MGE detailed information
MGE type: Prophage MGE length: 52657 bp
Accession: NZ_CP017669 Location: 3531589..3584245 Organism: Escherichia coli strain PA20 Replicon: chromosome
Accession: NZ_CP017669 Location: 3531589..3584245 Organism: Escherichia coli strain PA20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AU473_RS18410 () | 3526644..3527024 | + | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| AU473_RS18415 () | 3527021..3527368 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AU473_RS18420 () | 3527418..3528956 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| AU473_RS18425 () | 3528994..3529389 | - | 396 | Protein_3492 | IS256 family transposase | - |
| AU473_RS31990 () | 3529539..3530189 | - | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| AU473_RS18440 () | 3530900..3531475 | - | 576 | Protein_3494 | DUF1076 domain-containing protein | - |
| AU473_RS18445 () | 3531589..3531858 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| AU473_RS18450 () | 3531860..3533083 | - | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AU473_RS18455 () | 3533148..3533747 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| AU473_RS32645 () | 3533815..3534470 | - | 656 | Protein_3498 | host specificity protein J | - |
| AU473_RS32650 () | 3534498..3535994 | - | 1497 | Protein_3499 | host specificity protein J | - |
| AU473_RS30460 () | 3536085..3537289 | - | 1205 | Protein_3500 | host specificity protein J | - |
| AU473_RS18470 () | 3537631..3538263 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| AU473_RS18475 () | 3538209..3538952 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| AU473_RS18480 () | 3538963..3539661 | - | 699 | WP_001179481.1 | phage minor tail protein L | - |
| AU473_RS18485 () | 3539661..3540002 | - | 342 | WP_000807954.1 | phage tail protein | - |
| AU473_RS18490 () | 3539995..3543237 | - | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| AU473_RS18495 () | 3543285..3543494 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| AU473_RS18500 () | 3543590..3543964 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| AU473_RS18505 () | 3543979..3544695 | - | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| AU473_RS18510 () | 3544761..3545105 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| AU473_RS18515 () | 3545102..3545548 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| AU473_RS18520 () | 3545545..3545895 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| AU473_RS18525 () | 3545905..3546231 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| AU473_RS18530 () | 3546234..3548813 | - | 2580 | WP_001304108.1 | phage portal protein | - |
| AU473_RS18535 () | 3548759..3548980 | - | 222 | WP_001063094.1 | hypothetical protein | - |
| AU473_RS18540 () | 3549025..3550962 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| AU473_RS18545 () | 3551026..3552687 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| AU473_RS18550 () | 3552684..3553247 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| AU473_RS30470 () | 3553537..3553902 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| AU473_RS18560 () | 3553944..3554171 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| AU473_RS31995 () | 3554596..3554781 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| AU473_RS32005 () | 3555009..3555155 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| AU473_RS18575 () | 3555155..3555724 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| AU473_RS18580 () | 3555994..3556527 | - | 534 | WP_000992137.1 | lysozyme | - |
| AU473_RS18585 () | 3556578..3556922 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| AU473_RS18590 () | 3556927..3557142 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| AU473_RS30490 () | 3557538..3559384 | - | 1847 | Protein_3526 | DUF1737 domain-containing protein | - |
| AU473_RS18610 () | 3559610..3559865 | - | 256 | Protein_3527 | DUF3927 family protein | - |
| AU473_RS18615 () | 3559862..3560293 | - | 432 | WP_001302123.1 | tellurite resistance protein | - |
| AU473_RS18630 () | 3560925..3561614 | - | 690 | WP_001059381.1 | antiterminator | - |
| AU473_RS18635 () | 3561611..3561970 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AU473_RS18640 () | 3561983..3563032 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| AU473_RS30505 () | 3563034..3563312 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| AU473_RS18650 () | 3563480..3563635 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| AU473_RS30515 () | 3563881..3563985 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| AU473_RS18655 () | 3564101..3564685 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| AU473_RS18660 () | 3564742..3565137 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| AU473_RS18665 () | 3565153..3565922 | - | 770 | Protein_3537 | DUF1627 domain-containing protein | - |
| AU473_RS18675 () | 3565948..3566688 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| AU473_RS18680 () | 3566695..3567657 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| AU473_RS18685 () | 3567680..3568105 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| AU473_RS18690 () | 3568102..3568404 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| AU473_RS30520 () | 3568502..3568873 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| AU473_RS18700 () | 3568894..3569085 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| AU473_RS18705 () | 3569087..3569365 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AU473_RS18715 () | 3569718..3570017 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| AU473_RS18720 () | 3570089..3570307 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| AU473_RS18725 () | 3570876..3571064 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| AU473_RS18730 () | 3571061..3571252 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| AU473_RS18735 () | 3571345..3573816 | + | 2472 | WP_000048458.1 | exonuclease | - |
| AU473_RS18740 () | 3573889..3574140 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| AU473_RS32010 () | 3574175..3574362 | + | 188 | Protein_3551 | DUF3596 domain-containing protein | - |
| AU473_RS18750 () | 3575129..3575455 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| AU473_RS18755 () | 3575590..3575931 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| AU473_RS18760 () | 3575966..3576526 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AU473_RS18765 () | 3576529..3577239 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| AU473_RS18770 () | 3577347..3577652 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| AU473_RS18775 () | 3577851..3580277 | + | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| AU473_RS18780 () | 3580338..3582761 | + | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| AU473_RS18785 () | 3582772..3583389 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| AU473_RS18790 () | 3583391..3584245 | + | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| AU473_RS18795 () | 3584288..3584902 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| AU473_RS18800 () | 3585060..3586352 | + | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| AU473_RS18805 () | 3586305..3587000 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| AU473_RS18810 () | 3587125..3588345 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|