MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 21068 bp
Accession: NZ_CP018406 Location: 3977309..3998376 Organism: Burkholderia pseudomallei strain 2013833055 Replicon: chromosome
Accession: NZ_CP018406 Location: 3977309..3998376 Organism: Burkholderia pseudomallei strain 2013833055 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BOC54_RS20680 () | 3972320..3973234 | - | 915 | WP_004527778.1 | A24 family peptidase | - |
| BOC54_RS20685 () | 3973279..3974496 | - | 1218 | WP_004527777.1 | type II secretion system F family protein | - |
| BOC54_RS20690 () | 3974493..3975716 | - | 1224 | WP_009967144.1 | Flp pilus assembly complex ATPase component TadA | - |
| BOC54_RS20695 () | 3975852..3977147 | - | 1296 | WP_004194395.1 | HlyC/CorC family transporter | - |
| BOC54_RS20700 () | 3977435..3978532 | + | 1098 | WP_085507730.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BOC54_RS20705 () | 3978569..3979231 | - | 663 | WP_085507732.1 | hypothetical protein | - |
| BOC54_RS20710 () | 3979303..3980820 | - | 1518 | WP_085507733.1 | hypothetical protein | - |
| BOC54_RS20715 () | 3981087..3982454 | + | 1368 | WP_085507735.1 | ATP-binding protein | - |
| BOC54_RS20720 () | 3983064..3985028 | + | 1965 | WP_085507736.1 | AAA family ATPase | - |
| BOC54_RS20725 () | 3985562..3986740 | - | 1179 | WP_085507738.1 | DUF3396 domain-containing protein | - |
| BOC54_RS20730 () | 3986750..3987478 | - | 729 | WP_085507740.1 | VRR-NUC domain-containing protein | - |
| BOC54_RS20735 () | 3987475..3987996 | - | 522 | WP_085507742.1 | PAAR domain-containing protein | - |
| BOC54_RS20740 () | 3988110..3988367 | - | 258 | WP_085507743.1 | hypothetical protein | - |
| BOC54_RS20745 () | 3988824..3989126 | + | 303 | WP_157131343.1 | mobilization protein | - |
| BOC54_RS20750 () | 3989132..3991138 | + | 2007 | WP_085507862.1 | relaxase/mobilization nuclease domain-containing protein | - |
| BOC54_RS20755 () | 3991241..3991519 | + | 279 | WP_038776176.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| BOC54_RS20760 () | 3991507..3991803 | + | 297 | WP_085507747.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BOC54_RS20765 () | 3991806..3992120 | + | 315 | WP_085507749.1 | hypothetical protein | - |
| BOC54_RS20770 () | 3992393..3992572 | + | 180 | WP_085507751.1 | hypothetical protein | - |
| BOC54_RS38890 () | 3992673..3993332 | + | 660 | WP_129112148.1 | hypothetical protein | - |
| BOC54_RS20775 () | 3993527..3994048 | - | 522 | WP_085507752.1 | hypothetical protein | - |
| BOC54_RS20780 () | 3994058..3996232 | - | 2175 | WP_085507754.1 | DotA/TraY family protein | - |
| BOC54_RS20785 () | 3996229..3996534 | - | 306 | WP_123850029.1 | hypothetical protein | - |
| BOC54_RS20790 () | 3996620..3997528 | - | 909 | WP_085507757.1 | hypothetical protein | - |
| BOC54_RS38895 () | 3997525..3997704 | - | 180 | WP_123850028.1 | hypothetical protein | - |
| BOC54_RS20805 () | 3998448..3999440 | - | 993 | WP_004527775.1 | polyprenyl synthetase family protein | - |
| BOC54_RS20810 () | 3999662..3999973 | + | 312 | WP_004194344.1 | 50S ribosomal protein L21 | - |
| BOC54_RS20815 () | 4000002..4000265 | + | 264 | WP_004194025.1 | 50S ribosomal protein L27 | - |
| BOC54_RS20820 () | 4000450..4001568 | + | 1119 | WP_004194312.1 | GTPase ObgE | - |
| BOC54_RS20825 () | 4001653..4002771 | + | 1119 | WP_004194262.1 | glutamate 5-kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|