MGE detailed information
MGE type: Prophage MGE length: 14005 bp
Accession: NZ_CP017631 Location: 4500079..4514083 Organism: Escherichia coli strain SLK172 Replicon: chromosome
Accession: NZ_CP017631 Location: 4500079..4514083 Organism: Escherichia coli strain SLK172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJJ90_RS24400 () | 4497677..4498402 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| BJJ90_RS24405 () | 4498439..4498978 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| BJJ90_RS24410 () | 4499043..4499597 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| BJJ90_RS24420 () | 4500079..4500675 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| BJJ90_RS24425 () | 4501152..4501754 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| BJJ90_RS24435 () | 4503208..4503924 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| BJJ90_RS24440 () | 4503944..4505050 | + | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| BJJ90_RS24445 () | 4505115..4506095 | + | 981 | WP_001295601.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| BJJ90_RS24450 () | 4506103..4506753 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| BJJ90_RS33510 () | 4507798..4507956 | - | 159 | WP_001467148.1 | hypothetical protein | - |
| BJJ90_RS24465 () | 4508035..4508232 | - | 198 | WP_000839249.1 | DUF957 domain-containing protein | - |
| BJJ90_RS24470 () | 4508244..4508732 | - | 489 | WP_001470575.1 | hypothetical protein | - |
| BJJ90_RS24475 () | 4508729..4509106 | - | 378 | WP_001506713.1 | TA system toxin CbtA family protein | Toxin Detail |
| BJJ90_RS24480 () | 4509153..4509527 | - | 375 | WP_052913677.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BJJ90_RS24490 () | 4509690..4509911 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| BJJ90_RS24495 () | 4509974..4510450 | - | 477 | WP_069723416.1 | RadC family protein | - |
| BJJ90_RS24500 () | 4510466..4510939 | - | 474 | WP_001368734.1 | antirestriction protein | - |
| BJJ90_RS24505 () | 4511033..4511278 | - | 246 | WP_001164975.1 | hypothetical protein | - |
| BJJ90_RS24510 () | 4511278..4511829 | - | 552 | Protein_4349 | DUF945 domain-containing protein | - |
| BJJ90_RS24515 () | 4511839..4512276 | - | 438 | Protein_4350 | DDE-type integrase/transposase/recombinase | - |
| BJJ90_RS24530 () | 4512330..4513543 | + | 1214 | WP_173662723.1 | IS3 family transposase IS629 | Transposase |
| BJJ90_RS24540 () | 4513586..4514083 | - | 498 | Protein_4352 | integrase arm-type DNA-binding domain-containing protein | - |
| BJJ90_RS24550 () | 4514550..4515569 | + | 1020 | WP_000061766.1 | NADPH-dependent aldehyde reductase Ahr | - |
| BJJ90_RS24555 () | 4515573..4516136 | - | 564 | WP_000896741.1 | gluconokinase | - |
| BJJ90_RS24565 () | 4516353..4517384 | + | 1032 | WP_001197410.1 | L-idonate 5-dehydrogenase | - |
| BJJ90_RS24570 () | 4517408..4518172 | + | 765 | WP_000998695.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|