MGE detailed information
MGE type: Prophage MGE length: 50545 bp
Accession: NZ_CP017886 Location: 4522754..4573298 Organism: Pseudomonas frederiksbergensis strain ERDD5:01 Replicon: chromosome
Accession: NZ_CP017886 Location: 4522754..4573298 Organism: Pseudomonas frederiksbergensis strain ERDD5:01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLL42_RS21610 () | 4517940..4518866 | - | 927 | WP_071554010.1 | allantoinase PuuE | - |
| BLL42_RS21615 () | 4519303..4519656 | + | 354 | WP_071554012.1 | hydroxyisourate hydrolase | - |
| BLL42_RS21620 () | 4519841..4520467 | - | 627 | WP_071554013.1 | LysE family translocator | - |
| BLL42_RS21625 () | 4520533..4521882 | - | 1350 | WP_071554015.1 | NCS2 family permease | - |
| BLL42_RS21630 () | 4522281..4522652 | - | 372 | WP_071554018.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| BLL42_RS21635 () | 4522754..4523299 | - | 546 | WP_071554020.1 | GTP cyclohydrolase I FolE | - |
| BLL42_RS21640 () | 4523322..4524527 | - | 1206 | WP_071554022.1 | Putative defective protein IntQ ; Integrase | Integrase |
| BLL42_RS30260 () | 4524750..4525289 | - | 540 | WP_071554024.1 | hypothetical protein | - |
| BLL42_RS30065 () | 4525341..4525514 | - | 174 | WP_161492351.1 | hypothetical protein | - |
| BLL42_RS21650 () | 4525561..4525890 | - | 330 | WP_071554026.1 | hypothetical protein | - |
| BLL42_RS21655 () | 4525938..4526117 | - | 180 | WP_071554028.1 | hypothetical protein | - |
| BLL42_RS21660 () | 4526114..4526533 | - | 420 | WP_071554030.1 | hypothetical protein | - |
| BLL42_RS21665 () | 4526530..4527153 | - | 624 | WP_071554032.1 | hypothetical protein | - |
| BLL42_RS21670 () | 4527205..4527474 | + | 270 | WP_071554034.1 | hypothetical protein | - |
| BLL42_RS21675 () | 4527572..4527805 | + | 234 | WP_071554035.1 | hypothetical protein | - |
| BLL42_RS21680 () | 4527831..4528136 | + | 306 | WP_129586970.1 | hypothetical protein | - |
| BLL42_RS21685 () | 4528459..4530192 | - | 1734 | WP_071554039.1 | DNA cytosine methyltransferase | - |
| BLL42_RS21690 () | 4530277..4530525 | + | 249 | WP_071554041.1 | hypothetical protein | - |
| BLL42_RS30320 () | 4530610..4530998 | - | 389 | Protein_4221 | hypothetical protein | - |
| BLL42_RS21705 () | 4531100..4531312 | + | 213 | WP_071554046.1 | hypothetical protein | - |
| BLL42_RS21710 () | 4531394..4531606 | + | 213 | WP_129586971.1 | hypothetical protein | - |
| BLL42_RS21715 () | 4531675..4532682 | - | 1008 | WP_071554050.1 | nucleoid-associated protein YejK | - |
| BLL42_RS21725 () | 4533025..4533516 | - | 492 | WP_071554054.1 | hypothetical protein | - |
| BLL42_RS21730 () | 4533604..4534266 | - | 663 | WP_071554056.1 | YqaJ viral recombinase family protein | - |
| BLL42_RS21735 () | 4534266..4535255 | - | 990 | WP_071554058.1 | recombinase RecT | - |
| BLL42_RS21740 () | 4535309..4536430 | - | 1122 | WP_071555815.1 | hypothetical protein | - |
| BLL42_RS21745 () | 4536578..4536811 | - | 234 | WP_071554059.1 | hypothetical protein | - |
| BLL42_RS21750 () | 4536808..4537041 | - | 234 | WP_071554060.1 | hypothetical protein | - |
| BLL42_RS21755 () | 4537047..4537295 | - | 249 | WP_071555816.1 | hypothetical protein | - |
| BLL42_RS21760 () | 4537882..4538661 | - | 780 | WP_071554062.1 | hypothetical protein | - |
| BLL42_RS21765 () | 4538738..4539121 | - | 384 | WP_071554064.1 | Response regulator protein VraR | VF |
| BLL42_RS21770 () | 4539689..4539937 | - | 249 | WP_071554066.1 | DUF1654 domain-containing protein | - |
| BLL42_RS21775 () | 4540089..4540337 | + | 249 | WP_071554068.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BLL42_RS21780 () | 4540337..4540678 | + | 342 | WP_071554070.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BLL42_RS21785 () | 4540789..4541028 | - | 240 | WP_071554072.1 | hypothetical protein | - |
| BLL42_RS29300 () | 4541316..4541504 | + | 189 | WP_081427319.1 | hypothetical protein | - |
| BLL42_RS21795 () | 4541499..4542299 | - | 801 | WP_071554074.1 | helix-turn-helix domain-containing protein | - |
| BLL42_RS21800 () | 4542416..4542613 | + | 198 | WP_071555818.1 | helix-turn-helix domain-containing protein | - |
| BLL42_RS21805 () | 4542769..4543581 | + | 813 | WP_071554075.1 | phage regulatory protein/antirepressor Ant | - |
| BLL42_RS21810 () | 4543578..4543910 | + | 333 | WP_071554076.1 | hypothetical protein | - |
