MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 54491 bp
Accession: NZ_CP018352 Location: 5054357..5108847 Organism: Klebsiella pneumoniae strain CAV1417 Replicon: chromosome
Accession: NZ_CP018352 Location: 5054357..5108847 Organism: Klebsiella pneumoniae strain CAV1417 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AGG42_RS27785 () | 5049866..5050516 | - | 651 | WP_002913007.1 | transcriptional regulator RcsB | - |
| AGG42_RS27790 () | 5050532..5053189 | - | 2658 | WP_002913006.1 | phosphotransferase RcsD | - |
| AGG42_RS27795 () | 5053961..5054293 | + | 333 | Protein_4908 | porin OmpK36 | - |
| AGG42_RS27800 () | 5054357..5055061 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AGG42_RS27810 () | 5055120..5055326 | + | 207 | Protein_4910 | dihydrofolate reductase | - |
| AGG42_RS27815 () | 5055510..5055857 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| AGG42_RS27820 () | 5055851..5056690 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| AGG42_RS27830 () | 5056818..5057318 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| AGG42_RS30140 () | 5057639..5057707 | + | 69 | Protein_4914 | EAL domain-containing protein | - |
| AGG42_RS27840 () | 5057825..5058589 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| AGG42_RS30145 () | 5058729..5058794 | - | 66 | Protein_4916 | EAL domain-containing protein | - |
| AGG42_RS27855 () | 5058850..5060064 | + | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| AGG42_RS27860 () | 5060098..5061501 | - | 1404 | WP_197685608.1 | DNA cytosine methyltransferase | - |
| AGG42_RS27865 () | 5061630..5061902 | + | 273 | Protein_4919 | IS1 family transposase IS1X2 | Transposase |
| AGG42_RS27870 () | 5061913..5062119 | - | 207 | WP_001749967.1 | hypothetical protein | - |
| AGG42_RS27875 () | 5062124..5062612 | - | 489 | WP_104022057.1 | restriction endonuclease | - |
| AGG42_RS27880 () | 5062821..5063132 | - | 312 | WP_001452736.1 | hypothetical protein | - |
| AGG42_RS27885 () | 5063168..5063482 | - | 315 | WP_001749965.1 | KikA protein | - |
| AGG42_RS27890 () | 5063479..5063823 | - | 345 | WP_001749964.1 | hypothetical protein | - |
| AGG42_RS27895 () | 5063839..5064189 | - | 351 | WP_024129965.1 | H-NS histone family protein | - |
| AGG42_RS27900 () | 5064253..5064987 | + | 735 | WP_001749963.1 | Type IV secretion system protein virB1 | VF |
| AGG42_RS27905 () | 5064996..5065277 | + | 282 | WP_000440698.1 | hypothetical protein | - |
| AGG42_RS27910 () | 5065287..5065580 | + | 294 | WP_001749962.1 | hypothetical protein | - |
| AGG42_RS27915 () | 5065630..5065947 | + | 318 | WP_000496058.1 | hypothetical protein | VF |
| AGG42_RS27920 () | 5065947..5067062 | + | 1116 | Protein_4930 | Type IV secretion system protein virB4 | VF |
| AGG42_RS27925 () | 5067117..5067821 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AGG42_RS27930 () | 5068215..5069090 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| AGG42_RS27935 () | 5069137..5069469 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AGG42_RS27940 () | 5069483..5071726 | + | 2244 | Protein_4934 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AGG42_RS27945 () | 5071791..5072495 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AGG42_RS27950 () | 5072550..5073665 | - | 1116 | Protein_4936 | Type IV secretion system protein virB4 | VF |
| AGG42_RS27955 () | 5073665..5073982 | - | 318 | WP_000496058.1 | hypothetical protein | VF |
| AGG42_RS27960 () | 5074032..5074325 | - | 294 | WP_001749962.1 | hypothetical protein | - |
| AGG42_RS27965 () | 5074335..5074616 | - | 282 | WP_000440698.1 | hypothetical protein | - |
| AGG42_RS27970 () | 5074625..5074951 | - | 327 | Protein_4940 | traL protein | - |
| AGG42_RS27975 () | 5075017..5075721 | + | 705 | WP_016162063.1 | IS6 family transposase IS26 | Transposase |
| AGG42_RS28875 () | 5075774..5076229 | - | 456 | Protein_4942 | DNA-binding protein | - |
| AGG42_RS27990 () | 5076263..5076838 | - | 576 | WP_060415435.1 | hypothetical protein | - |
| AGG42_RS27995 () | 5076835..5077071 | - | 237 | WP_060415434.1 | hypothetical protein | - |
| AGG42_RS28000 () | 5077387..5080506 | + | 3120 | WP_064174377.1 | hypothetical protein | - |
| AGG42_RS30150 () | 5080647..5080907 | + | 261 | Protein_4946 | hypothetical protein | - |
| AGG42_RS28010 () | 5081066..5081395 | + | 330 | WP_040214038.1 | hypothetical protein | - |
| AGG42_RS28015 () | 5081429..5081740 | + | 312 | WP_024191724.1 | hypothetical protein | - |
