MGE detailed information
MGE type: Genomic_island MGE length: 21210 bp
Accession: NZ_CP017438 Location: 4718509..4739718 Organism: Escherichia coli O157:H7 strain 2159 Replicon: chromosome
Accession: NZ_CP017438 Location: 4718509..4739718 Organism: Escherichia coli O157:H7 strain 2159 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4C45_RS24290 () | 4714235..4714777 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| A4C45_RS24300 () | 4715070..4717220 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A4C45_RS24305 () | 4717270..4717473 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A4C45_RS24310 () | 4717484..4718440 | + | 957 | WP_001459238.1 | GTPase | - |
| A4C45_RS24315 () | 4718509..4719867 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A4C45_RS24320 () | 4719876..4720160 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A4C45_RS24325 () | 4720438..4722870 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A4C45_RS24330 () | 4722937..4724406 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A4C45_RS24335 () | 4724406..4726160 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4726310..4726386 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4726310..4726386 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4726310..4726386 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4726310..4726386 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4726310..4726386 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4726310..4726386 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4726310..4726386 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4726310..4726386 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| A4C45_RS24340 () | 4726381..4726722 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| A4C45_RS30260 () | 4726769..4727932 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A4C45_RS24350 () | 4727980..4728861 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A4C45_RS24355 () | 4728958..4729122 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A4C45_RS24360 () | 4729299..4730711 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A4C45_RS31770 () | 4730954..4731154 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| A4C45_RS24365 () | 4731159..4731911 | - | 753 | Protein_4601 | Recombination-promoting nuclease RpnD | VF |
| A4C45_RS24370 () | 4732378..4733610 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A4C45_RS24375 () | 4733651..4734922 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A4C45_RS24380 () | 4735038..4736189 | + | 1152 | WP_001459237.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A4C45_RS24385 () | 4736199..4736966 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| A4C45_RS24390 () | 4736963..4737229 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A4C45_RS24395 () | 4737541..4739718 | + | 2178 | WP_000535056.1 | hypothetical protein | VF |
| A4C45_RS24400 () | 4739984..4740826 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| A4C45_RS24405 () | 4740894..4742072 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |