MGE detailed information
MGE type: Genomic_island MGE length: 21210 bp
Accession: NZ_CP017446 Location: 4712472..4733681 Organism: Escherichia coli O157:H7 strain 9234 Replicon: chromosome
Accession: NZ_CP017446 Location: 4712472..4733681 Organism: Escherichia coli O157:H7 strain 9234 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4C47_RS24245 () | 4708198..4708740 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| A4C47_RS24255 () | 4709033..4711183 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A4C47_RS24260 () | 4711233..4711436 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A4C47_RS24265 () | 4711447..4712403 | + | 957 | WP_001459238.1 | GTPase | - |
| A4C47_RS24270 () | 4712472..4713830 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A4C47_RS24275 () | 4713839..4714123 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A4C47_RS24280 () | 4714401..4716833 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A4C47_RS24285 () | 4716900..4718369 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A4C47_RS24290 () | 4718369..4720123 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4720273..4720349 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4720273..4720349 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4720273..4720349 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4720273..4720349 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4720273..4720349 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4720273..4720349 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4720273..4720349 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4720273..4720349 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| A4C47_RS24295 () | 4720344..4720685 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| A4C47_RS30215 () | 4720732..4721895 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A4C47_RS24305 () | 4721943..4722824 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A4C47_RS24310 () | 4722921..4723085 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A4C47_RS24315 () | 4723262..4724674 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A4C47_RS31690 () | 4724917..4725117 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| A4C47_RS24320 () | 4725122..4725874 | - | 753 | Protein_4595 | Recombination-promoting nuclease RpnD | VF |
| A4C47_RS24325 () | 4726341..4727573 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A4C47_RS24330 () | 4727614..4728885 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A4C47_RS24335 () | 4729001..4730152 | + | 1152 | WP_001459237.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A4C47_RS24340 () | 4730162..4730929 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| A4C47_RS24345 () | 4730926..4731192 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A4C47_RS24350 () | 4731504..4733681 | + | 2178 | WP_000535056.1 | hypothetical protein | VF |
| A4C47_RS24355 () | 4733947..4734789 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| A4C47_RS24360 () | 4734857..4736035 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |