MGE detailed information
MGE type: Prophage MGE length: 112955 bp
Accession: NZ_CP017440 Location: 2435379..2548333 Organism: Escherichia coli O157:H7 strain 3384 Replicon: chromosome
Accession: NZ_CP017440 Location: 2435379..2548333 Organism: Escherichia coli O157:H7 strain 3384 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4C38_RS12395 () | 2431279..2432499 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| A4C38_RS12400 () | 2432624..2433319 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| A4C38_RS12405 () | 2433272..2434564 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| A4C38_RS12410 () | 2434722..2435336 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| A4C38_RS12415 () | 2435379..2436233 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| A4C38_RS12420 () | 2436235..2436852 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| A4C38_RS12425 () | 2436863..2439286 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| A4C38_RS12430 () | 2439347..2441773 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| A4C38_RS12435 () | 2441972..2442277 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| A4C38_RS12440 () | 2442385..2443095 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| A4C38_RS12445 () | 2443098..2443658 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| A4C38_RS12450 () | 2443693..2444034 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| A4C38_RS12455 () | 2444169..2444495 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| A4C38_RS12460 () | 2444767..2445449 | - | 683 | Protein_2366 | DUF3596 domain-containing protein | - |
| A4C38_RS12465 () | 2445484..2445735 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| A4C38_RS12470 () | 2445808..2448279 | - | 2472 | WP_000048458.1 | exonuclease | - |
| A4C38_RS12475 () | 2448372..2448563 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| A4C38_RS12480 () | 2448560..2448748 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| A4C38_RS12485 () | 2449317..2449535 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| A4C38_RS12490 () | 2449607..2449906 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| A4C38_RS12500 () | 2450259..2450537 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A4C38_RS12505 () | 2450539..2450730 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| A4C38_RS29235 () | 2450751..2451122 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| A4C38_RS12515 () | 2451220..2451522 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| A4C38_RS12520 () | 2451519..2451944 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| A4C38_RS12525 () | 2451967..2452929 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| A4C38_RS12530 () | 2452936..2453676 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| A4C38_RS12540 () | 2453702..2454471 | + | 770 | Protein_2380 | DUF1627 domain-containing protein | - |
| A4C38_RS12545 () | 2454487..2454882 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| A4C38_RS12550 () | 2454939..2455523 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| A4C38_RS29240 () | 2455639..2455743 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| A4C38_RS12560 () | 2455989..2456144 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| A4C38_RS29245 () | 2456312..2456590 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| A4C38_RS12570 () | 2456592..2457641 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| A4C38_RS12575 () | 2457654..2458013 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A4C38_RS12580 () | 2458010..2458699 | + | 690 | WP_001059381.1 | antiterminator | - |
| A4C38_RS12600 () | 2459338..2459766 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| A4C38_RS12605 () | 2459763..2460018 | + | 256 | Protein_2390 | DUF3927 family protein | - |
| A4C38_RS12615 () | 2460245..2462095 | + | 1851 | WP_070081082.1 | SASA family carbohydrate esterase | - |
| A4C38_RS12625 () | 2462535..2462750 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| A4C38_RS12630 () | 2462755..2463099 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| A4C38_RS12635 () | 2463150..2463683 | + | 534 | WP_000992137.1 | lysozyme | - |
