/guanylate cyclase domain-containing protein | - |
| BJD11_RS01425 () | 105424..106343 | - | 920 | Protein_103 | nucleotide-binding protein | - |
| BJD11_RS01430 () | 106480..108012 | + | 1533 | WP_074038369.1 | transcriptional regulator | - |
| BJD11_RS01435 () | 108832..109356 | + | 525 | WP_074038370.1 | hypothetical protein | - |
| BJD11_RS01445 () | 110460..110696 | + | 237 | WP_129111536.1 | hypothetical protein | - |
| BJD11_RS01450 () | 110789..111802 | - | 1014 | WP_074038373.1 | ATP-binding protein | - |
| BJD11_RS01455 () | 111810..113084 | - | 1275 | WP_129111537.1 | hypothetical protein | - |
| BJD11_RS01460 () | 113731..114393 | - | 663 | WP_099523784.1 | hypothetical protein | - |
| BJD11_RS01475 () | 114911..115914 | + | 1004 | Protein_110 | IS3 family transposase ISXac3 | Transposase |
| BJD11_RS01490 () | 115980..117136 | + | 1157 | WP_087944892.1 | IS3 family transposase ISXc8 | Transposase |
| BJD11_RS01495 () | 117394..117891 | + | 498 | WP_074038379.1 | 3'-5' exoribonuclease | - |
| BJD11_RS01500 () | 118235..118498 | + | 264 | WP_074038380.1 | DUF1778 domain-containing protein | - |
| BJD11_RS01505 () | 118502..118990 | + | 489 | WP_029819460.1 | GNAT family N-acetyltransferase | - |
| BJD11_RS01510 () | 118983..121139 | + | 2157 | WP_081711094.1 | site-specific DNA-methyltransferase | - |
| BJD11_RS01515 () | 121143..123737 | + | 2595 | WP_074038381.1 | DEAD/DEAH box helicase family protein | - |
| BJD11_RS01525 () | 123829..124961 | + | 1133 | WP_087942069.1 | IS3 family transposase IS476 | Transposase |
| BJD11_RS01530 () | 125038..126450 | + | 1413 | WP_029819457.1 | SIR2 family protein | - |
| BJD11_RS01535 () | 126447..128057 | + | 1611 | Protein_119 | DUF87 domain-containing protein | - |
| BJD11_RS01540 () | 128074..129450 | - | 1377 | WP_011347842.1 | IS5 family transposase ISXca5 | Transposase |
| BJD11_RS01545 () | 129569..130126 | + | 558 | Protein_121 | ATP-binding protein | - |
| BJD11_RS01550 () | 130490..130843 | - | 354 | WP_033480603.1 | hypothetical protein | - |
| BJD11_RS01555 () | 130894..131739 | - | 846 | WP_074038382.1 | hypothetical protein | - |
| BJD11_RS01560 () | 131750..132256 | - | 507 | WP_005933813.1 | hypothetical protein | - |
| BJD11_RS01565 () | 132396..134594 | - | 2199 | WP_074038383.1 | DotA/TraY family protein | - |
| BJD11_RS01570 () | 134591..135184 | - | 594 | WP_033480599.1 | hypothetical protein | - |
| BJD11_RS01575 () | 135184..136404 | - | 1221 | WP_074038384.1 | conjugal transfer protein TraW | - |
| BJD11_RS01580 () | 136401..139466 | - | 3066 | WP_074038385.1 | hypothetical protein | VF |
| BJD11_RS01585 () | 139478..140230 | - | 753 | WP_074038386.1 | HNH endonuclease | - |
| BJD11_RS01590 () | 140280..140750 | - | 471 | WP_074038387.1 | hypothetical protein | - |
| BJD11_RS01595 () | 140775..141308 | - | 534 | WP_074038388.1 | conjugal transfer protein TraQ | - |
| BJD11_RS01600 () | 141321..142184 | - | 864 | WP_074038389.1 | hypothetical protein | - |
| BJD11_RS01605 () | 142222..143553 | - | 1332 | WP_074038390.1 | conjugal transfer protein TraO | - |
| BJD11_RS01610 () | 143565..144719 | - | 1155 | WP_074038391.1 | hypothetical protein | VF |