| BLL42_RS21815 () | 4543907..4544695 | + | 789 | WP_081427320.1 | hypothetical protein | - |
| BLL42_RS21820 () | 4544731..4545444 | + | 714 | WP_071555819.1 | Replication protein P | - |
| BLL42_RS21825 () | 4545437..4545655 | + | 219 | WP_071554078.1 | hypothetical protein | - |
| BLL42_RS21830 () | 4545655..4546092 | + | 438 | WP_071554080.1 | hypothetical protein | - |
| BLL42_RS21835 () | 4546085..4546672 | + | 588 | WP_071554082.1 | DUF1367 family protein | - |
| BLL42_RS30070 () | 4546669..4546806 | + | 138 | WP_161492352.1 | hypothetical protein | - |
| BLL42_RS21840 () | 4546803..4547381 | + | 579 | WP_071554084.1 | recombination protein NinG | - |
| BLL42_RS21845 () | 4547378..4547959 | + | 582 | WP_071554086.1 | hypothetical protein | - |
| BLL42_RS21850 () | 4548421..4549143 | + | 723 | WP_071554088.1 | DUF1983 domain-containing protein | - |
| BLL42_RS21855 () | 4549198..4549575 | + | 378 | WP_071554090.1 | hypothetical protein | - |
| BLL42_RS21860 () | 4549575..4549856 | + | 282 | WP_071554092.1 | phage holin family protein | - |
| BLL42_RS21865 () | 4549966..4550307 | - | 342 | WP_071554095.1 | hypothetical protein | - |
| BLL42_RS21870 () | 4550396..4550917 | + | 522 | WP_071554097.1 | hypothetical protein ; Integrase | Integrase |
| BLL42_RS21875 () | 4550919..4552406 | + | 1488 | WP_071554099.1 | terminase | - |
| BLL42_RS21880 () | 4552403..4553818 | + | 1416 | WP_071554101.1 | DUF4055 domain-containing protein | - |
| BLL42_RS21885 () | 4553793..4554878 | + | 1086 | WP_071554103.1 | minor capsid protein | - |
| BLL42_RS21890 () | 4554961..4555689 | + | 729 | WP_071554105.1 | hypothetical protein | - |
| BLL42_RS21895 () | 4555702..4556667 | + | 966 | WP_071554107.1 | Ig domain-containing protein | - |
| BLL42_RS21900 () | 4556713..4557030 | + | 318 | WP_071554109.1 | hypothetical protein | - |
| BLL42_RS21905 () | 4557034..4557537 | + | 504 | WP_071554111.1 | hypothetical protein | - |
| BLL42_RS21910 () | 4557540..4557911 | + | 372 | WP_071554113.1 | hypothetical protein | - |
| BLL42_RS21915 () | 4557908..4558561 | + | 654 | WP_071554115.1 | hypothetical protein | - |
| BLL42_RS21920 () | 4558558..4558974 | + | 417 | WP_071554117.1 | DUF4128 domain-containing protein | - |
| BLL42_RS21925 () | 4559044..4559697 | + | 654 | WP_071554119.1 | phage tail protein | - |
| BLL42_RS21930 () | 4559701..4560081 | + | 381 | WP_071554121.1 | phage tail assembly chaperone | - |
| BLL42_RS21935 () | 4560141..4560398 | + | 258 | WP_071554123.1 | DUF1799 domain-containing protein | - |
| BLL42_RS21940 () | 4560395..4563661 | + | 3267 | WP_071554125.1 | phage tail tape measure protein | - |
| BLL42_RS21945 () | 4563661..4563999 | + | 339 | WP_071554127.1 | phage tail protein | - |
| BLL42_RS21950 () | 4564009..4564757 | + | 749 | Protein_4271 | phage minor tail protein L | - |
| BLL42_RS21955 () | 4564760..4565515 | + | 756 | WP_071554129.1 | C40 family peptidase | - |
| BLL42_RS21960 () | 4565549..4565947 | + | 399 | WP_071554131.1 | hypothetical protein | - |
| BLL42_RS21965 () | 4566023..4566583 | + | 561 | WP_081427361.1 | tail assembly protein | - |
| BLL42_RS21970 () | 4566640..4570272 | + | 3633 | WP_071554135.1 | phage tail protein | - |
| BLL42_RS21975 () | 4570288..4570599 | + | 312 | WP_071554137.1 | hypothetical protein | - |
| BLL42_RS21980 () | 4570599..4571279 | + | 681 | WP_071554139.1 | hypothetical protein | - |
| BLL42_RS21985 () | 4571344..4572294 | + | 951 | WP_071554141.1 | hypothetical protein | - |
| BLL42_RS21990 () | 4572346..4572771 | + | 426 | WP_081427322.1 | structural protein | - |
| BLL42_RS21995 () | 4572777..4573298 | + | 522 | WP_071554143.1 | lysis system i-spanin subunit Rz | - |
| BLL42_RS22000 () | 4573303..4573698 | - | 396 | WP_071554145.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| BLL42_RS22005 () | 4574390..4574947 | - | 558 | WP_071554147.1 | Smr/MutS family protein | - |
| BLL42_RS22010 () | 4575023..4575343 | - | 321 | WP_071554149.1 | hypothetical protein | - |
| BLL42_RS22015 () | 4575476..4576066 | - | 591 | WP_071554151.1 | cysteine hydrolase | - |
| BLL42_RS22020 () | 4576305..4577213 | + | 909 | WP_071554153.1 | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | - |
| BLL42_RS22025 () | 4577302..4578093 | - | 792 | WP_071554155.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|