MGE detailed information
MGE type: Genomic_island MGE length: 22974 bp
Accession: NZ_CP017638 Location: 174133..197106 Organism: Dickeya dianthicola RNS04.9 Replicon: chromosome
Accession: NZ_CP017638 Location: 174133..197106 Organism: Dickeya dianthicola RNS04.9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDI_RS00795 () | 169908..170978 | + | 1071 | WP_024104347.1 | LPS export ABC transporter permease LptG | - |
| DDI_RS00805 () | 171504..172772 | + | 1269 | WP_024104348.1 | tyrosine-type recombinase/integrase | - |
| DDI_RS00810 () | 172872..174089 | + | 1218 | WP_024104349.1 | dNTP triphosphohydrolase | - |
| DDI_RS00815 () | 174133..175761 | + | 1629 | WP_024104350.1 | TIGR04141 family sporadically distributed protein | - |
| DDI_RS00820 () | 175893..176108 | - | 216 | WP_046830366.1 | helix-turn-helix domain-containing protein | - |
| DDI_RS00825 () | 176204..176470 | + | 267 | WP_015848023.1 | helix-turn-helix domain-containing protein | - |
| DDI_RS00830 () | 176693..178738 | - | 2046 | WP_024104352.1 | AAA family ATPase | - |
| DDI_RS00835 () | 178731..179267 | - | 537 | WP_071598725.1 | ash family protein | - |
| DDI_RS00840 () | 179264..179464 | - | 201 | WP_024104354.1 | AlpA family transcriptional regulator | - |
| DDI_RS00845 () | 179467..180348 | - | 882 | WP_024104355.1 | integrase domain-containing protein | - |
| DDI_RS00855 () | 181387..181746 | + | 360 | WP_024104356.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DDI_RS00860 () | 181730..182053 | + | 324 | WP_024104357.1 | DNA-binding transcriptional regulator | - |
| DDI_RS00865 () | 182349..183611 | + | 1263 | WP_024104358.1 | AAA family ATPase | - |
| DDI_RS00870 () | 183611..184240 | + | 630 | WP_024104359.1 | DUF4276 family protein | - |
| DDI_RS00875 () | 185165..185485 | + | 321 | WP_024104360.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DDI_RS00880 () | 185475..185759 | + | 285 | WP_024104361.1 | helix-turn-helix domain-containing protein | - |
| DDI_RS00890 () | 186057..186458 | - | 402 | WP_024104362.1 | hypothetical protein | - |
| DDI_RS00895 () | 186487..186966 | - | 480 | WP_013316117.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DDI_RS00900 () | 186957..187229 | - | 273 | WP_024104363.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DDI_RS00905 () | 187719..188142 | + | 424 | Protein_176 | DUF4102 domain-containing protein | - |
| DDI_RS00910 () | 188154..188998 | - | 845 | Protein_177 | IS5 family transposase | - |
| DDI_RS00915 () | 189050..189271 | - | 222 | WP_024104365.1 | DUF1778 domain-containing protein | - |
| DDI_RS21980 () | 189342..189410 | + | 69 | Protein_179 | integrase | - |
| DDI_RS00930 () | 189569..190957 | + | 1389 | WP_024104366.1 | hypothetical protein | - |
| DDI_RS00935 () | 191107..191445 | - | 339 | WP_024104367.1 | hypothetical protein | - |
| DDI_RS00940 () | 191918..192721 | + | 804 | WP_024104368.1 | hypothetical protein | - |
| DDI_RS00945 () | 192811..193437 | - | 627 | WP_024104369.1 | LysE/ArgO family amino acid transporter | - |
| DDI_RS00950 () | 193634..194116 | - | 483 | WP_024104370.1 | DNA mismatch endonuclease Vsr | - |
| DDI_RS00955 () | 194123..195553 | - | 1431 | WP_024104371.1 | DNA cytosine methyltransferase | - |
| DDI_RS00960 () | 195793..197106 | + | 1314 | WP_024104372.1 | hypothetical protein | - |
| DDI_RS00965 () | 197251..198651 | + | 1401 | WP_046830367.1 | MFS transporter | - |
| DDI_RS00970 () | 198797..199174 | + | 378 | WP_024104374.1 | HNH endonuclease | - |
| DDI_RS00975 () | 199250..200041 | - | 792 | WP_024104375.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DDI_RS00980 () | 200407..201210 | + | 804 | WP_024104376.1 | transketolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|