MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48379 bp
Accession: NZ_CP017454 Location: 828904..877282 Organism: Dickeya solani strain PPO 9019 Replicon: chromosome
Accession: NZ_CP017454 Location: 828904..877282 Organism: Dickeya solani strain PPO 9019 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJJ98_RS03570 () | 824284..824838 | + | 555 | WP_022633140.1 | flavodoxin family protein | - |
| BJJ98_RS03575 () | 824911..825078 | - | 168 | WP_022633139.1 | YqaE/Pmp3 family membrane protein | - |
| BJJ98_RS03580 () | 825506..825895 | + | 390 | WP_023637758.1 | helix-turn-helix domain-containing protein | - |
| BJJ98_RS03585 () | 825929..827080 | + | 1152 | WP_022633138.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| BJJ98_RS03595 () | 827943..828734 | + | 792 | WP_022633137.1 | DgsA anti-repressor MtfA | - |
| BJJ98_RS03605 () | 829081..830363 | + | 1283 | Protein_707 | hypothetical protein ; Integrase | Integrase |
| BJJ98_RS03610 () | 830519..830830 | - | 312 | WP_022633134.1 | DUF736 domain-containing protein | - |
| BJJ98_RS03620 () | 831846..832772 | + | 927 | WP_022633133.1 | hypothetical protein | - |
| BJJ98_RS21960 () | 832934..833080 | - | 147 | WP_155246175.1 | hypothetical protein | - |
| BJJ98_RS03630 () | 833379..834224 | - | 846 | WP_023637756.1 | hypothetical protein | - |
| BJJ98_RS03635 () | 834593..838423 | - | 3831 | Protein_712 | PAAR domain-containing protein | - |
| BJJ98_RS03640 () | 838441..838881 | - | 441 | WP_023637755.1 | DUF1795 domain-containing protein | - |
| BJJ98_RS03645 () | 838959..840821 | - | 1863 | WP_022633129.1 | hypothetical protein | VF |
| BJJ98_RS03650 () | 840934..841452 | - | 519 | WP_022633128.1 | hypothetical protein | VF |
| BJJ98_RS03655 () | 842136..842381 | + | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| BJJ98_RS03660 () | 842659..842946 | - | 288 | WP_022633127.1 | helix-turn-helix domain-containing protein | - |
| BJJ98_RS03665 () | 843080..843358 | + | 279 | WP_012884168.1 | hypothetical protein | VF |
| BJJ98_RS03670 () | 843472..843729 | + | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| BJJ98_RS03675 () | 844405..844599 | + | 195 | WP_022633126.1 | AlpA family transcriptional regulator | - |
| BJJ98_RS03680 () | 844616..845200 | + | 585 | WP_022633125.1 | DUF2857 domain-containing protein | - |
| BJJ98_RS03685 () | 845190..845399 | + | 210 | WP_022633124.1 | TraR/DksA family transcriptional regulator | - |
| BJJ98_RS03690 () | 845663..846547 | - | 885 | WP_022633123.1 | HTH-type transcriptional regulator ArgP | VF |
| BJJ98_RS03695 () | 846679..848076 | + | 1398 | WP_022633122.1 | amidohydrolase family protein | - |
| BJJ98_RS03700 () | 848088..848561 | + | 474 | WP_022633121.1 | DMT family transporter | - |
| BJJ98_RS03705 () | 848644..849510 | + | 867 | WP_022633120.1 | SMP-30/gluconolactonase/LRE family protein | - |
| BJJ98_RS03710 () | 849570..850535 | + | 966 | WP_022633119.1 | aldo/keto reductase | - |
| BJJ98_RS03715 () | 850555..851070 | + | 516 | WP_022633118.1 | NAD(P)H-dependent oxidoreductase | - |
| BJJ98_RS03720 () | 851636..851869 | + | 234 | WP_022633117.1 | hypothetical protein | - |
| BJJ98_RS03725 () | 851939..852586 | + | 648 | WP_022633116.1 | hypothetical protein | VF |
| BJJ98_RS03730 () | 852606..852881 | + | 276 | WP_012769221.1 | hypothetical protein | VF |
| BJJ98_RS03735 () | 852891..855638 | + | 2748 | WP_022633115.1 | hypothetical protein | VF |
| BJJ98_RS03740 () | 855664..856380 | + | 717 | WP_022633114.1 | type IV secretion system protein | - |
| BJJ98_RS03745 () | 856392..856616 | + | 225 | WP_022633113.1 | EexN family lipoprotein | - |
| BJJ98_RS03750 () | 856628..857656 | + | 1029 | WP_022633112.1 | type IV secretion system protein | - |
| BJJ98_RS03755 () | 857877..858560 | + | 684 | WP_022633111.1 | hypothetical protein | VF |
| BJJ98_RS03760 () | 858560..859450 | + | 891 | WP_022633110.1 | P-type conjugative transfer protein VirB9 | - |
| BJJ98_RS03765 () | 859447..860655 | + | 1209 | Protein_738 | hypothetical protein | VF |
| BJJ98_RS03770 () | 860645..861661 | + | 1017 | WP_022633107.1 | hypothetical protein | VF |
| BJJ98_RS03775 () | 861702..862004 | + | 303 | WP_022633106.1 | KikA | - |
| BJJ98_RS03785 () | 862701..864464 | + | 1764 | Protein_741 | type IV secretory system conjugative DNA transfer family protein | - |
| BJJ98_RS03790 () | 864473..865219 | + | 747 | WP_022633104.1 | hypothetical protein | - |
| BJJ98_RS03800 () | 865602..866009 | + | 408 | WP_071598628.1 | helix-turn-helix transcriptional regulator | - |
| BJJ98_RS03805 () | 866009..867316 | + | 1308 | WP_022633103.1 | type II toxin-antitoxin system HipA family toxin | - |
| BJJ98_RS03810 () | 867492..867749 | + | 258 | WP_022633102.1 | hypothetical protein | - |
| BJJ98_RS03815 () | 867746..868060 | - | 315 | WP_022633101.1 | CcdB family protein | Toxin Detail |
| BJJ98_RS03820 () | 868063..868299 | - | 237 | WP_022633100.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| BJJ98_RS03825 () | 868620..869564 | - | 945 | WP_022633099.1 | DUF1738 domain-containing protein | - |
| BJJ98_RS21965 () | 869955..870248 | + | 294 | WP_146053334.1 | hypothetical protein | - |
| BJJ98_RS03830 () | 870312..870713 | + | 402 | WP_023637748.1 | hypothetical protein | - |
| BJJ98_RS03835 () | 871074..872723 | - | 1650 | WP_022633097.1 | hypothetical protein | - |
| BJJ98_RS03840 () | 872725..875724 | - | 3000 | WP_080644163.1 | ATP-binding protein | - |
| BJJ98_RS03845 () | 875687..876751 | - | 1065 | WP_026594454.1 | DNA cytosine methyltransferase | - |
| BJJ98_RS21970 () | 878214..878501 | + | 288 | WP_146053333.1 | hypothetical protein | - |
| BJJ98_RS03850 () | 878903..880120 | + | 1218 | WP_022633094.1 | dienelactone hydrolase family protein | - |
| BJJ98_RS03855 () | 880035..880910 | + | 876 | WP_026594453.1 | alpha/beta hydrolase | - |
| BJJ98_RS03860 () | 881322..881996 | - | 675 | WP_022633092.1 | glutathione S-transferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|