MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 23899 bp
Accession: NZ_CP017538 Location: 2605650..2629548 Organism: Mannheimia haemolytica strain 1471 Replicon: chromosome
Accession: NZ_CP017538 Location: 2605650..2629548 Organism: Mannheimia haemolytica strain 1471 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG586_RS13485 () | 2601041..2601328 | - | 288 | WP_006247821.1 | 50S ribosomal protein L25 | - |
| BG586_RS13490 () | 2601480..2602748 | - | 1269 | WP_006247820.1 | malic enzyme | - |
| BG586_RS13495 () | 2602905..2603816 | - | 912 | WP_006247818.1 | RimK family alpha-L-glutamate ligase | - |
| BG586_RS13500 () | 2603813..2604532 | - | 720 | WP_006247817.1 | oxygen-insensitive NADPH nitroreductase | - |
| BG586_RS13505 () | 2604544..2605329 | - | 786 | WP_006250687.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| BG586_RS13510 () | 2605304..2605624 | - | 321 | WP_006247815.1 | trp operon repressor | - |
| BG586_RS13515 () | 2605704..2606345 | - | 642 | WP_006247814.1 | outer membrane lipoprotein chaperone LolA | - |
| BG586_RS13520 () | 2606456..2609314 | - | 2859 | WP_006247813.1 | DNA polymerase I | - |
| BG586_RS13525 () | 2609599..2609892 | - | 294 | WP_006247812.1 | hypothetical protein | - |
| BG586_RS13530 () | 2610036..2610425 | + | 390 | WP_015484247.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BG586_RS13535 () | 2610397..2610696 | + | 300 | WP_006247810.1 | XRE family transcriptional regulator | - |
| BG586_RS13545 () | 2610813..2611853 | + | 1041 | WP_015587043.1 | IS481 family transposase ISShes15 | Transposase |
| BG586_RS14955 () | 2611913..2612071 | - | 159 | WP_006247809.1 | hypothetical protein | - |
| BG586_RS14960 () | 2612081..2613148 | - | 1068 | WP_006253284.1 | hypothetical protein | - |
| BG586_RS13560 () | 2613169..2613369 | - | 201 | WP_006248825.1 | helix-turn-helix domain-containing protein | - |
| BG586_RS13565 () | 2613500..2614183 | + | 684 | WP_006248824.1 | helix-turn-helix transcriptional regulator | - |
| BG586_RS13570 () | 2614258..2614638 | + | 381 | WP_006248823.1 | hypothetical protein | - |
| BG586_RS13575 () | 2614643..2615128 | + | 486 | WP_015484250.1 | hypothetical protein | - |
| BG586_RS13580 () | 2615260..2615442 | + | 183 | WP_006250075.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BG586_RS13585 () | 2615481..2615900 | + | 420 | WP_006250074.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BG586_RS13590 () | 2616236..2616880 | + | 645 | WP_006253274.1 | hypothetical protein ; Integrase | Integrase |
| BG586_RS13600 () | 2617018..2618024 | + | 1007 | Protein_2614 | IS481 family transposase ISVvu4 | Transposase |
| BG586_RS13605 () | 2618091..2619497 | - | 1407 | WP_006253513.1 | YdgA family protein | - |
| BG586_RS13610 () | 2619547..2620353 | - | 807 | WP_006248821.1 | Tryptophan synthase alpha chain ; Integrase | Integrase |
| BG586_RS13615 () | 2620355..2621545 | - | 1191 | WP_006248820.1 | tryptophan synthase subunit beta | - |
| BG586_RS13620 () | 2621557..2622309 | - | 753 | WP_006248819.1 | SDR family oxidoreductase | - |
| BG586_RS13625 () | 2622535..2624067 | - | 1533 | WP_006253512.1 | Na+/H+ antiporter NhaC family protein | - |
| BG586_RS13630 () | 2624504..2624905 | + | 402 | WP_006248816.1 | H-NS histone family protein | - |
| BG586_RS13635 () | 2624975..2625814 | + | 840 | WP_006248815.1 | formyltetrahydrofolate deformylase | - |
| BG586_RS13640 () | 2625851..2626534 | - | 684 | WP_006248814.1 | YdcF family protein | - |
| BG586_RS13645 () | 2626802..2627875 | + | 1074 | WP_006248812.1 | homoserine O-acetyltransferase | - |
| BG586_RS13650 () | 2627953..2629455 | - | 1503 | WP_006248119.1 | lysine--tRNA ligase | - |
| BG586_RS13655 () | 2629609..2631084 | - | 1476 | WP_006248118.1 | ribonuclease G | - |
| BG586_RS13660 () | 2632628..2632921 | - | 294 | WP_006248114.1 | CRISPR-associated endonuclease Cas2 | - |
| BG586_RS13665 () | 2632988..2634001 | - | 1014 | WP_006248113.1 | type I-C CRISPR-associated endonuclease Cas1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|