MGE detailed information
MGE type: Prophage MGE length: 42774 bp
Accession: NZ_CP017669 Location: 4871429..4914202 Organism: Escherichia coli strain PA20 Replicon: chromosome
Accession: NZ_CP017669 Location: 4871429..4914202 Organism: Escherichia coli strain PA20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
AU473_RS25175 () | 4867721..4868677 | + | 957 | WP_000121321.1 | molybdenum cofactor insertion chaperone PaoD | - |
AU473_RS25180 () | 4868856..4869983 | - | 1128 | WP_000171064.1 | MFS transporter | - |
AU473_RS25185 () | 4870125..4871183 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
AU473_RS25190 () | 4871429..4872331 | + | 903 | WP_010917758.1 | HTH-type transcriptional regulator PgrR | VF |
AU473_RS25195 () | 4873034..4873312 | - | 279 | WP_001301751.1 | hypothetical protein | - |
AU473_RS25200 () | 4873479..4874201 | - | 723 | WP_000361969.1 | putative oxidoreductase | VF |
AU473_RS25205 () | 4874300..4875199 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator PgrR | VF |
AU473_RS25210 () | 4875875..4876831 | + | 957 | WP_000205213.1 | hypothetical protein | - |
AU473_RS25215 () | 4876964..4879297 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
AU473_RS25220 () | 4879311..4879634 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
AU473_RS25225 () | 4879634..4879855 | - | 222 | WP_001071227.1 | hypothetical protein | - |
AU473_RS25230 () | 4879852..4880409 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
AU473_RS25235 () | 4880406..4880666 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
AU473_RS25245 () | 4881600..4882352 | + | 753 | WP_000154958.1 | septation initiation protein | - |
AU473_RS25250 () | 4882349..4882900 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
AU473_RS25255 () | 4882906..4883178 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
AU473_RS25260 () | 4883588..4884154 | - | 567 | WP_000350115.1 | hypothetical protein | - |
AU473_RS25265 () | 4884154..4884744 | - | 591 | WP_000647284.1 | hypothetical protein | - |
AU473_RS25270 () | 4884775..4885407 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
AU473_RS25275 () | 4885400..4885858 | - | 459 | WP_000251694.1 | hypothetical protein | - |
AU473_RS25280 () | 4885858..4886475 | - | 618 | WP_001303996.1 | hypothetical protein | - |
AU473_RS25285 () | 4886448..4886864 | - | 417 | WP_000082144.1 | hypothetical protein | - |
AU473_RS25290 () | 4886868..4888049 | - | 1182 | WP_001130487.1 | Prophage integrase IntS ; Integrase | Integrase |
AU473_RS25300 () | 4888536..4888970 | + | 435 | Protein_4799 | IS3 family transposase ISEc48 | Transposase |
AU473_RS25305 () | 4889012..4889755 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
AU473_RS25310 () | 4890579..4891352 | + | 774 | WP_000355475.1 | hypothetical protein | - |
AU473_RS25315 () | 4891410..4891964 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
AU473_RS25320 () | 4891994..4892404 | + | 411 | WP_001115553.1 | tail fiber protein | - |
AU473_RS25325 () | 4892425..4892868 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
AU473_RS25330 () | 4892840..4893433 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
AU473_RS25335 () | 4893433..4894227 | - | 795 | WP_001096963.1 | tail fiber protein | - |
AU473_RS25340 () | 4894227..4894538 | - | 312 | WP_000788819.1 | hypothetical protein | - |
AU473_RS25345 () | 4894535..4895457 | - | 923 | Protein_4808 | replication protein | - |
AU473_RS25350 () | 4895490..4895783 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
AU473_RS25355 () | 4895902..4896102 | - | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
AU473_RS25360 () | 4896203..4896916 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
AU473_RS25365 () | 4897044..4897433 | + | 390 | WP_000708838.1 | hypothetical protein | - |
AU473_RS25370 () | 4897673..4897918 | + | 246 | WP_001303805.1 | transcription antitermination protein | - |
AU473_RS25375 () | 4897863..4898783 | + | 921 | Protein_4814 | Tyrosine recombinase XerD ; Integrase | Integrase |
AU473_RS25385 () | 4898988..4900241 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
AU473_RS25390 () | 4900253..4901356 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
AU473_RS25395 () | 4901644..4902699 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
AU473_RS25400 () | 4902738..4903139 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
AU473_RS25405 () | 4903197..4904441 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
- () | 4903857..4903937 | - | 81 | NuclAT_12 | - | - |
- () | 4903857..4903937 | - | 81 | NuclAT_12 | - | - |
- () | 4903857..4903937 | - | 81 | NuclAT_12 | - | - |
- () | 4903857..4903937 | - | 81 | NuclAT_12 | - | - |
AU473_RS25410 () | 4904533..4904991 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
AU473_RS25415 () | 4905252..4906709 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
AU473_RS25420 () | 4906766..4907287 | - | 522 | Protein_4822 | peptide chain release factor H | - |
AU473_RS25425 () | 4907286..4907489 | - | 204 | Protein_4823 | RNA ligase RtcB family protein | - |
AU473_RS25430 () | 4907808..4908260 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
AU473_RS25435 () | 4908270..4908668 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
AU473_RS25440 () | 4908671..4908964 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
AU473_RS25445 () | 4909016..4910071 | - | 1056 | WP_001226188.1 | DNA polymerase IV | - |
AU473_RS25450 () | 4910142..4910927 | - | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
AU473_RS25455 () | 4910899..4912611 | + | 1713 | Protein_4829 | Flagellar biosynthesis protein FlhA | VF |
AU473_RS32235 () | 4912756..4913253 | - | 498 | Protein_4830 | REP-associated tyrosine transposase RayT | - |
AU473_RS25465 () | 4913429..4914202 | - | 774 | WP_000543891.1 | Murein DD-endopeptidase MepH | VF |
AU473_RS25470 () | 4914388..4914648 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
AU473_RS25475 () | 4914667..4914927 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
AU473_RS25480 () | 4915083..4915823 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
AU473_RS25485 () | 4915794..4916561 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
AU473_RS25490 () | 4916666..4917244 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|