MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP017595 Location: 3812456..3817398 Organism: Mycobacterium tuberculosis strain Beijing-like/38774 Replicon: chromosome
Accession: NZ_CP017595 Location: 3812456..3817398 Organism: Mycobacterium tuberculosis strain Beijing-like/38774 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJM01_RS18585 () | 3808291..3809181 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| BJM01_RS18590 () | 3809190..3811028 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| BJM01_RS18595 () | 3811025..3812014 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BJM01_RS18600 () | 3812014..3812403 | - | 390 | Protein_3511 | polyprenyl synthetase family protein | - |
| BJM01_RS18605 () | 3812456..3813717 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| BJM01_RS18610 () | 3813759..3814424 | - | 666 | Protein_3513 | polyprenyl synthetase family protein | - |
| BJM01_RS18615 () | 3815178..3815570 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BJM01_RS18620 () | 3815570..3815845 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BJM01_RS18625 () | 3816057..3817398 | + | 1342 | Protein_3516 | ISNCY family transposase ISRjo3 | Transposase |
| BJM01_RS18630 () | 3817588..3819765 | + | 2178 | WP_016330440.1 | PE family protein | - |
| BJM01_RS18635 () | 3819836..3820708 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| BJM01_RS18640 () | 3820782..3821492 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |