MGE detailed information
MGE type: Prophage MGE length: 68754 bp
Accession: NZ_CP018032 Location: 1304438..1373191 Organism: Glaesserella parasuis D74 Replicon: chromosome
Accession: NZ_CP018032 Location: 1304438..1373191 Organism: Glaesserella parasuis D74 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A2U20_RS06335 () | 1300955..1302958 | + | 2004 | WP_021116990.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| A2U20_RS06340 () | 1303085..1303855 | - | 771 | WP_021110825.1 | Nif3-like dinuclear metal center hexameric protein | - |
| A2U20_RS06345 () | 1304438..1305409 | - | 972 | WP_021116991.1 | phage portal protein | - |
| A2U20_RS06350 () | 1305417..1307195 | - | 1779 | WP_043895715.1 | terminase family protein | - |
| A2U20_RS06355 () | 1307362..1308195 | + | 834 | WP_021116993.1 | GPO family capsid scaffolding protein | - |
| A2U20_RS06360 () | 1308231..1309277 | + | 1047 | WP_021116994.1 | phage major capsid protein, P2 family | - |
| A2U20_RS06365 () | 1309285..1309947 | + | 663 | WP_021116995.1 | phage small terminase subunit | - |
| A2U20_RS06370 () | 1310064..1310540 | + | 477 | WP_043895716.1 | head completion/stabilization protein | - |
| A2U20_RS06375 () | 1310540..1310746 | + | 207 | WP_021116997.1 | tail protein X | - |
| A2U20_RS06380 () | 1310752..1310973 | + | 222 | WP_043895751.1 | phage holin family protein | - |
| A2U20_RS06385 () | 1310957..1311481 | + | 525 | WP_021118207.1 | lysozyme | - |
| A2U20_RS06390 () | 1311466..1311933 | + | 468 | WP_021110835.1 | hypothetical protein | - |
| A2U20_RS06395 () | 1312116..1312634 | + | 519 | WP_021117000.1 | hypothetical protein | - |
| A2U20_RS06400 () | 1312840..1313058 | + | 219 | WP_010786750.1 | TraR/DksA family transcriptional regulator | - |
| A2U20_RS06405 () | 1313055..1313543 | + | 489 | WP_021117001.1 | phage tail protein | - |
| A2U20_RS06410 () | 1313506..1313961 | + | 456 | WP_021117002.1 | phage virion morphogenesis protein | - |
| A2U20_RS06415 () | 1313991..1314455 | - | 465 | WP_021117003.1 | hypothetical protein | - |
| A2U20_RS06420 () | 1314520..1317342 | + | 2823 | WP_043895752.1 | tail protein | - |
| A2U20_RS06425 () | 1317437..1317634 | + | 198 | WP_021113101.1 | hypothetical protein | - |
| A2U20_RS06430 () | 1317615..1317989 | + | 375 | WP_021110841.1 | hypothetical protein | - |
| A2U20_RS06435 () | 1318103..1318300 | + | 198 | WP_021113085.1 | hypothetical protein | - |
| A2U20_RS06440 () | 1318426..1318998 | + | 573 | WP_021113062.1 | phage baseplate assembly protein V | - |
| A2U20_RS06445 () | 1318998..1319339 | + | 342 | WP_021117005.1 | GPW/gp25 family protein | - |
| A2U20_RS06450 () | 1319336..1320250 | + | 915 | WP_021117006.1 | baseplate assembly protein | - |
| A2U20_RS06455 () | 1320240..1320779 | + | 540 | WP_021117007.1 | phage tail protein I | - |
| A2U20_RS06460 () | 1320788..1323352 | + | 2565 | WP_021117008.1 | phage tail protein | - |
| A2U20_RS06465 () | 1323354..1323911 | + | 558 | WP_021117009.1 | DUF4376 domain-containing protein | - |
| A2U20_RS06470 () | 1323898..1324167 | + | 270 | WP_021113064.1 | hypothetical protein | - |
| A2U20_RS06475 () | 1324271..1325440 | + | 1170 | WP_021117010.1 | phage tail sheath protein | - |
| A2U20_RS06480 () | 1325495..1326004 | + | 510 | WP_021110851.1 | phage major tail tube protein | - |
| A2U20_RS06485 () | 1326056..1326391 | + | 336 | WP_021117011.1 | phage tail assembly protein | - |
| A2U20_RS06490 () | 1326400..1326519 | + | 120 | WP_071610269.1 | GpE family phage tail protein | - |
| A2U20_RS06495 () | 1326595..1327032 | + | 438 | WP_042905886.1 | phage tail protein | - |
| A2U20_RS06500 () | 1327029..1328178 | + | 1150 | Protein_1258 | phage late control D family protein | - |
| A2U20_RS06505 () | 1328415..1328771 | + | 357 | WP_021117016.1 | hypothetical protein | - |
| A2U20_RS06510 () | 1328950..1329402 | - | 453 | WP_021117017.1 | hypothetical protein | - |
| A2U20_RS06515 () | 1329511..1329843 | - | 333 | WP_021117018.1 | hypothetical protein | - |
| A2U20_RS06520 () | 1329867..1330079 | - | 213 | WP_080651874.1 | excalibur calcium-binding domain-containing protein | - |
| A2U20_RS06525 () | 1330182..1330559 | - | 378 | WP_021117020.1 | PH domain-containing protein | - |
| A2U20_RS06530 () | 1330722..1331144 | - | 423 | WP_021117021.1 | helix-turn-helix domain-containing protein | - |
| A2U20_RS06535 () | 1331270..1331464 | + | 195 | WP_021117022.1 | hypothetical protein | - |
| A2U20_RS06540 () | 1331500..1331709 | + | 210 | WP_043895719.1 | hypothetical protein | - |
| A2U20_RS06545 () | 1331679..1331942 | - | 264 | WP_021110862.1 | hypothetical protein | - |
| A2U20_RS06550 () | 1332135..1332407 | + | 273 | WP_021110863.1 | hypothetical protein | - |
| A2U20_RS06555 () | 1332486..1332806 | + | 321 | WP_043895720.1 | hypothetical protein | - |
| A2U20_RS06560 () | 1332915..1333145 | - | 231 | WP_021110865.1 | hypothetical protein | - |
| A2U20_RS06565 () | 1333199..1333513 | + | 315 | WP_021117025.1 | hypothetical protein | - |
| A2U20_RS06570 () | 1333639..1333854 | + | 216 | WP_021117027.1 | hypothetical protein | - |
| A2U20_RS06575 () | 1333829..1336282 | + | 2454 | WP_021117028.1 | replication endonuclease | - |
| A2U20_RS06580 () | 1336269..1336658 | + | 390 | WP_035524151.1 | hypothetical protein | - |
| A2U20_RS06585 () | 1336667..1337155 | + | 489 | WP_021117029.1 | ash family protein | - |
| A2U20_RS06590 () | 1337148..1337474 | + | 327 | WP_021117030.1 | hypothetical protein | - |
| A2U20_RS06595 () | 1337561..1337818 | + | 258 | WP_021110872.1 | AlpA family phage regulatory protein | - |
| A2U20_RS06600 () | 1337856..1339073 | - | 1218 | WP_021110873.1 | Prophage integrase IntA ; Integrase | Integrase |
| A2U20_RS06615 () | 1339519..1340751 | - | 1233 | WP_021110874.1 | molybdopterin molybdotransferase MoeA | - |
| A2U20_RS06620 () | 1340943..1341566 | - | 624 | WP_021110875.1 | MarC family protein | - |
| A2U20_RS06625 () | 1341646..1343559 | + | 1914 | WP_021117031.1 | putative ABC transporter ATP-binding protein | VF |
| A2U20_RS06630 () | 1343684..1344484 | - | 801 | Protein_1282 | IS110 family transposase ISNme5 | Transposase |
