MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP017598 Location: 3799468..3804410 Organism: Mycobacterium tuberculosis strain Beijing-like/1104 Replicon: chromosome
Accession: NZ_CP017598 Location: 3799468..3804410 Organism: Mycobacterium tuberculosis strain Beijing-like/1104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJM04_RS18495 () | 3795303..3796193 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| BJM04_RS18500 () | 3796202..3798040 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| BJM04_RS18505 () | 3798037..3799026 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BJM04_RS18510 () | 3799026..3799415 | - | 390 | Protein_3493 | polyprenyl synthetase family protein | - |
| BJM04_RS18515 () | 3799468..3800729 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| BJM04_RS18520 () | 3800771..3801436 | - | 666 | Protein_3495 | polyprenyl synthetase family protein | - |
| BJM04_RS18525 () | 3802190..3802582 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BJM04_RS18530 () | 3802582..3802857 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BJM04_RS18535 () | 3803069..3804410 | + | 1342 | Protein_3498 | ISNCY family transposase ISRjo3 | Transposase |
| BJM04_RS18540 () | 3804600..3806777 | + | 2178 | WP_016330440.1 | PE family protein | - |
| BJM04_RS18545 () | 3806848..3807720 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| BJM04_RS18550 () | 3807794..3808504 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |