MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP017596 Location: 3796927..3801869 Organism: Mycobacterium tuberculosis strain Beijing/391 Replicon: chromosome
Accession: NZ_CP017596 Location: 3796927..3801869 Organism: Mycobacterium tuberculosis strain Beijing/391 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJM02_RS18500 () | 3792762..3793652 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| BJM02_RS18505 () | 3793661..3795499 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| BJM02_RS18510 () | 3795496..3796485 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BJM02_RS18515 () | 3796485..3796874 | - | 390 | Protein_3497 | polyprenyl synthetase family protein | - |
| BJM02_RS18520 () | 3796927..3798188 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| BJM02_RS18525 () | 3798230..3798895 | - | 666 | Protein_3499 | polyprenyl synthetase family protein | - |
| BJM02_RS18530 () | 3799649..3800041 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BJM02_RS18535 () | 3800041..3800316 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BJM02_RS18540 () | 3800528..3801869 | + | 1342 | Protein_3502 | ISNCY family transposase ISRjo3 | Transposase |
| BJM02_RS18545 () | 3802059..3804235 | + | 2177 | Protein_3503 | PE family protein | - |
| BJM02_RS18550 () | 3804306..3805178 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| BJM02_RS18555 () | 3805252..3805962 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |