MGE detailed information
MGE type: Prophage MGE length: 41510 bp
Accession: NZ_CP018034 Location: 573521..615030 Organism: Glaesserella parasuis str. Nagasaki Replicon: chromosome
Accession: NZ_CP018034 Location: 573521..615030 Organism: Glaesserella parasuis str. Nagasaki Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A2U21_RS02950 () | 569769..570860 | + | 1092 | WP_035492395.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| A2U21_RS02955 () | 570862..571506 | + | 645 | WP_010786213.1 | riboflavin synthase | - |
| A2U21_RS02960 () | 571638..572837 | + | 1200 | WP_016527538.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| A2U21_RS02965 () | 572936..573397 | + | 462 | WP_010786211.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| A2U21_RS02970 () | 573521..574312 | - | 792 | WP_016527540.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A2U21_RS02975 () | 574312..575247 | - | 936 | WP_016527541.1 | ABC transporter inner membrane subunit | - |
| A2U21_RS02980 () | 575441..575659 | + | 219 | WP_005712153.1 | YgjV family protein | - |
| A2U21_RS12200 () | 575773..575913 | - | 141 | WP_005712155.1 | hypothetical protein | - |
| A2U21_RS02985 () | 575938..577359 | - | 1422 | WP_021109850.1 | membrane-bound lytic murein transglycosylase MltF | - |
| A2U21_RS02990 () | 577487..578341 | - | 855 | WP_010786207.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| A2U21_RS03005 () | 578744..579799 | - | 1056 | WP_021109851.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A2U21_RS03010 () | 579703..580008 | - | 306 | WP_016527543.1 | helix-turn-helix domain-containing protein | - |
| A2U21_RS03015 () | 580098..580901 | - | 804 | WP_021109852.1 | hypothetical protein | - |
| A2U21_RS03020 () | 581354..581734 | - | 381 | WP_005712166.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| A2U21_RS03025 () | 582100..582312 | + | 213 | WP_005712169.1 | hypothetical protein | - |
| A2U21_RS03030 () | 582331..582594 | - | 264 | WP_005712171.1 | hypothetical protein | - |
| A2U21_RS03035 () | 582618..583337 | - | 720 | WP_021109859.1 | hypothetical protein | - |
| A2U21_RS03040 () | 583681..583869 | + | 189 | WP_010786201.1 | hypothetical protein | - |
| A2U21_RS03045 () | 583911..584525 | - | 615 | WP_021109860.1 | YqaJ viral recombinase family protein | - |
| A2U21_RS03050 () | 584522..585388 | - | 867 | WP_021109861.1 | phage recombination protein Bet | - |
| A2U21_RS12205 () | 585398..586024 | - | 627 | WP_021109862.1 | hypothetical protein | - |
| A2U21_RS03060 () | 586031..587239 | - | 1209 | WP_035498286.1 | IS256 family transposase IS1414 | Transposase |
| A2U21_RS03065 () | 587282..587665 | + | 384 | WP_035494815.1 | antitermination protein | - |
| A2U21_RS03070 () | 587687..588124 | - | 438 | WP_005714900.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| A2U21_RS03075 () | 588154..588339 | - | 186 | WP_005714898.1 | type II toxin-antitoxin system HicA family toxin | - |
| A2U21_RS03080 () | 588580..588855 | + | 276 | WP_012621834.1 | hypothetical protein | - |
| A2U21_RS03085 () | 588830..589375 | + | 546 | WP_020996993.1 | lysozyme | - |
| A2U21_RS03090 () | 589348..589692 | + | 345 | WP_026916566.1 | DUF2570 family protein | - |
| A2U21_RS12210 () | 589586..589870 | + | 285 | WP_187325700.1 | hypothetical protein | - |
| A2U21_RS03100 () | 590186..590653 | + | 468 | WP_005714379.1 | DUF1441 family protein | - |
| A2U21_RS03105 () | 590653..592773 | + | 2121 | WP_005714376.1 | phage terminase large subunit family protein | - |
| A2U21_RS03110 () | 592791..593012 | + | 222 | WP_005714374.1 | hypothetical protein | - |
| A2U21_RS03115 () | 593013..594512 | + | 1500 | WP_005714372.1 | phage portal protein | - |
| A2U21_RS03120 () | 594538..596505 | + | 1968 | WP_005714371.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| A2U21_RS03125 () | 596573..596899 | + | 327 | WP_021109618.1 | DUF2190 family protein | - |
| A2U21_RS03130 () | 596892..597197 | + | 306 | WP_005714563.1 | phage tail protein | - |
| A2U21_RS03135 () | 597201..597734 | + | 534 | WP_005714565.1 | phage tail protein | - |
| A2U21_RS03140 () | 597734..598153 | + | 420 | WP_005714567.1 | phage tail protein | - |
| A2U21_RS03145 () | 598156..598821 | + | 666 | WP_010786321.1 | hypothetical protein | - |
| A2U21_RS03150 () | 598895..599296 | + | 402 | WP_005714571.1 | hypothetical protein | - |
| A2U21_RS03155 () | 599341..599568 | + | 228 | WP_005714573.1 | DUF4035 domain-containing protein | - |
| A2U21_RS03160 () | 599638..599904 | + | 267 | WP_005714576.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| A2U21_RS03165 () | 599908..600177 | + | 270 | WP_005714578.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| A2U21_RS03170 () | 600323..600891 | - | 569 | Protein_583 | IS256 family transposase IS1414 | Transposase |
| A2U21_RS03175 () | 600995..601210 | + | 216 | WP_035498906.1 | hypothetical protein | - |
| A2U21_RS03180 () | 601413..601688 | + | 276 | WP_005714514.1 | hypothetical protein | VF |
| A2U21_RS03185 () | 601744..605118 | + | 3375 | WP_021110225.1 | phage tail tape measure protein | - |
| A2U21_RS03190 () | 605163..605495 | + | 333 | WP_020997028.1 | phage tail protein | - |
| A2U21_RS03195 () | 605495..606232 | + | 738 | WP_021110224.1 | phage minor tail protein L | - |
| A2U21_RS03200 () | 606312..607058 | + | 747 | WP_021110223.1 | tetratricopeptide repeat family protein | - |
| A2U21_RS03205 () | 607058..607438 | + | 381 | WP_005713886.1 | hypothetical protein | - |
| A2U21_RS03210 () | 607482..608243 | + | 762 | WP_005713885.1 | C40 family peptidase | - |
| A2U21_RS03215 () | 608273..608785 | + | 513 | WP_021110222.1 | tail assembly protein | - |
| A2U21_RS03220 () | 608839..612072 | + | 3234 | WP_021110221.1 | putative phage tail protein | - |
| A2U21_RS03225 () | 612035..612913 | + | 879 | WP_020997072.1 | DUF1983 domain-containing protein | - |
| A2U21_RS03230 () | 612942..613733 | + | 792 | WP_005713882.1 | transferrin-binding protein-like solute binding protein | - |
| A2U21_RS03240 () | 614074..615030 | - | 957 | WP_005713881.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| A2U21_RS03245 () | 615168..616535 | - | 1368 | WP_021110220.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
| A2U21_RS03250 () | 617046..619862 | - | 2817 | WP_021110218.1 | isoleucine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|