MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 132293 bp
Accession: NZ_CP017666 Location: 887539..1019831 Organism: Streptococcus suis strain 0061 Replicon: chromosome
Accession: NZ_CP017666 Location: 887539..1019831 Organism: Streptococcus suis strain 0061 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKM66_RS04380 () | 883312..884229 | + | 918 | WP_002937619.1 | phosphate ABC transporter permease subunit PstC | - |
| BKM66_RS04385 () | 884219..885106 | + | 888 | WP_014635996.1 | phosphate ABC transporter permease PstA | - |
| BKM66_RS04390 () | 885131..885934 | + | 804 | WP_029185151.1 | phosphate ABC transporter ATP-binding protein | - |
| BKM66_RS04395 () | 885946..886704 | + | 759 | WP_105184039.1 | phosphate ABC transporter ATP-binding protein | - |
| BKM66_RS04400 () | 886731..887387 | + | 657 | WP_024413748.1 | phosphate signaling complex protein PhoU | - |
| BKM66_RS04405 () | 887553..888026 | + | 474 | WP_105184038.1 | hypothetical protein | - |
| BKM66_RS04410 () | 888220..888891 | + | 672 | WP_024385291.1 | Response regulator ArlR | VF |
| BKM66_RS04415 () | 888884..890263 | + | 1380 | WP_105184037.1 | HAMP domain-containing histidine kinase | - |
| BKM66_RS04420 () | 890364..891593 | + | 1230 | WP_044679497.1 | transglutaminase | - |
| BKM66_RS04425 () | 891856..892104 | - | 249 | WP_012027069.1 | 30S ribosomal protein S20 | - |
| BKM66_RS04430 () | 892163..893083 | - | 921 | WP_002935283.1 | type I pantothenate kinase | - |
| BKM66_RS04435 () | 893192..893782 | + | 591 | WP_024376492.1 | class I SAM-dependent methyltransferase | - |
| BKM66_RS04440 () | 893779..895056 | + | 1278 | WP_024385288.1 | pyrimidine-nucleoside phosphorylase | - |
| BKM66_RS04445 () | 895072..895734 | + | 663 | WP_044679493.1 | deoxyribose-phosphate aldolase | - |
| BKM66_RS04450 () | 895721..896110 | + | 390 | WP_002940839.1 | cytidine deaminase | - |
| BKM66_RS04455 () | 896191..897258 | + | 1068 | WP_002940836.1 | BMP family protein | - |
| BKM66_RS04460 () | 897453..898988 | + | 1536 | WP_014637858.1 | Galactose/methyl galactoside import ATP-binding protein MglA | VF |
| BKM66_RS04465 () | 898981..900042 | + | 1062 | WP_002935270.1 | ABC transporter permease | - |
| BKM66_RS04470 () | 900044..900997 | + | 954 | WP_012775589.1 | ABC transporter permease | - |
| BKM66_RS04475 () | 901036..902292 | - | 1257 | WP_105137943.1 | ISL3 family transposase ISSsu6 | Transposase |
| BKM66_RS04480 () | 902522..903154 | + | 633 | WP_192874036.1 | dihydrofolate reductase family protein | - |
| BKM66_RS04485 () | 903197..904180 | - | 984 | WP_002940816.1 | L-lactate dehydrogenase | - |
| BKM66_RS04490 () | 904369..906813 | + | 2445 | WP_024402193.1 | DNA gyrase subunit A | - |
| BKM66_RS04495 () | 906820..907569 | + | 750 | WP_024385286.1 | hypothetical protein | VF |
| BKM66_RS04500 () | 907684..908364 | + | 681 | WP_002935253.1 | DNA repair protein RadC | - |
| BKM66_RS04505 () | 908361..909052 | - | 692 | Protein_817 | Putative glutamine amidotransferase | VF |
| BKM66_RS04510 () | 909056..909694 | - | 639 | WP_002935251.1 | redox-sensing transcriptional repressor Rex | - |
| BKM66_RS04515 () | 909829..910032 | - | 204 | WP_024378702.1 | DUF4649 family protein | - |
| BKM66_RS04520 () | 910034..910378 | - | 345 | WP_024385282.1 | DUF1831 domain-containing protein | - |
| BKM66_RS04525 () | 910380..911495 | - | 1116 | WP_105183854.1 | cysteine desulfurase | - |
| BKM66_RS04530 () | 911507..912484 | - | 978 | WP_012775438.1 | ribose-phosphate diphosphokinase | - |
| BKM66_RS04535 () | 912629..913195 | - | 567 | WP_105183855.1 | CYTH domain-containing protein | - |
| BKM66_RS04540 () | 913282..913953 | + | 672 | WP_002935242.1 | GTP pyrophosphokinase family protein | - |
| BKM66_RS04545 () | 913928..914755 | + | 828 | WP_032497578.1 | NAD kinase | - |
| BKM66_RS04550 () | 914755..915648 | + | 894 | WP_024402187.1 | RluA family pseudouridine synthase | - |
| BKM66_RS04555 () | 915666..916640 | + | 975 | WP_012775151.1 | phosphate acetyltransferase | - |
| BKM66_RS04560 () | 916642..918381 | + | 1740 | WP_105125725.1 | ABC transporter ATP-binding protein/permease | - |
| BKM66_RS04565 () | 918368..920110 | + | 1743 | WP_105183856.1 | putative ABC transporter ATP-binding protein | VF |
| BKM66_RS04570 () | 920100..920486 | + | 387 | WP_079395395.1 | PaaI family thioesterase | - |
| BKM66_RS04575 () | 920719..921879 | + | 1161 | WP_161948790.1 | A/G-specific adenine glycosylase | - |
| BKM66_RS04580 () | 922544..923344 | - | 801 | WP_105119051.1 | XRE family transcriptional regulator | - |
| BKM66_RS04585 () | 923475..923945 | + | 471 | WP_044677252.1 | hypothetical protein | - |
| BKM66_RS04590 () | 923965..924507 | + | 543 | WP_105119052.1 | hypothetical protein | - |
| BKM66_RS04595 () | 924682..924918 | - | 237 | WP_162564172.1 | hypothetical protein | - |
| BKM66_RS04600 () | 925181..926461 | + | 1281 | WP_105119054.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| BKM66_RS04605 () | 926530..928062 | - | 1533 | WP_105119055.1 | ATP-binding cassette domain-containing protein | - |
| BKM66_RS04610 () | 928362..928853 | + | 492 | WP_105119056.1 | GNAT family N-acetyltransferase | - |
| BKM66_RS04620 () | 928959..930015 | - | 1057 | Protein_839 | IS630 family transposase | - |
| BKM66_RS04625 () | 930044..930445 | + | 402 | WP_105206127.1 | adenylate kinase | - |
| BKM66_RS04630 () | 930470..931210 | - | 741 | WP_002940438.1 | Arginine transport ATP-binding protein ArtM | VF |
| BKM66_RS04635 () | 931210..933408 | - | 2199 | WP_044762813.1 | Glutamine transport system permease protein GlnP | VF |
| BKM66_RS04640 () | 933606..935591 | + | 1986 | WP_024402176.1 | excinuclease ABC subunit B | - |
| BKM66_RS04645 () | 935777..941854 | + | 6078 | WP_105184224.1 | Immunoglobulin A1 protease | VF |
| BKM66_RS04650 () | 941932..942435 | + | 504 | WP_161948732.1 | GNAT family N-acetyltransferase | - |
| BKM66_RS04655 () | 942428..942895 | + | 468 | WP_105119077.1 | 8-oxo-dGTP diphosphatase | - |
| BKM66_RS04660 () | 943333..944202 | + | 870 | WP_105115600.1 | MerR family transcriptional regulator | - |
| BKM66_RS04665 () | 944619..944897 | + | 279 | WP_024390056.1 | ethanolamine utilization microcompartment protein EutM | - |
| BKM66_RS04670 () | 944931..945926 | + | 996 | WP_024390055.1 | DMT family transporter | - |
| BKM66_RS04675 () | 945930..946214 | + | 285 | WP_024390054.1 | hypothetical protein | - |
| BKM66_RS04680 () | 946227..946523 | + | 297 | WP_024408818.1 | BMC domain-containing protein | - |
| BKM66_RS04685 () | 946538..946855 | + | 318 | WP_024408819.1 | BMC domain-containing protein | - |
| BKM66_RS04690 () | 946871..948232 | + | 1362 | WP_105119076.1 | aldehyde dehydrogenase | - |
| BKM66_RS04695 () | 948265..950811 | + | 2547 | WP_024408821.1 | choline trimethylamine-lyase | - |
| BKM66_RS04700 () | 950882..951868 | + | 987 | WP_024402171.1 | choline TMA-lyase-activating enzyme | - |
| BKM66_RS04705 () | 951892..952230 | + | 339 | WP_024390048.1 | BMC domain-containing protein | - |
| BKM66_RS04710 () | 952227..952673 | + | 447 | WP_105119075.1 | hypothetical protein | - |
| BKM66_RS04715 () | 952670..953803 | + | 1134 | WP_105119074.1 | Alcohol dehydrogenase 2 | VF |
| BKM66_RS04720 () | 953844..954458 | + | 615 | WP_105184225.1 | hypothetical protein | - |
| BKM66_RS04725 () | 954436..955278 | + | 843 | WP_161942649.1 | ethanolamine utilization protein EutJ | - |
| BKM66_RS04730 () | 955287..955586 | + | 300 | WP_024390043.1 | EutN/CcmL family microcompartment protein | - |
| BKM66_RS04735 () | 955599..956231 | + | 633 | WP_024390042.1 | DUF861 domain-containing protein | - |
| BKM66_RS04740 () | 956250..956876 | + | 627 | WP_105184226.1 | BMC domain-containing protein | - |
| BKM66_RS04745 () | 956897..958534 | + | 1638 | WP_105184227.1 | Aldehyde-alcohol dehydrogenase | VF |
| BKM66_RS04750 () | 958546..959238 | + | 693 | WP_105184228.1 | phosphate propanoyltransferase | - |
| BKM66_RS04755 () | 959253..959525 | + | 273 | WP_024390038.1 | BMC domain-containing protein | - |
| BKM66_RS04760 () | 959561..959833 | + | 273 | WP_024400636.1 | BMC domain-containing protein | - |
| BKM66_RS04765 () | 959868..960146 | + | 279 | WP_024400635.1 | ethanolamine utilization microcompartment protein EutM | - |
| BKM66_RS04770 () | 960229..963858 | + | 3630 | WP_105184229.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| BKM66_RS04775 () | 964435..965247 | + | 813 | WP_162636985.1 | Arginine-binding extracellular protein ArtP | VF |
| BKM66_RS04780 () | 965420..966220 | + | 801 | WP_105184230.1 | transporter substrate-binding domain-containing protein | - |
| BKM66_RS04785 () | 966348..968186 | - | 1839 | WP_105184231.1 | 1,4-alpha-glucan branching protein GlgB | - |
| BKM66_RS04790 () | 968259..969704 | - | 1446 | WP_105184232.1 | glycogen synthase GlgA | - |
| BKM66_RS04795 () | 969713..970828 | - | 1116 | WP_024385258.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| BKM66_RS04800 () | 970841..971968 | - | 1128 | WP_002935156.1 | glucose-1-phosphate adenylyltransferase | - |
| BKM66_RS04805 () | 972132..973043 | - | 912 | WP_105115614.1 | HTH-type transcriptional regulator GltC | VF |
| BKM66_RS04810 () | 973207..974031 | + | 825 | WP_105184254.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
| BKM66_RS04815 () | 974041..974982 | + | 942 | WP_105184233.1 | dihydroorotate dehydrogenase | - |
| BKM66_RS04820 () | 975147..975842 | + | 696 | WP_105184234.1 | orotidine-5'-phosphate decarboxylase | - |
| BKM66_RS04825 () | 975835..976161 | + | 327 | WP_105184235.1 | inorganic diphosphatase | - |
| BKM66_RS04830 () | 976299..976931 | + | 633 | WP_014637891.1 | orotate phosphoribosyltransferase | - |
| BKM66_RS04835 () | 977040..977966 | + | 927 | WP_105184236.1 | Putative glycosyltransferase CsbB | VF |
| BKM66_RS04840 () | 977976..978629 | + | 654 | WP_105184237.1 | uracil-DNA glycosylase | - |
| BKM66_RS04845 () | 978669..979937 | + | 1269 | WP_105184238.1 | dihydroorotase | - |
| BKM66_RS04850 () | 980069..982153 | + | 2085 | WP_153055024.1 | Mannosylglucosyl-3-phosphoglycerate phosphatase | VF |
| BKM66_RS04855 () | 982205..982879 | + | 675 | WP_105184240.1 | Maf family protein | - |
| BKM66_RS04860 () | 983209..983697 | + | 489 | WP_105184241.1 | YkgJ family cysteine cluster protein | - |
| BKM66_RS04865 () | 983797..984648 | + | 852 | WP_105184242.1 | Ribosome biogenesis GTPase A | VF |
| BKM66_RS04870 () | 984635..985408 | + | 774 | WP_105120522.1 | ribonuclease HII | - |
| BKM66_RS04875 () | 985411..986421 | + | 1011 | WP_105120523.1 | YdcF family protein | - |
| BKM66_RS04880 () | 986454..987104 | - | 651 | WP_014735830.1 | hypothetical protein | VF |
| BKM66_RS04885 () | 987094..987645 | - | 552 | WP_044675003.1 | DUF1836 domain-containing protein | - |
| BKM66_RS04890 () | 987753..989405 | - | 1653 | WP_105120524.1 | FAD-dependent oxidoreductase | - |
| BKM66_RS04895 () | 989402..989725 | - | 324 | WP_105120525.1 | rhodanese-like domain-containing protein | - |
| BKM66_RS04900 () | 989832..990092 | + | 261 | WP_009909865.1 | metal-sensitive transcriptional regulator | - |
| BKM66_RS04905 () | 990103..990660 | + | 558 | WP_105184243.1 | Maltose O-acetyltransferase | VF |
| BKM66_RS04910 () | 990719..991561 | + | 843 | WP_105120527.1 | DNA-processing protein DprA | - |
| BKM66_RS04915 () | 991654..993747 | + | 2094 | WP_105184244.1 | type I DNA topoisomerase | - |
| BKM66_RS04920 () | 994315..994809 | + | 495 | WP_105184245.1 | 50S ribosomal protein L10 | - |
| BKM66_RS04925 () | 994875..995240 | + | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| BKM66_RS04930 () | 995365..996114 | + | 750 | WP_105184246.1 | HAD family hydrolase | - |
| BKM66_RS04935 () | 996310..997644 | + | 1335 | WP_024390388.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| BKM66_RS04940 () | 997722..998726 | + | 1005 | WP_029171762.1 | winged helix DNA-binding domain-containing protein | - |
| BKM66_RS04945 () | 998840..999667 | + | 828 | WP_024395846.1 | alpha/beta hydrolase | - |
| BKM66_RS04950 () | 999698..1000444 | + | 747 | WP_024395847.1 | esterase family protein | - |
| BKM66_RS04955 () | 1000462..1001628 | + | 1167 | WP_105184247.1 | ATP-grasp domain-containing protein | - |
| BKM66_RS10355 () | 1001769..1001909 | + | 141 | WP_032532220.1 | hypothetical protein | - |
| BKM66_RS04965 () | 1001922..1002311 | + | 390 | WP_105184248.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| BKM66_RS04970 () | 1002320..1003072 | + | 753 | WP_015646831.1 | ABC transporter ATP-binding protein YxdL | VF |
| BKM66_RS04975 () | 1003073..1005043 | + | 1971 | WP_105184249.1 | ABC transporter permease | - |
| BKM66_RS04980 () | 1005136..1005375 | + | 240 | WP_024418295.1 | hypothetical protein | Antitoxin Detail |
| BKM66_RS04985 () | 1005365..1005631 | + | 267 | WP_029171768.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BKM66_RS04990 () | 1005673..1006338 | + | 666 | WP_105184250.1 | Response regulator protein GraR | VF |
| BKM66_RS04995 () | 1006335..1007276 | + | 942 | WP_105184251.1 | sensor histidine kinase | - |
| BKM66_RS05000 () | 1007351..1008859 | + | 1509 | WP_105123656.1 | Phosphomannomutase/phosphoglucomutase | VF |
| BKM66_RS05010 () | 1009200..1010270 | - | 1071 | WP_105115640.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| BKM66_RS05015 () | 1010443..1010967 | - | 525 | WP_105119906.1 | AAA family ATPase | - |
| BKM66_RS05020 () | 1011032..1011772 | - | 741 | WP_105119907.1 | DUF3307 domain-containing protein | - |
| BKM66_RS05025 () | 1011777..1012445 | - | 669 | WP_029171776.1 | SatD family protein | - |
| BKM66_RS05030 () | 1012639..1014213 | - | 1575 | WP_024388685.1 | signal recognition particle protein | - |
| BKM66_RS05035 () | 1014226..1014558 | - | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| BKM66_RS05040 () | 1014660..1015358 | - | 699 | WP_105184252.1 | GntR family transcriptional regulator | - |
| BKM66_RS05045 () | 1015634..1017184 | + | 1551 | WP_105184253.1 | glutamine-hydrolyzing GMP synthase | - |
| BKM66_RS05050 () | 1017878..1018156 | - | 279 | WP_024407057.1 | helix-turn-helix domain-containing protein | - |
| BKM66_RS05055 () | 1018329..1018589 | - | 261 | Protein_925 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| BKM66_RS05065 () | 1018759..1019496 | - | 738 | WP_010725416.1 | rRNA adenine N-6-methyltransferase | ARG |
| BKM66_RS05070 () | 1019621..1019689 | - | 69 | WP_105117102.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| BKM66_RS05075 () | 1019781..1019987 | + | 207 | WP_024406352.1 | helix-turn-helix domain-containing protein | - |
| BKM66_RS05080 () | 1020012..1021313 | - | 1302 | WP_024406351.1 | hypothetical protein | - |
| BKM66_RS05085 () | 1021567..1021875 | + | 309 | WP_024417958.1 | hypothetical protein | - |
| BKM66_RS05090 () | 1021898..1022422 | + | 525 | WP_024415777.1 | hypothetical protein | - |
| BKM66_RS05095 () | 1022931..1024169 | + | 1239 | WP_105184221.1 | replication initiation protein | - |
| BKM66_RS05100 () | 1024147..1024380 | + | 234 | WP_050573319.1 | DUF3173 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|