MGE detailed information
MGE type: Genomic_island MGE length: 54240 bp
Accession: NZ_CP017631 Location: 4110153..4164392 Organism: Escherichia coli strain SLK172 Replicon: chromosome
Accession: NZ_CP017631 Location: 4110153..4164392 Organism: Escherichia coli strain SLK172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJJ90_RS22345 () | 4105701..4106396 | - | 696 | WP_000370307.1 | lactate utilization protein C | - |
| BJJ90_RS22350 () | 4106389..4107816 | - | 1428 | WP_000023927.1 | iron-sulfur cluster-binding protein | - |
| BJJ90_RS22355 () | 4107827..4108546 | - | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
| BJJ90_RS22360 () | 4109073..4109927 | - | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
| BJJ90_RS22365 () | 4110153..4110389 | + | 237 | Protein_3968 | FAD-dependent oxidoreductase | - |
| BJJ90_RS22370 () | 4110398..4111369 | - | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| BJJ90_RS22375 () | 4111458..4112327 | + | 870 | Protein_3970 | pyridine nucleotide-disulfide oxidoreductase | - |
| BJJ90_RS22380 () | 4112436..4112672 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| BJJ90_RS22385 () | 4112684..4113277 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| BJJ90_RS33490 () | 4113436..4113564 | - | 129 | Protein_3973 | aldo/keto reductase | - |
| BJJ90_RS22390 () | 4113867..4114718 | + | 852 | WP_001459486.1 | Right origin-binding protein | VF |
| BJJ90_RS22395 () | 4114858..4119114 | - | 4257 | WP_001564478.1 | Invasin | VF |
| BJJ90_RS22405 () | 4120229..4120330 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| BJJ90_RS22410 () | 4120694..4120957 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| BJJ90_RS22415 () | 4120957..4121097 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| BJJ90_RS22420 () | 4121132..4121359 | - | 228 | WP_001147279.1 | hypothetical protein | - |
| BJJ90_RS22430 () | 4122183..4122725 | + | 543 | WP_001301257.1 | HTH-type transcriptional regulator EcpR | VF |
| BJJ90_RS22435 () | 4122800..4123387 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| BJJ90_RS22440 () | 4123445..4124113 | + | 669 | WP_000716383.1 | putative fimbrial chaperone EcpB | VF |
| BJJ90_RS22445 () | 4124139..4126664 | + | 2526 | WP_001131096.1 | putative outer membrane usher protein EcpC | VF |
| BJJ90_RS22450 () | 4126654..4128297 | + | 1644 | WP_001301239.1 | Fimbria adhesin EcpD | VF |
| BJJ90_RS22455 () | 4128266..4128976 | + | 711 | WP_075362676.1 | putative fimbrial chaperone EcpE | VF |
| BJJ90_RS22460 () | 4129289..4129618 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| BJJ90_RS22470 () | 4129866..4130479 | - | 614 | Protein_3987 | YagU family protein | - |
| BJJ90_RS22480 () | 4130897..4131586 | + | 690 | WP_000070699.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| BJJ90_RS22485 () | 4131583..4132545 | + | 963 | WP_162783857.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| BJJ90_RS22490 () | 4132535..4134733 | + | 2199 | WP_069723451.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| BJJ90_RS22495 () | 4134743..4135699 | + | 957 | WP_000121346.1 | molybdenum cofactor insertion chaperone PaoD | - |
| BJJ90_RS22500 () | 4135750..4136088 | + | 339 | Protein_3992 | LysR family transcriptional regulator | - |
| BJJ90_RS22505 () | 4136430..4136789 | + | 360 | Protein_3993 | hypothetical protein | - |
| BJJ90_RS22510 () | 4136782..4137324 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| BJJ90_RS22520 () | 4137928..4138209 | - | 282 | WP_000588630.1 | PerC family transcriptional regulator | - |
| BJJ90_RS22525 () | 4138459..4138899 | + | 441 | WP_000230712.1 | hypothetical protein ; Integrase | Integrase |
| BJJ90_RS22530 () | 4138929..4139906 | - | 978 | WP_021542399.1 | Abi family protein | - |
| BJJ90_RS32260 () | 4140777..4141391 | + | 615 | WP_000087355.1 | hypothetical protein | - |
| BJJ90_RS22535 () | 4141411..4143516 | - | 2106 | WP_075362677.1 | injection protein | - |
| BJJ90_RS22540 () | 4143516..4144982 | - | 1467 | WP_075362678.1 | phage DNA ejection protein | - |
| BJJ90_RS33660 () | 4144987..4145160 | - | 174 | WP_001018522.1 | hypothetical protein | - |
| BJJ90_RS22555 () | 4145745..4148501 | - | 2757 | WP_075362680.1 | TOPRIM and DUF927 domain-containing protein | - |
| BJJ90_RS22560 () | 4148514..4149116 | - | 603 | WP_075362681.1 | hypothetical protein | - |
| BJJ90_RS22565 () | 4149109..4149330 | - | 222 | WP_075362682.1 | hypothetical protein | - |
| BJJ90_RS22570 () | 4149327..4149590 | - | 264 | WP_048943303.1 | hypothetical protein | - |
| BJJ90_RS22575 () | 4149587..4149781 | - | 195 | WP_001065661.1 | hypothetical protein | - |
| BJJ90_RS22580 () | 4149774..4150841 | - | 1068 | Protein_4007 | ash family protein | - |
| BJJ90_RS22585 () | 4150835..4151017 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| BJJ90_RS22590 () | 4151010..4151843 | - | 834 | WP_075362683.1 | antA/AntB antirepressor family protein | - |
| BJJ90_RS22595 () | 4151856..4152287 | - | 432 | WP_000412538.1 | hypothetical protein | - |
| BJJ90_RS22600 () | 4152287..4152490 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| BJJ90_RS22610 () | 4152919..4154133 | - | 1215 | WP_000772643.1 | Prophage integrase IntS ; Integrase | Integrase |
| BJJ90_RS22625 () | 4154489..4155742 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| BJJ90_RS22630 () | 4155754..4156857 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| BJJ90_RS22635 () | 4157145..4158200 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| BJJ90_RS22640 () | 4158239..4158640 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| BJJ90_RS22645 () | 4158698..4159942 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4159358..4159438 | - | 81 | NuclAT_9 | - | - |
| - () | 4159358..4159438 | - | 81 | NuclAT_9 | - | - |
| - () | 4159358..4159438 | - | 81 | NuclAT_9 | - | - |
| - () | 4159358..4159438 | - | 81 | NuclAT_9 | - | - |
| BJJ90_RS22650 () | 4160034..4160492 | - | 459 | WP_001291994.1 | xanthine phosphoribosyltransferase | - |
| BJJ90_RS22655 () | 4160753..4162210 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| BJJ90_RS22660 () | 4162267..4162788 | - | 522 | Protein_4020 | peptide chain release factor H | - |
| BJJ90_RS22665 () | 4162787..4162990 | - | 204 | Protein_4021 | RNA ligase RtcB family protein | - |
| BJJ90_RS22670 () | 4163236..4163688 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| BJJ90_RS22675 () | 4163698..4164096 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| BJJ90_RS22680 () | 4164099..4164392 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| BJJ90_RS22685 () | 4164444..4165499 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| BJJ90_RS22690 () | 4165570..4166355 | - | 786 | WP_000207587.1 | putative lateral flagellar export/assembly protein LafU | - |
| BJJ90_RS22695 () | 4166327..4168039 | + | 1713 | Protein_4027 | flagellar biosynthesis protein FlhA | - |
| BJJ90_RS22705 () | 4168263..4168759 | - | 497 | Protein_4028 | REP-associated tyrosine transposase RayT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|