| BJD11_RS01615 () | 144731..145504 | - | 774 | WP_074038392.1 | hypothetical protein | VF |
| BJD11_RS01620 () | 146776..147696 | + | 921 | Protein_136 | hypothetical protein | - |
| BJD11_RS01625 () | 148027..148950 | + | 924 | WP_074038393.1 | replication initiator protein A | - |
| BJD11_RS01640 () | 151085..151396 | + | 312 | WP_074038395.1 | hypothetical protein | - |
| BJD11_RS01645 () | 151637..151849 | + | 213 | WP_074038396.1 | hypothetical protein | - |
| BJD11_RS01650 () | 151900..152538 | + | 639 | WP_074038397.1 | ParA family protein | - |
| BJD11_RS01655 () | 152535..152792 | + | 258 | WP_074038398.1 | hypothetical protein | - |
| BJD11_RS01660 () | 152845..153129 | + | 285 | WP_074038399.1 | hypothetical protein | - |
| BJD11_RS01665 () | 153610..153807 | + | 198 | WP_074038400.1 | hypothetical protein | - |
| BJD11_RS01670 () | 153804..154718 | + | 915 | WP_074038401.1 | DNA cytosine methyltransferase | - |
| BJD11_RS01675 () | 154807..155817 | + | 1011 | WP_074038402.1 | DNA-binding protein | - |
| BJD11_RS01680 () | 155887..156192 | + | 306 | WP_074038403.1 | DNA-binding protein Bv3F | VF |
| BJD11_RS01685 () | 156204..157176 | + | 973 | Protein_148 | hypothetical protein | - |
| BJD11_RS01690 () | 157183..157848 | - | 666 | WP_074038404.1 | hypothetical protein | - |
| BJD11_RS01695 () | 157841..158521 | - | 681 | WP_074038405.1 | protein mobD | - |
| BJD11_RS01700 () | 158535..158972 | - | 438 | WP_074038406.1 | hypothetical protein | - |
| BJD11_RS01705 () | 159221..159520 | + | 300 | WP_074038407.1 | mobilization protein | - |
| BJD11_RS01710 () | 159581..161740 | + | 2160 | WP_074038427.1 | Protein TraI | Relaxase |
| BJD11_RS01715 () | 161809..162264 | + | 456 | WP_074038408.1 | DotD/TraH family lipoprotein | - |
| BJD11_RS01720 () | 162279..163304 | + | 1026 | WP_074038409.1 | hypothetical protein | VF |
| BJD11_RS01725 () | 163301..164464 | + | 1164 | WP_074038410.1 | Twitching mobility protein | VF |
| BJD11_RS01730 () | 164461..164730 | + | 270 | WP_074038411.1 | hypothetical protein | VF |
| BJD11_RS01735 () | 164741..164971 | + | 231 | WP_074038412.1 | hypothetical protein | - |
| BJD11_RS01740 () | 165111..165599 | - | 489 | WP_074038413.1 | hypothetical protein | - |
| BJD11_RS01745 () | 165636..168122 | - | 2487 | WP_074038414.1 | hypothetical protein | - |
| BJD11_RS01750 () | 168332..168871 | + | 540 | WP_074038415.1 | hypothetical protein | - |
| BJD11_RS01755 () | 169035..169553 | + | 519 | WP_074038428.1 | hypothetical protein | - |
| BJD11_RS01760 () | 170004..171380 | + | 1377 | WP_011347842.1 | IS5 family transposase ISXca5 | Transposase |
| BJD11_RS01765 () | 171570..172934 | - | 1365 | WP_074038416.1 | hypothetical protein | - |
| BJD11_RS01770 () | 172946..175162 | - | 2217 | WP_074038417.1 | hypothetical protein | VF |
| BJD11_RS25495 () | 175134..175811 | - | 678 | WP_129111540.1 | hypothetical protein | - |
| BJD11_RS01775 () | 175867..177147 | - | 1281 | WP_074038429.1 | DNA primase | - |
| BJD11_RS01780 () | 177156..178103 | - | 948 | WP_074038418.1 | DsbC family protein | - |
| BJD11_RS01785 () | 178107..179234 | - | 1128 | WP_074038419.1 | conjugal transfer protein TrbA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|