| AGG42_RS28020 () | 5081805..5082809 | + | 1005 | WP_016162067.1 | hypothetical protein | - |
| AGG42_RS30155 () | 5082853..5083014 | + | 162 | WP_032495756.1 | hypothetical protein | - |
| AGG42_RS28025 () | 5083007..5083801 | + | 795 | WP_015632375.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AGG42_RS28030 () | 5084233..5084412 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| AGG42_RS28035 () | 5084532..5085158 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| AGG42_RS28040 () | 5085783..5086658 | - | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| AGG42_RS28045 () | 5087070..5088341 | - | 1272 | WP_016162068.1 | Y-family DNA polymerase | - |
| AGG42_RS28050 () | 5088341..5088772 | - | 432 | WP_015632467.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AGG42_RS28055 () | 5088936..5089421 | - | 486 | Protein_4957 | IS5 family transposase | - |
| AGG42_RS28060 () | 5089553..5089771 | + | 219 | WP_015632465.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AGG42_RS28065 () | 5089771..5090076 | + | 306 | WP_015632464.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AGG42_RS28070 () | 5090221..5090565 | + | 345 | WP_015632463.1 | hypothetical protein | - |
| AGG42_RS28075 () | 5090607..5091173 | + | 567 | WP_015632462.1 | IS1595 family transposase ISNtsp4 | Transposase |
| AGG42_RS28080 () | 5091377..5091634 | - | 258 | WP_016162071.1 | helix-turn-helix domain-containing protein | - |
| AGG42_RS28085 () | 5092064..5092291 | + | 228 | WP_016162072.1 | hypothetical protein | - |
| AGG42_RS28090 () | 5092305..5092427 | + | 123 | Protein_4964 | transcriptional regulator | - |
| AGG42_RS28095 () | 5092633..5093076 | - | 444 | WP_015632459.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AGG42_RS28100 () | 5093102..5093284 | - | 183 | WP_015632458.1 | type II toxin-antitoxin system HicA family toxin | - |
| AGG42_RS28105 () | 5093645..5094625 | + | 981 | WP_015632457.1 | partitioning protein | - |
| AGG42_RS28110 () | 5094618..5095046 | + | 429 | WP_015632456.1 | plasmid partitioning/stability family protein | - |
| AGG42_RS28880 () | 5095199..5095657 | + | 459 | WP_015632455.1 | hypothetical protein | - |
| AGG42_RS28120 () | 5095654..5096142 | + | 489 | WP_015632454.1 | transcriptional regulator | - |
| AGG42_RS28125 () | 5096270..5096707 | + | 438 | WP_015632453.1 | hypothetical protein | - |
| AGG42_RS28130 () | 5097301..5097660 | + | 360 | WP_016162075.1 | hypothetical protein | - |
| AGG42_RS28135 () | 5097804..5097983 | + | 180 | WP_032441934.1 | hypothetical protein | - |
| AGG42_RS28140 () | 5098057..5098917 | + | 861 | WP_015632451.1 | DUF4942 domain-containing protein | - |
| AGG42_RS28145 () | 5099087..5099524 | + | 438 | WP_015632450.1 | antirestriction protein | - |
| AGG42_RS28150 () | 5100216..5100449 | + | 234 | WP_016162076.1 | hypothetical protein | - |
| AGG42_RS28155 () | 5100503..5100823 | + | 321 | WP_015632449.1 | hypothetical protein | - |
| AGG42_RS28160 () | 5101094..5101426 | - | 333 | WP_015632448.1 | hypothetical protein | - |
| AGG42_RS28165 () | 5101822..5102133 | + | 312 | WP_016162079.1 | hypothetical protein | - |
| AGG42_RS28170 () | 5102136..5102828 | + | 693 | WP_104022028.1 | relaxase/mobilization nuclease domain-containing protein | - |
| AGG42_RS28175 () | 5102774..5103478 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AGG42_RS28180 () | 5103541..5104479 | + | 939 | Protein_4982 | IS481 family transposase ISAzs36 | Transposase |
| AGG42_RS28185 () | 5104469..5105437 | + | 969 | WP_020277915.1 | ExeA family protein | - |
| AGG42_RS28190 () | 5105613..5106713 | + | 1101 | Protein_4984 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| AGG42_RS28195 () | 5106899..5107672 | - | 774 | WP_020277917.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| AGG42_RS28200 () | 5107738..5108088 | - | 351 | Protein_4986 | DsbA family protein | - |
| AGG42_RS28205 () | 5108143..5108847 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AGG42_RS28210 () | 5108902..5109687 | + | 786 | Protein_4988 | porin OmpC | - |
| AGG42_RS28215 () | 5109791..5110843 | + | 1053 | WP_004180700.1 | FAD:protein FMN transferase ApbE | - |
| AGG42_RS28220 () | 5110917..5111981 | + | 1065 | WP_002913002.1 | bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada | - |
| AGG42_RS28225 () | 5111981..5112634 | + | 654 | WP_004151113.1 | DNA oxidative demethylase AlkB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|