MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 51784 bp
Accession: NZ_CP017407 Location: 1..51784 Organism: Lactiplantibacillus plantarum strain RI-113 Replicon: plasmid pRI113_1
Accession: NZ_CP017407 Location: 1..51784 Organism: Lactiplantibacillus plantarum strain RI-113 Replicon: plasmid pRI113_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD88_RS15925 () | 379..2321 | - | 1943 | Protein_1 | MFS transporter | - |
| BJD88_RS15930 () | 2340..3941 | - | 1602 | Protein_2 | beta-galactosidase | - |
| BJD88_RS17320 () | 4767..5159 | - | 393 | Protein_4 | galactokinase | - |
| BJD88_RS15955 () | 5367..7247 | + | 1881 | WP_077143513.1 | beta-galactosidase | - |
| BJD88_RS15960 () | 7231..8190 | + | 960 | WP_016511057.1 | beta-galactosidase small subunit | - |
| BJD88_RS15965 () | 8285..10123 | - | 1839 | Protein_7 | alpha-galactosidase | - |
| BJD88_RS15970 () | 10140..10664 | - | 525 | Protein_8 | glycoside hydrolase family 1 protein | - |
| BJD88_RS15975 () | 10705..11316 | + | 612 | WP_077143522.1 | Collagen adhesin | VF |
| BJD88_RS17495 () | 11620..11814 | - | 195 | WP_076633024.1 | transposase | - |
| BJD88_RS15985 () | 11826..13205 | - | 1380 | WP_015639791.1 | FAD-dependent oxidoreductase | - |
| BJD88_RS17500 () | 13710..13799 | + | 90 | WP_021353390.1 | putative holin-like toxin | - |
| BJD88_RS15995 () | 13956..14135 | - | 180 | WP_003646559.1 | hypothetical protein | - |
| BJD88_RS16000 () | 14193..16253 | - | 2061 | WP_077143515.1 | Mobilization protein A | Relaxase |
| BJD88_RS16005 () | 16524..16733 | + | 210 | WP_054397531.1 | hypothetical protein | - |
| BJD88_RS16010 () | 16753..17043 | + | 291 | WP_054397396.1 | hypothetical protein | - |
| BJD88_RS17505 () | 17101..17466 | - | 366 | Protein_17 | SAM-dependent methyltransferase | - |
| BJD88_RS16025 () | 17567..18496 | + | 930 | WP_077143517.1 | IS30 family transposase ISLpl1 | Transposase |
| BJD88_RS16030 () | 18538..18721 | + | 184 | Protein_19 | hypothetical protein | - |
| BJD88_RS16035 () | 19306..19584 | - | 279 | WP_076632997.1 | BRCT domain-containing protein | - |
| BJD88_RS16050 () | 20593..21453 | + | 861 | WP_013356270.1 | ParA family protein | - |
| BJD88_RS16055 () | 21455..21754 | + | 300 | WP_048481076.1 | hypothetical protein | - |
| BJD88_RS17510 () | 21803..21991 | - | 189 | Protein_23 | IS30 family transposase | - |
| BJD88_RS16065 () | 22073..22324 | + | 252 | WP_002816285.1 | IS3 family transposase IS153 | Transposase |
| BJD88_RS16070 () | 22378..23139 | + | 762 | WP_077143518.1 | IS3 family transposase ISBce13 | Transposase |
| BJD88_RS16075 () | 23455..24225 | + | 771 | WP_045353665.1 | Cof-type HAD-IIB family hydrolase | - |
| BJD88_RS16080 () | 24345..25016 | - | 672 | WP_039098360.1 | beta-phosphoglucomutase | - |
| BJD88_RS16085 () | 25035..27752 | - | 2718 | WP_076632922.1 | glycoside hydrolase family 65 protein | - |
| BJD88_RS16095 () | 27999..28370 | + | 372 | WP_143447787.1 | hypothetical protein | - |
| BJD88_RS16100 () | 28585..29166 | + | 582 | WP_014940888.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| BJD88_RS16105 () | 29252..29929 | + | 678 | Protein_31 | ISL3 family transposase IS1165 | Transposase |
| BJD88_RS16115 () | 30338..32077 | - | 1740 | WP_076633040.1 | pyruvate oxidase | - |
| BJD88_RS16120 () | 32270..33130 | - | 861 | WP_049144758.1 | ABC transporter permease | - |
| BJD88_RS16125 () | 33132..33995 | - | 864 | WP_053089774.1 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA | VF |
| BJD88_RS16130 () | 34044..34628 | - | 585 | WP_076633053.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| BJD88_RS16140 () | 35089..35888 | + | 800 | WP_155295634.1 | IS5 family transposase ISCaa8 | Transposase |
| BJD88_RS16145 () | 36137..37084 | + | 948 | WP_064620381.1 | IS30 family transposase ISApl1 | Transposase |
| BJD88_RS16150 () | 37387..38028 | - | 642 | WP_076632982.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| BJD88_RS16155 () | 38018..38932 | - | 915 | WP_064620498.1 | putative heme-iron transport system permease protein IsdF | VF |
| BJD88_RS16160 () | 38913..39803 | - | 891 | WP_076632983.1 | High-affinity heme uptake system protein IsdE | VF |
| BJD88_RS16165 () | 39787..40611 | - | 825 | WP_064620504.1 | NEAT domain-containing protein | - |
| BJD88_RS16170 () | 40604..42706 | - | 2103 | WP_076632984.1 | hypothetical protein | - |
| BJD88_RS16175 () | 43069..44328 | + | 1260 | WP_064620510.1 | cytochrome P450 | - |
| BJD88_RS16180 () | 44647..44991 | - | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BJD88_RS16185 () | 44985..45248 | - | 264 | WP_003643337.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BJD88_RS16190 () | 45334..45921 | + | 588 | WP_076632985.1 | site-specific integrase | - |
| BJD88_RS16200 () | 46240..47039 | + | 800 | WP_088899809.1 | IS5 family transposase ISCaa8 | Transposase |
| BJD88_RS16205 () | 46999..47376 | - | 378 | WP_077143520.1 | hypothetical protein | - |
| BJD88_RS16215 () | 48427..49215 | + | 789 | WP_003645724.1 | Sporulation initiation inhibitor protein Soj | VF |
| BJD88_RS16220 () | 49208..49441 | + | 234 | WP_015639781.1 | hypothetical protein | - |
| BJD88_RS17710 () | 49546..49683 | + | 138 | WP_015639780.1 | hypothetical protein | - |
| BJD88_RS16230 () | 50890..51570 | - | 681 | WP_077143521.1 | IS6 family transposase IS1297 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|