| A4C38_RS12640 () | 2463954..2464523 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| A4C38_RS31120 () | 2464523..2464669 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| A4C38_RS31130 () | 2464897..2465082 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| A4C38_RS12655 () | 2465507..2465734 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| A4C38_RS12660 () | 2465776..2466141 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| A4C38_RS12670 () | 2466431..2466994 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| A4C38_RS12675 () | 2466991..2468652 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| A4C38_RS12680 () | 2468716..2470653 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| A4C38_RS12685 () | 2470698..2470919 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| A4C38_RS12690 () | 2470865..2473444 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| A4C38_RS12695 () | 2473447..2473773 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| A4C38_RS12700 () | 2473783..2474133 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| A4C38_RS12705 () | 2474130..2474576 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| A4C38_RS12710 () | 2474573..2474917 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| A4C38_RS12715 () | 2474983..2475699 | + | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| A4C38_RS12720 () | 2475714..2476088 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| A4C38_RS12725 () | 2476184..2476393 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| A4C38_RS12730 () | 2476441..2479683 | + | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| A4C38_RS12735 () | 2479676..2480017 | + | 342 | WP_000807954.1 | phage tail protein | - |
| A4C38_RS12740 () | 2480017..2480715 | + | 699 | WP_001179481.1 | phage minor tail protein L | - |
| A4C38_RS12745 () | 2480726..2481469 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| A4C38_RS12750 () | 2481415..2482047 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| A4C38_RS29265 () | 2482389..2483593 | + | 1205 | Protein_2417 | host specificity protein J | - |
| A4C38_RS31975 () | 2483684..2485180 | + | 1497 | Protein_2418 | host specificity protein J | - |
| A4C38_RS31980 () | 2485208..2485863 | + | 656 | Protein_2419 | host specificity protein J | - |
| A4C38_RS12765 () | 2485931..2486530 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| A4C38_RS12770 () | 2486595..2487818 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A4C38_RS12775 () | 2487820..2488089 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| A4C38_RS12780 () | 2488203..2488778 | + | 576 | Protein_2423 | hypothetical protein | VF |
| A4C38_RS31135 () | 2489489..2490139 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| A4C38_RS12795 () | 2490289..2490684 | + | 396 | Protein_2425 | IS256 family transposase ISEic2 | Transposase |
| A4C38_RS12800 () | 2490722..2492260 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| A4C38_RS12805 () | 2492310..2492657 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| A4C38_RS12810 () | 2492654..2493034 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| A4C38_RS29280 () | 2493129..2493947 | + | 819 | Protein_2429 | IS256 family transposase IS1414 | Transposase |
| A4C38_RS12820 () | 2493997..2494239 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| A4C38_RS12825 () | 2494417..2494968 | - | 552 | Protein_2431 | Putative defective protein IntQ ; Integrase | Integrase |
| A4C38_RS12830 () | 2494956..2496194 | - | 1239 | Protein_2432 | exonuclease | - |
| A4C38_RS12835 () | 2496287..2496475 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| A4C38_RS12840 () | 2496472..2496660 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| A4C38_RS12850 () | 2497225..2497434 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| A4C38_RS12855 () | 2497435..2498073 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| A4C38_RS12860 () | 2498085..2498237 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| A4C38_RS31140 () | 2498530..2498868 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| A4C38_RS12870 () | 2499260..2499502 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| A4C38_RS12875 () | 2499486..2499911 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| A4C38_RS31145 () | 2499980..2501023 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| A4C38_RS31150 () | 2501016..2501477 | + | 462 | WP_000139447.1 | replication protein | - |
| A4C38_RS12890 () | 2501511..2502227 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| A4C38_RS12895 () | 2502260..2502541 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| A4C38_RS12900 () | 2502538..2502765 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| A4C38_RS12905 () | 2502758..2503069 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| A4C38_RS12910 () | 2503197..2503415 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| A4C38_RS12915 () | 2503417..2503974 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| A4C38_RS12920 () | 2504265..2504420 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| A4C38_RS12925 () | 2504540..2504884 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| A4C38_RS12930 () | 2505006..2505278 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| A4C38_RS12935 () | 2505280..2506329 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| A4C38_RS12940 () | 2506342..2506647 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A4C38_RS12945 () | 2506710..2507264 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| A4C38_RS31155 () | 2507489..2507686 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| A4C38_RS12955 () | 2507822..2508535 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| A4C38_RS12970 () | 2508986..2509417 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| A4C38_RS12975 () | 2509414..2509669 | + | 256 | Protein_2458 | DUF3927 family protein | - |
| A4C38_RS12980 () | 2509895..2511745 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| A4C38_RS12990 () | 2512184..2512399 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| A4C38_RS12995 () | 2512404..2512748 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| A4C38_RS13000 () | 2512799..2513332 | + | 534 | WP_000992137.1 | lysozyme | - |
| A4C38_RS13005 () | 2513603..2514172 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| A4C38_RS31160 () | 2514172..2514318 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| A4C38_RS31165 () | 2514541..2514726 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| A4C38_RS13020 () | 2515252..2515566 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| A4C38_RS13025 () | 2515648..2515872 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| A4C38_RS13030 () | 2516259..2516804 | + | 546 | WP_000867493.1 | terminase small subunit | - |
| A4C38_RS13035 () | 2516779..2518704 | + | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| A4C38_RS13040 () | 2518701..2518907 | + | 207 | WP_000198153.1 | gpW family protein | - |
| A4C38_RS13045 () | 2518904..2520505 | + | 1602 | WP_070081084.1 | phage portal protein | - |
| A4C38_RS13050 () | 2520486..2521805 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| A4C38_RS13055 () | 2521815..2522147 | + | 333 | WP_001295978.1 | head decoration protein | - |
| A4C38_RS13060 () | 2522203..2523228 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| A4C38_RS13065 () | 2523270..2523668 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| A4C38_RS13070 () | 2523680..2524033 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| A4C38_RS13075 () | 2524048..2524581 | + | 534 | WP_000975020.1 | phage tail protein | - |
| A4C38_RS13080 () | 2524578..2524973 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| A4C38_RS13085 () | 2524981..2525733 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| A4C38_RS13090 () | 2525747..2526169 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| A4C38_RS13095 () | 2526196..2526609 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| A4C38_RS13100 () | 2526590..2529202 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| A4C38_RS13105 () | 2529199..2529528 | + | 330 | WP_000847298.1 | phage tail protein | - |
| A4C38_RS13110 () | 2529528..2530226 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| A4C38_RS13115 () | 2530237..2530980 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| A4C38_RS13120 () | 2530926..2531555 | + | 630 | WP_072147834.1 | tail assembly protein | - |
| A4C38_RS13125 () | 2531796..2535275 | + | 3480 | WP_000514945.1 | host specificity protein J | - |
| A4C38_RS13130 () | 2535343..2535942 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| A4C38_RS13135 () | 2536007..2537230 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A4C38_RS13140 () | 2537232..2537501 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| A4C38_RS13145 () | 2537615..2538190 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| A4C38_RS29315 () | 2538263..2538892 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| A4C38_RS13155 () | 2538974..2539615 | + | 642 | WP_001143808.1 | hypothetical protein | VF |
| A4C38_RS13160 () | 2539777..2540019 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| A4C38_RS13165 () | 2540151..2541434 | + | 1284 | Protein_2495 | MHS family MFS transporter YdfJ | - |
| A4C38_RS13170 () | 2541523..2542983 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| A4C38_RS13175 () | 2543019..2543222 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| A4C38_RS13180 () | 2543399..2544085 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| A4C38_RS13185 () | 2544174..2544920 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| A4C38_RS13190 () | 2545057..2547102 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| A4C38_RS13195 () | 2547147..2547665 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| A4C38_RS13200 () | 2547941..2548333 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| A4C38_RS13205 () | 2548588..2549478 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| A4C38_RS31985 () | 2549593..2549697 | - | 105 | WP_211180496.1 | protein MgtT | - |
| A4C38_RS13210 () | 2549697..2549792 | - | 96 | WP_000901365.1 | protein MgtS | - |
| A4C38_RS13215 () | 2549900..2550871 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| A4C38_RS13220 () | 2550966..2551361 | + | 396 | WP_001271101.1 | rhodanese | - |
| A4C38_RS13225 () | 2551402..2552589 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.005 |