| A2U20_RS06635 () | 1344576..1346504 | - | 1929 | WP_021112473.1 | ATP-dependent zinc metalloprotease FtsH | - |
| A2U20_RS06640 () | 1346578..1347204 | - | 627 | WP_021110879.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| A2U20_RS06645 () | 1347517..1348305 | + | 789 | WP_021117032.1 | Enoyl-[acyl-carrier-protein] reductase [NADH] FabI | VF |
| A2U20_RS06650 () | 1348393..1350450 | - | 2058 | WP_021117033.1 | AAA family ATPase | - |
| A2U20_RS06655 () | 1350634..1352574 | - | 1941 | WP_021117034.1 | DUF262 domain-containing protein | - |
| A2U20_RS06660 () | 1352584..1353822 | - | 1239 | WP_021117035.1 | DUF262 domain-containing protein | - |
| A2U20_RS06665 () | 1353856..1354509 | - | 654 | WP_021117036.1 | hypothetical protein | - |
| A2U20_RS06670 () | 1354511..1355620 | - | 1110 | WP_021117037.1 | bacterial transferase hexapeptide family protein | - |
| A2U20_RS06675 () | 1355675..1356514 | - | 840 | WP_021117038.1 | sir2 family protein | - |
| A2U20_RS06680 () | 1356541..1357377 | - | 837 | WP_021117039.1 | sir2 family protein | - |
| A2U20_RS06685 () | 1357455..1358165 | - | 711 | WP_021117040.1 | NAD-dependent protein deacylase | - |
| A2U20_RS06690 () | 1358176..1358919 | - | 744 | WP_021117041.1 | protein phosphatase 2C domain-containing protein | - |
| A2U20_RS06695 () | 1359501..1360463 | - | 963 | WP_021117042.1 | WYL domain-containing protein | - |
| A2U20_RS06700 () | 1360526..1360822 | - | 297 | WP_016527809.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| A2U20_RS06705 () | 1360825..1361169 | - | 345 | WP_005714197.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A2U20_RS06710 () | 1361384..1363363 | + | 1980 | WP_021117043.1 | exoribonuclease II | - |
| A2U20_RS06715 () | 1363474..1364565 | + | 1092 | WP_021109715.1 | murein transglycosylase A | - |
| A2U20_RS06720 () | 1364747..1365343 | - | 597 | WP_021117044.1 | DedA family protein | - |
| A2U20_RS06725 () | 1365354..1366371 | - | 1018 | Protein_1301 | HTH-type transcriptional repressor PurR | - |
| A2U20_RS06730 () | 1366486..1367430 | - | 945 | WP_021117046.1 | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | - |
| A2U20_RS06735 () | 1367517..1368047 | + | 531 | WP_005714346.1 | endonuclease SmrB | - |
| A2U20_RS06740 () | 1368189..1369406 | - | 1218 | WP_021117047.1 | aromatic amino acid transporter | - |
| A2U20_RS06745 () | 1369554..1370768 | - | 1215 | WP_021117048.1 | aromatic amino acid transporter | - |
| A2U20_RS06750 () | 1371103..1371405 | + | 303 | Protein_1306 | IS1595 family transposase ISHps3 | Transposase |
| A2U20_RS12140 () | 1371662..1371976 | - | 315 | Protein_1307 | site-specific integrase | - |
| A2U20_RS06765 () | 1372373..1373191 | - | 819 | WP_005713726.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| A2U20_RS06770 () | 1373201..1374283 | - | 1083 | WP_043895780.1 | lytic murein transglycosylase | - |
| A2U20_RS06775 () | 1374293..1375210 | - | 918 | WP_005713728.1 | tRNA pseudouridine(55) synthase TruB | - |
| A2U20_RS06780 () | 1375213..1375596 | - | 384 | WP_005713730.1 | 30S ribosome-binding factor RbfA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|