MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP017920 Location: 3980790..3985732 Organism: Mycobacterium tuberculosis strain TB282 Replicon: chromosome
Accession: NZ_CP017920 Location: 3980790..3985732 Organism: Mycobacterium tuberculosis strain TB282 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BK419_RS18680 () | 3976696..3977406 | - | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
| BK419_RS18685 () | 3977480..3978352 | + | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| BK419_RS18690 () | 3978423..3980600 | - | 2178 | WP_016330440.1 | PE family protein | - |
| BK419_RS21940 () | 3980790..3982131 | - | 1342 | Protein_3669 | ISNCY family transposase ISMav10 | Transposase |
| BK419_RS18705 () | 3982343..3982618 | + | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BK419_RS18710 () | 3982618..3983010 | + | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BK419_RS18715 () | 3983764..3984429 | + | 666 | Protein_3672 | polyprenyl synthetase family protein | - |
| BK419_RS18730 () | 3985785..3986174 | + | 390 | Protein_3674 | polyprenyl synthetase family protein | - |
| BK419_RS18735 () | 3986174..3987163 | + | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BK419_RS18740 () | 3987160..3988998 | + | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| BK419_RS18745 () | 3989007..3989897 | + | 891 | WP_003417908.1 | diterpene synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |